Wall clock time and date at job start Tue Mar 31 2020 20:15:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17394 * 1 3 3 C 1.47197 * 179.97438 * 2 1 4 4 N 1.46499 * 109.47342 * 317.90509 * 3 2 1 5 5 C 1.36906 * 120.00147 * 83.29893 * 4 3 2 6 6 H 1.07999 * 120.00143 * 166.19560 * 5 4 3 7 7 C 1.39017 * 119.99696 * 346.19549 * 5 4 3 8 8 N 1.31376 * 120.00395 * 359.70731 * 7 5 4 9 9 Si 1.86802 * 119.99949 * 179.70473 * 7 5 4 10 10 H 1.48495 * 109.47101 * 59.99936 * 9 7 5 11 11 H 1.48504 * 109.47369 * 180.02562 * 9 7 5 12 12 H 1.48503 * 109.47046 * 300.00163 * 9 7 5 13 13 C 1.34780 * 119.99847 * 263.29688 * 4 3 2 14 14 O 1.21622 * 119.99915 * 184.37791 * 13 4 3 15 15 C 1.47508 * 120.00276 * 4.38130 * 13 4 3 16 16 C 1.40344 * 120.49978 * 300.67668 * 15 13 4 17 17 C 1.38010 * 118.34206 * 179.97438 * 16 15 13 18 18 Br 1.89101 * 120.37269 * 180.02562 * 17 16 15 19 19 C 1.39260 * 119.25396 * 359.97438 * 17 16 15 20 20 O 1.35520 * 119.52478 * 179.97438 * 19 17 16 21 21 N 1.32391 * 120.95261 * 0.25813 * 19 17 16 22 22 C 1.31672 * 121.81480 * 359.47059 * 21 19 17 23 23 C 1.50695 * 119.68283 * 180.28842 * 22 21 19 24 24 H 4.40639 * 5.51518 * 179.97438 * 4 1 2 25 25 H 1.09008 * 109.47056 * 197.90611 * 3 2 1 26 26 H 1.08999 * 109.47460 * 77.90849 * 3 2 1 27 27 H 0.97001 * 120.00575 * 179.97438 * 8 7 5 28 28 H 1.08000 * 120.82840 * 359.95034 * 16 15 13 29 29 H 0.96705 * 113.99636 * 90.00415 * 20 19 17 30 30 H 1.09000 * 109.47350 * 274.60664 * 23 22 21 31 31 H 1.09006 * 109.46972 * 34.61270 * 23 22 21 32 32 H 1.09000 * 109.46941 * 154.60447 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1739 0.0000 0.0000 3 6 2.6459 0.0007 0.0000 4 7 3.1347 -1.0240 0.9259 5 6 3.2331 -2.3265 0.5157 6 1 3.7931 -3.0374 1.1050 7 6 2.6121 -2.7338 -0.6594 8 7 1.9260 -1.8704 -1.3734 9 14 2.7531 -4.5091 -1.2235 10 1 2.1813 -5.4049 -0.1864 11 1 2.0078 -4.6850 -2.4958 12 1 4.1830 -4.8485 -1.4370 13 6 3.4877 -0.6845 2.1816 14 8 3.9681 -1.5187 2.9248 15 6 3.2913 0.6989 2.6544 16 6 3.9148 1.7713 1.9980 17 6 3.6998 3.0474 2.4777 18 35 4.5109 4.5343 1.6368 19 6 2.8781 3.2278 3.5875 20 8 2.6637 4.4784 4.0635 21 7 2.3078 2.1946 4.1876 22 6 2.4813 0.9612 3.7605 23 6 1.8036 -0.1786 4.4763 24 1 -1.0499 -0.0001 0.0004 25 1 3.0088 0.9788 0.3160 26 1 3.0094 -0.2144 -1.0048 27 1 1.4930 -2.1545 -2.1935 28 1 4.5473 1.6022 1.1391 29 1 1.9010 4.9237 3.6696 30 1 2.4204 -0.4982 5.3162 31 1 0.8313 0.1498 4.8437 32 1 1.6689 -1.0119 3.7867 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000285927811.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:15:13 Heat of formation + Delta-G solvation = 47.457163 kcal Electronic energy + Delta-G solvation = -21209.534998 eV Core-core repulsion = 17798.891215 eV Total energy + Delta-G solvation = -3410.643782 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 338.005 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -40.68202 -38.72123 -36.99760 -35.42324 -33.56545 -32.22519 -31.50729 -31.18136 -30.45553 -27.13818 -26.52846 -25.13170 -23.52317 -22.23731 -19.82416 -18.71218 -18.08117 -17.04728 -16.90179 -16.35204 -15.91519 -15.05641 -14.42980 -14.14556 -13.91688 -13.75480 -13.63860 -13.10867 -12.61114 -12.52365 -12.24949 -12.09035 -11.98586 -11.62741 -11.43272 -11.18018 -11.02643 -10.68207 -10.49765 -10.37589 -9.68741 -9.61991 -9.50111 -9.32841 -8.86701 -8.66829 -8.47089 -8.11687 -6.45533 -4.06699 0.77674 1.08346 1.51169 3.03422 3.14245 3.16432 3.27534 3.47633 3.66514 3.87871 4.00552 4.13089 4.53284 4.67016 4.80403 4.91486 5.08646 5.30936 5.44210 5.56670 5.71888 5.87167 5.94536 6.15285 6.15721 6.24641 6.54691 6.81371 7.02276 7.34667 7.34928 7.75289 7.89065 8.20665 8.81920 8.89526 9.10348 9.62899 10.45585 Molecular weight = 338.01amu Principal moments of inertia in cm(-1) A = 0.017193 B = 0.004413 C = 0.004039 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1628.161204 B = 6342.892140 C = 6930.016108 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.277 4.277 2 C -0.092 4.092 3 C 0.223 3.777 4 N -0.422 5.422 5 C -0.304 4.304 6 H 0.110 0.890 7 C 0.030 3.970 8 N -0.867 5.867 9 Si 0.937 3.063 10 H -0.271 1.271 11 H -0.283 1.283 12 H -0.271 1.271 13 C 0.481 3.519 14 O -0.572 6.572 15 C -0.140 4.140 16 C -0.017 4.017 17 C -0.170 4.170 18 Br -0.031 7.031 19 C 0.340 3.660 20 O -0.471 6.471 21 N -0.493 5.493 22 C 0.201 3.799 23 C -0.102 4.102 24 H 0.197 0.803 25 H 0.058 0.942 26 H 0.127 0.873 27 H 0.273 0.727 28 H 0.153 0.847 29 H 0.401 0.599 30 H 0.087 0.913 31 H 0.076 0.924 32 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.207 12.122 2.092 12.303 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.297 4.297 2 C -0.095 4.095 3 C 0.101 3.899 4 N -0.138 5.138 5 C -0.431 4.431 6 H 0.128 0.872 7 C -0.173 4.173 8 N -0.505 5.505 9 Si 0.763 3.237 10 H -0.197 1.197 11 H -0.208 1.208 12 H -0.196 1.196 13 C 0.269 3.731 14 O -0.457 6.457 15 C -0.146 4.146 16 C -0.044 4.044 17 C -0.252 4.252 18 Br 0.053 6.947 19 C 0.158 3.842 20 O -0.278 6.278 21 N -0.212 5.212 22 C 0.062 3.938 23 C -0.159 4.159 24 H 0.214 0.786 25 H 0.076 0.924 26 H 0.144 0.856 27 H 0.085 0.915 28 H 0.171 0.829 29 H 0.259 0.741 30 H 0.105 0.895 31 H 0.095 0.905 32 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 0.637 12.307 2.970 12.676 hybrid contribution -0.423 -0.972 -1.321 1.694 sum 0.214 11.335 1.649 11.456 Atomic orbital electron populations 1.24185 0.95319 1.05469 1.04687 1.22875 0.94044 0.95889 0.96644 1.18830 0.84911 0.89068 0.97135 1.43742 1.53533 1.08368 1.08201 1.19806 1.31108 0.85264 1.06900 0.87182 1.25425 0.95063 1.00400 0.96447 1.69894 1.31412 1.33812 1.15385 0.85816 0.78676 0.81279 0.77947 1.19668 1.20775 1.19631 1.17388 0.87004 0.86147 0.82555 1.90671 1.49434 1.50660 1.54890 1.21204 0.99562 0.96054 0.97826 1.21686 0.95669 0.89379 0.97698 1.22837 1.07544 0.94450 1.00407 1.96680 1.80296 1.38911 1.78782 1.18807 0.92136 0.85695 0.87588 1.84739 1.52640 1.22915 1.67475 1.67126 1.24222 0.99193 1.30685 1.21204 0.91053 0.90944 0.90584 1.20796 0.99946 0.94233 1.00974 0.78602 0.92448 0.85560 0.91541 0.82924 0.74108 0.89464 0.90518 0.89356 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.28 -5.70 19.24 29.55 0.57 -5.13 16 2 C -0.09 -2.03 11.00 -37.13 -0.41 -2.44 16 3 C 0.22 4.76 5.09 -6.83 -0.03 4.73 16 4 N -0.42 -10.02 2.60 -119.13 -0.31 -10.33 16 5 C -0.30 -7.75 9.46 -15.00 -0.14 -7.89 16 6 H 0.11 2.93 7.22 -52.49 -0.38 2.55 16 7 C 0.03 0.74 5.36 -17.46 -0.09 0.64 16 8 N -0.87 -20.96 7.99 55.50 0.44 -20.51 16 9 Si 0.94 19.45 29.55 -169.99 -5.02 14.43 16 10 H -0.27 -5.73 7.11 56.52 0.40 -5.33 16 11 H -0.28 -5.79 7.11 56.52 0.40 -5.38 16 12 H -0.27 -5.57 7.11 56.52 0.40 -5.17 16 13 C 0.48 11.08 5.83 -12.48 -0.07 11.01 16 14 O -0.57 -14.79 15.97 5.26 0.08 -14.70 16 15 C -0.14 -2.72 4.97 -104.83 -0.52 -3.24 16 16 C -0.02 -0.28 7.44 -38.87 -0.29 -0.57 16 17 C -0.17 -2.58 6.25 -39.29 -0.25 -2.83 16 18 Br -0.03 -0.39 33.18 -68.01 -2.26 -2.65 16 19 C 0.34 5.29 7.74 -16.93 -0.13 5.16 16 20 O -0.47 -6.02 12.89 -18.25 -0.24 -6.25 16 21 N -0.49 -8.52 10.28 -9.16 -0.09 -8.61 16 22 C 0.20 3.69 6.82 -82.16 -0.56 3.13 16 23 C -0.10 -1.73 9.54 36.00 0.34 -1.39 16 24 H 0.20 3.32 7.80 -54.09 -0.42 2.89 16 25 H 0.06 1.07 4.20 -51.92 -0.22 0.85 16 26 H 0.13 2.83 6.35 -51.93 -0.33 2.50 16 27 H 0.27 6.40 8.31 -40.82 -0.34 6.06 16 28 H 0.15 2.36 7.39 -52.49 -0.39 1.97 16 29 H 0.40 3.22 9.06 45.56 0.41 3.63 16 30 H 0.09 1.40 8.14 -51.93 -0.42 0.97 16 31 H 0.08 1.12 8.14 -51.93 -0.42 0.70 16 32 H 0.09 1.69 6.72 -51.93 -0.35 1.34 16 LS Contribution 305.85 15.07 4.61 4.61 Total: -1.00 -29.22 305.85 -6.02 -35.25 By element: Atomic # 1 Polarization: 9.25 SS G_CDS: -1.65 Total: 7.59 kcal Atomic # 6 Polarization: 2.76 SS G_CDS: -1.59 Total: 1.18 kcal Atomic # 7 Polarization: -39.49 SS G_CDS: 0.04 Total: -39.45 kcal Atomic # 8 Polarization: -20.81 SS G_CDS: -0.15 Total: -20.96 kcal Atomic # 14 Polarization: 19.45 SS G_CDS: -5.02 Total: 14.43 kcal Atomic # 35 Polarization: -0.39 SS G_CDS: -2.26 Total: -2.65 kcal Total LS contribution 4.61 Total: 4.61 kcal Total: -29.22 -6.02 -35.25 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000285927811.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 82.702 kcal (2) G-P(sol) polarization free energy of solvation -29.223 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.479 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.022 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.245 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.457 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds