Wall clock time and date at job start Tue Mar 31 2020 20:39:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.46498 * 120.00232 * 2 1 4 4 C 1.50694 * 109.47369 * 89.99890 * 3 2 1 5 5 H 1.07997 * 120.00119 * 359.97438 * 4 3 2 6 6 C 1.37876 * 119.99893 * 180.02562 * 4 3 2 7 7 N 1.31510 * 120.00322 * 359.97438 * 6 4 3 8 8 Si 1.86801 * 120.00126 * 179.97438 * 6 4 3 9 9 H 1.48502 * 109.47015 * 359.97438 * 8 6 4 10 10 H 1.48496 * 109.47375 * 119.99199 * 8 6 4 11 11 H 1.48494 * 109.47315 * 239.99648 * 8 6 4 12 12 C 1.34786 * 119.99612 * 179.97438 * 2 1 3 13 13 O 1.21559 * 119.99290 * 185.46471 * 12 2 1 14 14 C 1.47798 * 120.00066 * 5.46927 * 12 2 1 15 15 N 1.32297 * 120.59115 * 5.75459 * 14 12 2 16 16 C 1.32719 * 121.20745 * 179.80145 * 15 14 12 17 17 C 1.35457 * 122.11932 * 0.46890 * 16 15 14 18 18 N 1.36270 * 120.51555 * 359.78152 * 17 16 15 19 19 C 1.36159 * 133.93689 * 180.02562 * 18 17 16 20 20 Br 1.89101 * 126.43037 * 0.02562 * 19 18 17 21 21 C 1.35424 * 107.13498 * 179.97438 * 19 18 17 22 22 N 1.33599 * 108.60782 * 359.97438 * 21 19 18 23 23 C 1.31827 * 109.15117 * 0.02562 * 22 21 19 24 24 H 1.09001 * 109.46626 * 95.32576 * 1 2 3 25 25 H 1.09000 * 109.47467 * 215.32832 * 1 2 3 26 26 H 1.08999 * 109.47014 * 335.32714 * 1 2 3 27 27 H 1.09004 * 109.46851 * 209.99834 * 3 2 1 28 28 H 1.09000 * 109.47035 * 329.99420 * 3 2 1 29 29 H 0.96999 * 120.00551 * 180.02562 * 7 6 4 30 30 H 1.07999 * 118.93945 * 180.24960 * 16 15 14 31 31 H 1.07999 * 119.73621 * 179.80401 * 17 16 15 32 32 H 1.08002 * 125.69691 * 179.97438 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1976 1.2687 0.0000 4 6 2.4487 1.7037 1.4207 5 1 2.0975 1.0963 2.2416 6 6 3.1261 2.8779 1.6726 7 7 3.5534 3.6180 0.6730 8 14 3.4369 3.4177 3.4337 9 1 2.8589 2.4177 4.3672 10 1 4.8993 3.5262 3.6675 11 1 2.7990 4.7383 3.6666 12 6 2.1389 -1.1673 0.0005 13 8 3.3503 -1.1696 0.1008 14 6 1.4049 -2.4444 -0.1209 15 7 0.1009 -2.4529 -0.3441 16 6 -0.5697 -3.5924 -0.4592 17 6 0.0357 -4.7989 -0.3462 18 7 1.3755 -4.8815 -0.1113 19 6 2.2449 -5.9174 0.0463 20 35 1.8209 -7.7591 -0.0186 21 6 3.4704 -5.3812 0.2573 22 7 3.3635 -4.0497 0.2305 23 6 2.1062 -3.7212 0.0093 24 1 -0.3632 -0.0954 -1.0233 25 1 -0.3634 -0.8384 0.5942 26 1 -0.3633 0.9338 0.4290 27 1 3.1500 1.1382 -0.5138 28 1 1.6085 2.0283 -0.5139 29 1 4.0303 4.4439 0.8502 30 1 -1.6329 -3.5566 -0.6453 31 1 -0.5480 -5.7023 -0.4434 32 1 4.3820 -5.9370 0.4200 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000271216920.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:39:23 Heat of formation + Delta-G solvation = 100.944754 kcal Electronic energy + Delta-G solvation = -20671.093902 eV Core-core repulsion = 17295.062267 eV Total energy + Delta-G solvation = -3376.031635 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 338.012 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -43.26714 -39.40039 -38.16326 -34.86661 -34.56454 -32.57562 -32.23020 -30.73197 -28.99357 -27.81736 -26.24237 -24.99647 -23.44645 -23.07091 -21.95724 -19.52936 -18.70942 -17.52645 -16.68293 -16.42769 -15.97311 -15.75816 -15.43985 -14.70338 -14.54122 -14.16950 -14.07666 -13.70745 -13.11454 -12.69746 -12.38470 -12.06727 -11.97984 -11.76928 -11.37733 -11.24675 -11.19899 -10.85945 -10.59770 -10.27757 -10.14840 -9.96899 -9.57776 -9.16683 -9.11835 -8.42671 -8.40980 -7.63843 -6.01732 -4.06187 -0.07083 0.71250 0.77880 2.12811 2.43701 2.89677 3.28646 3.33568 3.41306 3.46370 3.78356 3.85704 3.98161 4.11731 4.45960 4.53458 4.76145 4.93260 5.06724 5.32089 5.35891 5.68633 6.00253 6.05776 6.20407 6.30868 6.50355 7.01427 7.23017 7.40699 7.48062 7.54788 7.94327 8.23078 8.31043 8.84355 9.01426 9.58532 11.06425 Molecular weight = 338.01amu Principal moments of inertia in cm(-1) A = 0.025911 B = 0.002955 C = 0.002782 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1080.368172 B = 9472.491220 C =10062.081958 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.090 3.910 2 N -0.573 5.573 3 C 0.245 3.755 4 C -0.525 4.525 5 H 0.059 0.941 6 C 0.062 3.938 7 N -0.895 5.895 8 Si 0.899 3.101 9 H -0.273 1.273 10 H -0.282 1.282 11 H -0.284 1.284 12 C 0.550 3.450 13 O -0.494 6.494 14 C 0.201 3.799 15 N -0.420 5.420 16 C 0.040 3.960 17 C 0.016 3.984 18 N -0.342 5.342 19 C -0.078 4.078 20 Br 0.029 6.971 21 C 0.082 3.918 22 N -0.421 5.421 23 C 0.217 3.783 24 H 0.050 0.950 25 H 0.075 0.925 26 H 0.067 0.933 27 H 0.046 0.954 28 H 0.039 0.961 29 H 0.263 0.737 30 H 0.187 0.813 31 H 0.173 0.827 32 H 0.197 0.803 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.463 -24.314 -3.696 26.727 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.054 4.054 2 N -0.304 5.304 3 C 0.126 3.874 4 C -0.564 4.564 5 H 0.078 0.922 6 C -0.140 4.140 7 N -0.534 5.534 8 Si 0.727 3.273 9 H -0.198 1.198 10 H -0.208 1.208 11 H -0.210 1.210 12 C 0.332 3.668 13 O -0.367 6.367 14 C 0.036 3.964 15 N -0.136 5.136 16 C -0.100 4.100 17 C -0.110 4.110 18 N -0.016 5.016 19 C -0.271 4.271 20 Br 0.111 6.889 21 C -0.075 4.075 22 N -0.140 5.140 23 C -0.032 4.032 24 H 0.068 0.932 25 H 0.094 0.906 26 H 0.085 0.915 27 H 0.064 0.936 28 H 0.057 0.943 29 H 0.073 0.927 30 H 0.204 0.796 31 H 0.190 0.810 32 H 0.214 0.786 Dipole moment (debyes) X Y Z Total from point charges -9.851 -23.584 -3.711 25.826 hybrid contribution -0.236 -0.869 0.909 1.280 sum -10.088 -24.453 -2.802 26.600 Atomic orbital electron populations 1.21956 0.79955 1.02345 1.01115 1.48098 1.07258 1.06718 1.68358 1.19448 0.92601 0.77412 0.97892 1.21442 1.36539 1.06266 0.92122 0.92250 1.24921 0.95289 0.96341 0.97495 1.69935 1.38401 1.14356 1.30670 0.86424 0.78116 0.78233 0.84552 1.19793 1.20822 1.20995 1.17203 0.86826 0.81759 0.80977 1.90896 1.12241 1.85327 1.48212 1.23052 0.88264 0.91151 0.93977 1.68864 1.06016 1.28402 1.10363 1.22338 1.01785 0.85586 1.00306 1.22745 0.82058 1.02465 1.03700 1.42700 1.07541 1.07940 1.43468 1.22827 0.92418 0.87389 1.24463 1.96757 1.94609 0.99273 1.98213 1.22913 0.95718 0.90018 0.98850 1.70888 1.13818 1.11718 1.17565 1.22694 0.88066 0.86855 1.05554 0.93179 0.90650 0.91472 0.93580 0.94298 0.92737 0.79604 0.80955 0.78639 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 1.53 9.14 59.85 0.55 2.07 16 2 N -0.57 -12.64 2.86 -184.09 -0.53 -13.17 16 3 C 0.24 6.44 5.10 -5.20 -0.03 6.42 16 4 C -0.52 -15.01 9.39 -34.44 -0.32 -15.34 16 5 H 0.06 1.71 7.81 -52.49 -0.41 1.30 16 6 C 0.06 1.77 5.46 -17.82 -0.10 1.67 16 7 N -0.89 -26.60 13.29 55.43 0.74 -25.86 16 8 Si 0.90 22.09 29.54 -169.99 -5.02 17.06 16 9 H -0.27 -6.65 7.11 56.52 0.40 -6.25 16 10 H -0.28 -6.94 7.11 56.52 0.40 -6.54 16 11 H -0.28 -6.76 7.11 56.52 0.40 -6.36 16 12 C 0.55 12.32 7.65 -12.35 -0.09 12.22 16 13 O -0.49 -13.04 15.89 5.31 0.08 -12.95 16 14 C 0.20 3.58 6.77 -80.54 -0.55 3.03 16 15 N -0.42 -5.89 6.34 -8.68 -0.06 -5.94 16 16 C 0.04 0.38 11.01 -18.16 -0.20 0.18 16 17 C 0.02 0.15 10.98 -16.57 -0.18 -0.03 16 18 N -0.34 -4.49 2.95 -59.35 -0.18 -4.66 16 19 C -0.08 -0.93 7.50 -16.64 -0.12 -1.06 16 20 Br 0.03 0.25 34.09 -68.01 -2.32 -2.07 16 21 C 0.08 1.11 11.81 -17.79 -0.21 0.90 16 22 N -0.42 -7.64 10.75 -11.24 -0.12 -7.76 16 23 C 0.22 3.72 7.67 -153.93 -1.18 2.54 16 24 H 0.05 0.75 8.03 -51.93 -0.42 0.33 16 25 H 0.08 1.17 5.77 -51.93 -0.30 0.87 16 26 H 0.07 1.14 8.03 -51.93 -0.42 0.72 16 27 H 0.05 1.35 7.50 -51.93 -0.39 0.96 16 28 H 0.04 1.02 8.07 -51.93 -0.42 0.60 16 29 H 0.26 7.36 8.31 -40.82 -0.34 7.02 16 30 H 0.19 0.96 8.06 -52.49 -0.42 0.54 16 31 H 0.17 1.00 8.06 -52.49 -0.42 0.57 16 32 H 0.20 1.91 8.06 -52.49 -0.42 1.49 16 LS Contribution 307.19 15.07 4.63 4.63 Total: -1.00 -34.92 307.19 -7.96 -42.88 By element: Atomic # 1 Polarization: -2.00 SS G_CDS: -2.76 Total: -4.75 kcal Atomic # 6 Polarization: 15.05 SS G_CDS: -2.44 Total: 12.61 kcal Atomic # 7 Polarization: -57.26 SS G_CDS: -0.14 Total: -57.40 kcal Atomic # 8 Polarization: -13.04 SS G_CDS: 0.08 Total: -12.95 kcal Atomic # 14 Polarization: 22.09 SS G_CDS: -5.02 Total: 17.06 kcal Atomic # 35 Polarization: 0.25 SS G_CDS: -2.32 Total: -2.07 kcal Total LS contribution 4.63 Total: 4.63 kcal Total: -34.92 -7.96 -42.88 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000271216920.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 143.822 kcal (2) G-P(sol) polarization free energy of solvation -34.918 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 108.903 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.959 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.877 kcal (6) G-S(sol) free energy of system = (1) + (5) 100.945 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds