Wall clock time and date at job start Tue Mar 31 2020 20:26:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17406 * 1 3 3 C 1.47194 * 179.97438 * 2 1 4 4 N 1.46500 * 109.47063 * 239.96701 * 3 2 1 5 5 C 1.36905 * 119.99943 * 89.25896 * 4 3 2 6 6 H 1.08005 * 119.99826 * 163.64871 * 5 4 3 7 7 C 1.39020 * 120.00284 * 343.65043 * 5 4 3 8 8 N 1.31382 * 119.99843 * 330.00909 * 7 5 4 9 9 Si 1.86796 * 120.00205 * 150.00682 * 7 5 4 10 10 H 1.48497 * 109.47114 * 60.00326 * 9 7 5 11 11 H 1.48500 * 109.47007 * 179.97438 * 9 7 5 12 12 H 1.48494 * 109.47245 * 300.00020 * 9 7 5 13 13 C 1.34780 * 120.00176 * 269.26301 * 4 3 2 14 14 O 1.21618 * 120.00041 * 184.14771 * 13 4 3 15 15 C 1.47512 * 120.00026 * 4.14998 * 13 4 3 16 16 C 1.39622 * 120.49858 * 299.92962 * 15 13 4 17 17 N 1.31643 * 120.63006 * 179.97438 * 16 15 13 18 18 C 1.32415 * 121.81890 * 359.97438 * 17 16 15 19 19 O 1.35526 * 119.52129 * 180.02562 * 18 17 16 20 20 C 1.42894 * 116.99910 * 0.02562 * 19 18 17 21 21 C 1.39220 * 120.95283 * 0.02562 * 18 17 16 22 22 Br 1.89097 * 120.36984 * 180.02562 * 21 18 17 23 23 C 1.38043 * 119.25393 * 359.74107 * 21 18 17 24 24 H 4.40644 * 5.51331 * 179.97438 * 4 1 2 25 25 H 1.08995 * 109.47481 * 359.96750 * 3 2 1 26 26 H 1.08996 * 109.46907 * 119.97015 * 3 2 1 27 27 H 0.96999 * 120.00247 * 179.97438 * 8 7 5 28 28 H 1.07997 * 119.68498 * 359.97438 * 16 15 13 29 29 H 1.08997 * 109.47518 * 300.00035 * 20 19 18 30 30 H 1.09005 * 109.47292 * 60.00526 * 20 19 18 31 31 H 1.09005 * 109.47051 * 179.97438 * 20 19 18 32 32 H 1.08002 * 120.83182 * 180.27785 * 23 21 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1741 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1340 0.6922 1.1958 5 6 3.3480 -0.0085 2.3523 6 1 3.9449 0.4227 3.1423 7 6 2.7971 -1.2752 2.5097 8 7 1.6660 -1.5782 1.9140 9 14 3.6650 -2.5463 3.5681 10 1 3.7882 -2.0336 4.9564 11 1 2.8784 -3.8058 3.5741 12 1 5.0180 -2.8097 3.0158 13 6 3.3722 2.0182 1.1574 14 8 3.8484 2.5788 2.1259 15 6 3.0553 2.7896 -0.0594 16 6 3.6652 2.4766 -1.2757 17 7 3.3840 3.1629 -2.3633 18 6 2.5209 4.1671 -2.3514 19 8 2.2657 4.8419 -3.4987 20 6 2.9610 4.4139 -4.6714 21 6 1.8719 4.5396 -1.1774 22 35 0.6419 5.9759 -1.1794 23 6 2.1321 3.8450 -0.0132 24 1 -1.0501 0.0000 -0.0003 25 1 3.0098 -1.0268 0.0006 26 1 3.0091 0.5142 -0.8902 27 1 1.2817 -2.4620 2.0235 28 1 4.3745 1.6636 -1.3248 29 1 4.0351 4.5053 -4.5107 30 1 2.7123 3.3737 -4.8820 31 1 2.6654 5.0359 -5.5164 32 1 1.6396 4.1095 0.9109 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000491626208.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:26:01 Heat of formation + Delta-G solvation = 50.149763 kcal Electronic energy + Delta-G solvation = -20883.195850 eV Core-core repulsion = 17472.668828 eV Total energy + Delta-G solvation = -3410.527023 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 338.005 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -40.70219 -38.90368 -37.43800 -35.31014 -33.14942 -32.31983 -31.44324 -31.06326 -29.42370 -27.50539 -26.48719 -25.22816 -23.30249 -23.13289 -19.73829 -18.47170 -18.05551 -17.32639 -16.84764 -16.32300 -16.07209 -15.04425 -14.60206 -14.47576 -14.39150 -13.81101 -13.65402 -13.47996 -13.08445 -12.59635 -12.32891 -12.18934 -11.92435 -11.81177 -11.27469 -11.19872 -11.03414 -10.63769 -10.43510 -10.28064 -9.81297 -9.52977 -9.38071 -9.27160 -9.02258 -8.65596 -8.24943 -8.04260 -6.49015 -3.95959 0.92030 1.21782 1.62519 2.97251 3.06764 3.18741 3.21519 3.43908 3.62434 3.94340 4.01541 4.09999 4.30359 4.61577 4.85470 4.97153 5.00135 5.22209 5.25472 5.33301 5.42512 5.47149 5.56455 5.79973 6.09585 6.18218 6.32225 6.45678 6.94864 7.08905 7.41804 7.71221 7.86762 8.24350 8.83018 8.94551 9.16104 9.71018 10.45814 Molecular weight = 338.01amu Principal moments of inertia in cm(-1) A = 0.019762 B = 0.003861 C = 0.003717 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1416.509087 B = 7250.004213 C = 7531.822376 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.245 4.245 2 C -0.119 4.119 3 C 0.225 3.775 4 N -0.418 5.418 5 C -0.327 4.327 6 H 0.111 0.889 7 C 0.040 3.960 8 N -0.833 5.833 9 Si 0.916 3.084 10 H -0.271 1.271 11 H -0.284 1.284 12 H -0.271 1.271 13 C 0.482 3.518 14 O -0.573 6.573 15 C -0.164 4.164 16 C 0.166 3.834 17 N -0.528 5.528 18 C 0.341 3.659 19 O -0.296 6.296 20 C 0.039 3.961 21 C -0.163 4.163 22 Br -0.030 7.030 23 C 0.021 3.979 24 H 0.198 0.802 25 H 0.099 0.901 26 H 0.070 0.930 27 H 0.272 0.728 28 H 0.172 0.828 29 H 0.060 0.940 30 H 0.061 0.939 31 H 0.096 0.904 32 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.488 8.607 -11.965 14.815 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.265 4.265 2 C -0.121 4.121 3 C 0.102 3.898 4 N -0.134 5.134 5 C -0.453 4.453 6 H 0.128 0.872 7 C -0.168 4.168 8 N -0.467 5.467 9 Si 0.742 3.258 10 H -0.196 1.196 11 H -0.210 1.210 12 H -0.196 1.196 13 C 0.270 3.730 14 O -0.458 6.458 15 C -0.170 4.170 16 C 0.009 3.991 17 N -0.252 5.252 18 C 0.160 3.840 19 O -0.202 6.202 20 C -0.056 4.056 21 C -0.245 4.245 22 Br 0.055 6.945 23 C -0.006 4.006 24 H 0.215 0.785 25 H 0.117 0.883 26 H 0.088 0.912 27 H 0.083 0.917 28 H 0.189 0.811 29 H 0.079 0.921 30 H 0.079 0.921 31 H 0.114 0.886 32 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges -1.598 9.227 -12.346 15.495 hybrid contribution -0.081 -1.141 1.125 1.605 sum -1.678 8.086 -11.221 13.932 Atomic orbital electron populations 1.24188 0.95268 1.03680 1.03316 1.22797 0.94068 0.97704 0.97483 1.18400 0.85143 0.98943 0.87294 1.43724 1.54359 1.04975 1.10383 1.19620 1.31468 0.97659 0.96560 0.87186 1.25347 0.94340 0.99040 0.98083 1.70217 1.12920 1.21568 1.42022 0.86156 0.79755 0.79409 0.80496 1.19587 1.20983 1.19617 1.17455 0.86887 0.81862 0.86748 1.90662 1.49183 1.68952 1.36988 1.21168 1.00105 0.99043 0.96725 1.22797 0.95194 0.95279 0.85803 1.67405 1.17572 1.08394 1.31834 1.19417 0.89963 0.88666 0.85920 1.86271 1.63974 1.54413 1.15561 1.22895 0.97214 1.01133 0.84361 1.21504 1.05737 1.02675 0.94617 1.96654 1.56793 1.41948 1.99142 1.21377 0.92335 0.90362 0.96554 0.78492 0.88340 0.91221 0.91733 0.81126 0.92136 0.92066 0.88593 0.82993 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.25 -5.08 19.06 29.55 0.56 -4.52 16 2 C -0.12 -2.61 11.04 -37.12 -0.41 -3.02 16 3 C 0.23 4.71 4.97 -6.83 -0.03 4.68 16 4 N -0.42 -9.99 2.58 -119.13 -0.31 -10.29 16 5 C -0.33 -8.49 9.28 -15.00 -0.14 -8.63 16 6 H 0.11 3.03 7.41 -52.48 -0.39 2.64 16 7 C 0.04 0.98 4.66 -17.45 -0.08 0.90 16 8 N -0.83 -20.76 9.52 55.50 0.53 -20.23 16 9 Si 0.92 19.23 29.65 -169.99 -5.04 14.19 16 10 H -0.27 -5.79 7.11 56.52 0.40 -5.38 16 11 H -0.28 -5.90 7.11 56.52 0.40 -5.50 16 12 H -0.27 -5.60 7.11 56.52 0.40 -5.20 16 13 C 0.48 11.31 7.10 -12.48 -0.09 11.22 16 14 O -0.57 -15.44 16.74 5.26 0.09 -15.36 16 15 C -0.16 -3.14 4.97 -104.82 -0.52 -3.66 16 16 C 0.17 2.75 8.83 -17.12 -0.15 2.60 16 17 N -0.53 -8.32 9.18 -12.92 -0.12 -8.44 16 18 C 0.34 5.38 7.49 -16.94 -0.13 5.25 16 19 O -0.30 -4.09 9.80 -18.27 -0.18 -4.27 16 20 C 0.04 0.40 10.37 101.05 1.05 1.44 16 21 C -0.16 -2.65 6.25 -39.29 -0.25 -2.89 16 22 Br -0.03 -0.41 33.18 -68.01 -2.26 -2.67 16 23 C 0.02 0.38 9.69 -38.88 -0.38 0.01 16 24 H 0.20 3.39 7.80 -54.08 -0.42 2.97 16 25 H 0.10 2.09 7.05 -51.93 -0.37 1.73 16 26 H 0.07 1.23 4.39 -51.93 -0.23 1.01 16 27 H 0.27 6.49 8.31 -40.82 -0.34 6.15 16 28 H 0.17 2.45 7.27 -52.49 -0.38 2.06 16 29 H 0.06 0.60 8.10 -51.93 -0.42 0.18 16 30 H 0.06 0.62 8.10 -51.93 -0.42 0.20 16 31 H 0.10 0.69 8.14 -51.93 -0.42 0.27 16 32 H 0.15 2.68 8.06 -52.49 -0.42 2.26 16 LS Contribution 310.30 15.07 4.68 4.68 Total: -1.00 -29.86 310.30 -5.78 -35.64 By element: Atomic # 1 Polarization: 5.99 SS G_CDS: -2.61 Total: 3.38 kcal Atomic # 6 Polarization: 3.94 SS G_CDS: -0.56 Total: 3.38 kcal Atomic # 7 Polarization: -39.07 SS G_CDS: 0.10 Total: -38.97 kcal Atomic # 8 Polarization: -19.54 SS G_CDS: -0.09 Total: -19.63 kcal Atomic # 14 Polarization: 19.23 SS G_CDS: -5.04 Total: 14.19 kcal Atomic # 35 Polarization: -0.41 SS G_CDS: -2.26 Total: -2.67 kcal Total LS contribution 4.68 Total: 4.68 kcal Total: -29.86 -5.78 -35.64 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000491626208.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.792 kcal (2) G-P(sol) polarization free energy of solvation -29.864 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 55.928 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.778 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.642 kcal (6) G-S(sol) free energy of system = (1) + (5) 50.150 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds