Wall clock time and date at job start Tue Mar 31 2020 20:15:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17402 * 1 3 3 C 1.47204 * 179.97438 * 2 1 4 4 N 1.46501 * 109.46659 * 227.51428 * 3 2 1 5 5 C 1.36909 * 119.99500 * 263.87851 * 4 3 2 6 6 H 1.08001 * 119.99449 * 206.85900 * 5 4 3 7 7 C 1.39017 * 120.00108 * 26.85798 * 5 4 3 8 8 N 1.31384 * 120.00160 * 11.03472 * 7 5 4 9 9 Si 1.86800 * 119.99896 * 191.03348 * 7 5 4 10 10 H 1.48503 * 109.47295 * 359.97438 * 9 7 5 11 11 H 1.48504 * 109.47137 * 119.99900 * 9 7 5 12 12 H 1.48504 * 109.47354 * 239.99844 * 9 7 5 13 13 C 1.34772 * 120.00144 * 83.88152 * 4 3 2 14 14 O 1.21629 * 120.00101 * 4.51259 * 13 4 3 15 15 C 1.47426 * 119.99723 * 184.50989 * 13 4 3 16 16 C 1.40043 * 120.59679 * 37.54165 * 15 13 4 17 17 C 1.38397 * 118.33310 * 180.02562 * 16 15 13 18 18 Br 1.89097 * 120.27939 * 179.97438 * 17 16 15 19 19 C 1.38457 * 119.44420 * 0.02562 * 17 16 15 20 20 C 1.50699 * 119.40569 * 179.97438 * 19 17 16 21 21 N 1.31895 * 121.18148 * 359.72402 * 19 17 16 22 22 C 1.32209 * 121.81836 * 0.56672 * 21 19 17 23 23 O 1.35443 * 119.79255 * 179.71243 * 22 21 19 24 24 H 4.40636 * 5.51434 * 179.97438 * 4 1 2 25 25 H 1.08995 * 109.46987 * 107.51558 * 3 2 1 26 26 H 1.08998 * 109.47156 * 347.51385 * 3 2 1 27 27 H 0.97007 * 119.99789 * 180.02562 * 8 7 5 28 28 H 1.07997 * 120.83525 * 0.04322 * 16 15 13 29 29 H 1.09007 * 109.46929 * 90.00020 * 20 19 17 30 30 H 1.08999 * 109.47038 * 210.00140 * 20 19 17 31 31 H 1.09001 * 109.47238 * 330.00271 * 20 19 17 32 32 H 0.96700 * 114.00177 * 269.72640 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6461 0.0007 0.0000 4 7 3.1339 0.9338 1.0186 5 6 3.4806 2.2108 0.6671 6 1 4.2124 2.7511 1.2493 7 6 2.8908 2.8117 -0.4390 8 7 1.8531 2.2498 -1.0167 9 14 3.5735 4.4183 -1.1040 10 1 4.7354 4.8407 -0.2812 11 1 4.0064 4.2273 -2.5116 12 1 2.5211 5.4646 -1.0474 13 6 3.2413 0.5352 2.3015 14 8 3.0121 -0.6214 2.6003 15 6 3.6368 1.5010 3.3428 16 6 3.1818 2.8247 3.2970 17 6 3.5825 3.6920 4.2983 18 35 3.0015 5.4915 4.2900 19 6 4.4132 3.2312 5.3057 20 6 4.8494 4.1765 6.3953 21 7 4.8255 1.9787 5.3314 22 6 4.4771 1.1108 4.3968 23 8 4.9292 -0.1644 4.4604 24 1 -1.0501 0.0000 -0.0003 25 1 3.0092 0.3101 -0.9800 26 1 3.0098 -1.0025 0.2222 27 1 1.4418 2.6690 -1.7887 28 1 2.5344 3.1603 2.5004 29 1 4.1323 4.1411 7.2156 30 1 5.8333 3.8815 6.7598 31 1 4.8979 5.1906 5.9987 32 1 5.7672 -0.3080 3.9998 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000490960560.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:15:16 Heat of formation + Delta-G solvation = 36.937738 kcal Electronic energy + Delta-G solvation = -21232.031341 eV Core-core repulsion = 17820.931403 eV Total energy + Delta-G solvation = -3411.099939 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 338.005 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -40.48050 -38.43307 -36.99650 -35.16262 -33.04461 -32.39836 -31.98409 -31.28655 -29.62775 -27.66414 -26.40789 -24.85937 -22.81940 -22.44706 -19.74087 -18.46774 -18.08707 -17.03244 -16.64480 -16.23333 -15.43199 -14.72081 -14.55153 -14.32389 -13.96638 -13.86121 -13.26902 -13.03485 -12.51485 -12.43078 -12.21261 -12.03817 -11.94287 -11.65442 -11.36223 -11.23109 -10.99543 -10.84508 -10.55947 -10.08931 -9.55078 -9.48023 -9.36353 -9.24106 -8.78991 -8.61135 -8.34819 -8.02637 -6.53897 -4.23151 0.90077 1.34616 1.71673 2.97482 3.09762 3.12388 3.37493 3.69967 3.75807 3.98427 4.13242 4.23692 4.64743 4.72199 4.85189 4.99897 5.25562 5.48950 5.59841 5.63184 5.68354 5.81999 6.06524 6.14802 6.32225 6.55839 6.64355 6.73011 7.10669 7.14856 7.48491 7.76966 8.02013 8.10344 8.81121 8.94377 9.18710 9.61082 10.41648 Molecular weight = 338.01amu Principal moments of inertia in cm(-1) A = 0.011357 B = 0.006483 C = 0.004730 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2464.945206 B = 4317.975247 C = 5917.763617 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.269 4.269 2 C -0.099 4.099 3 C 0.244 3.756 4 N -0.426 5.426 5 C -0.351 4.351 6 H 0.098 0.902 7 C 0.045 3.955 8 N -0.843 5.843 9 Si 0.913 3.087 10 H -0.264 1.264 11 H -0.277 1.277 12 H -0.276 1.276 13 C 0.503 3.497 14 O -0.576 6.576 15 C -0.154 4.154 16 C 0.021 3.979 17 C -0.173 4.173 18 Br -0.039 7.039 19 C 0.182 3.818 20 C -0.112 4.112 21 N -0.505 5.505 22 C 0.358 3.642 23 O -0.460 6.460 24 H 0.197 0.803 25 H 0.103 0.897 26 H 0.069 0.931 27 H 0.274 0.726 28 H 0.172 0.828 29 H 0.084 0.916 30 H 0.081 0.919 31 H 0.084 0.916 32 H 0.398 0.602 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.277 7.286 6.707 10.787 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.288 4.288 2 C -0.101 4.101 3 C 0.122 3.878 4 N -0.143 5.143 5 C -0.479 4.479 6 H 0.116 0.884 7 C -0.164 4.164 8 N -0.478 5.478 9 Si 0.739 3.261 10 H -0.188 1.188 11 H -0.202 1.202 12 H -0.202 1.202 13 C 0.291 3.709 14 O -0.461 6.461 15 C -0.161 4.161 16 C -0.006 4.006 17 C -0.255 4.255 18 Br 0.045 6.955 19 C 0.040 3.960 20 C -0.169 4.169 21 N -0.226 5.226 22 C 0.178 3.822 23 O -0.266 6.266 24 H 0.214 0.786 25 H 0.121 0.879 26 H 0.087 0.913 27 H 0.085 0.915 28 H 0.189 0.811 29 H 0.102 0.898 30 H 0.099 0.901 31 H 0.102 0.898 32 H 0.256 0.744 Dipole moment (debyes) X Y Z Total from point charges 3.877 6.950 7.583 10.993 hybrid contribution -0.047 0.876 -1.500 1.738 sum 3.830 7.825 6.083 10.626 Atomic orbital electron populations 1.24167 0.95296 1.05751 1.03555 1.22950 0.94178 0.95537 0.97399 1.18021 0.84432 0.91997 0.93314 1.43507 1.54911 1.11616 1.04302 1.19659 1.23303 0.90398 1.14501 0.88416 1.25400 0.94478 0.99226 0.97253 1.69994 1.17770 1.39066 1.20940 0.86050 0.79409 0.81380 0.79274 1.18838 1.20230 1.20168 1.17608 0.83831 0.87289 0.82186 1.90714 1.55747 1.18435 1.81212 1.21166 1.02462 0.94911 0.97601 1.22213 0.93452 0.90376 0.94602 1.22609 1.07633 0.93458 1.01785 1.96616 1.88935 1.11134 1.98822 1.20904 0.91201 0.90168 0.93687 1.20912 1.02820 0.97230 0.95926 1.67111 1.26343 1.02097 1.27037 1.19209 0.91173 0.84184 0.87645 1.84766 1.43280 1.20587 1.77953 0.78583 0.87928 0.91258 0.91506 0.81056 0.89760 0.90051 0.89759 0.74380 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.27 -5.94 19.25 29.55 0.57 -5.37 16 2 C -0.10 -2.36 11.19 -37.12 -0.42 -2.77 16 3 C 0.24 5.64 5.10 -6.83 -0.03 5.60 16 4 N -0.43 -10.09 2.58 -119.16 -0.31 -10.40 16 5 C -0.35 -8.10 6.91 -15.00 -0.10 -8.20 16 6 H 0.10 2.19 6.11 -52.49 -0.32 1.87 16 7 C 0.04 1.03 5.06 -17.45 -0.09 0.94 16 8 N -0.84 -20.28 9.24 55.50 0.51 -19.77 16 9 Si 0.91 18.08 29.57 -169.99 -5.03 13.06 16 10 H -0.26 -5.15 7.11 56.52 0.40 -4.75 16 11 H -0.28 -5.51 7.11 56.52 0.40 -5.10 16 12 H -0.28 -5.54 7.11 56.52 0.40 -5.14 16 13 C 0.50 11.98 7.10 -12.52 -0.09 11.89 16 14 O -0.58 -15.10 15.72 -11.38 -0.18 -15.28 16 15 C -0.15 -3.24 5.25 -104.69 -0.55 -3.79 16 16 C 0.02 0.40 7.58 -38.85 -0.29 0.11 16 17 C -0.17 -2.90 6.23 -39.44 -0.25 -3.14 16 18 Br -0.04 -0.56 31.77 -68.01 -2.16 -2.72 16 19 C 0.18 2.90 6.78 -82.48 -0.56 2.34 16 20 C -0.11 -1.30 9.70 36.01 0.35 -0.95 16 21 N -0.51 -9.03 10.28 -9.17 -0.09 -9.13 16 22 C 0.36 6.95 7.74 -16.60 -0.13 6.82 16 23 O -0.46 -8.48 12.28 -34.66 -0.43 -8.90 16 24 H 0.20 3.57 7.80 -54.08 -0.42 3.15 16 25 H 0.10 2.35 6.80 -51.93 -0.35 2.00 16 26 H 0.07 1.53 7.55 -51.93 -0.39 1.14 16 27 H 0.27 6.33 8.31 -40.82 -0.34 5.99 16 28 H 0.17 3.56 6.41 -52.49 -0.34 3.22 16 29 H 0.08 0.88 8.14 -51.93 -0.42 0.46 16 30 H 0.08 0.87 8.14 -51.93 -0.42 0.45 16 31 H 0.08 0.88 6.60 -51.93 -0.34 0.54 16 32 H 0.40 5.31 9.06 45.56 0.41 5.73 16 LS Contribution 305.58 15.07 4.60 4.60 Total: -1.00 -29.11 305.58 -6.40 -35.51 By element: Atomic # 1 Polarization: 11.29 SS G_CDS: -1.73 Total: 9.56 kcal Atomic # 6 Polarization: 5.05 SS G_CDS: -1.59 Total: 3.46 kcal Atomic # 7 Polarization: -39.41 SS G_CDS: 0.11 Total: -39.29 kcal Atomic # 8 Polarization: -23.57 SS G_CDS: -0.60 Total: -24.18 kcal Atomic # 14 Polarization: 18.08 SS G_CDS: -5.03 Total: 13.06 kcal Atomic # 35 Polarization: -0.56 SS G_CDS: -2.16 Total: -2.72 kcal Total LS contribution 4.60 Total: 4.60 kcal Total: -29.11 -6.40 -35.51 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000490960560.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 72.448 kcal (2) G-P(sol) polarization free energy of solvation -29.111 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 43.337 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.400 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.511 kcal (6) G-S(sol) free energy of system = (1) + (5) 36.938 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds