Wall clock time and date at job start Tue Mar 31 2020 20:17:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17407 * 1 3 3 C 1.47203 * 179.97438 * 2 1 4 4 N 1.46493 * 109.47171 * 41.17503 * 3 2 1 5 5 C 1.36944 * 120.00088 * 276.44697 * 4 3 2 6 6 H 1.07994 * 120.00036 * 179.97438 * 5 4 3 7 7 C 1.38815 * 119.99572 * 359.95075 * 5 4 3 8 8 N 1.31611 * 120.00086 * 27.77003 * 7 5 4 9 9 Si 1.86801 * 119.99866 * 207.77201 * 7 5 4 10 10 H 1.48504 * 109.47052 * 359.97438 * 9 7 5 11 11 H 1.48499 * 109.47192 * 119.99847 * 9 7 5 12 12 H 1.48499 * 109.47266 * 240.00514 * 9 7 5 13 13 C 1.46496 * 120.00196 * 96.45166 * 4 3 2 14 14 C 1.50700 * 109.47189 * 269.99745 * 13 4 3 15 15 C 1.38238 * 120.00277 * 259.99984 * 14 13 4 16 16 C 1.38219 * 120.00625 * 180.02562 * 15 14 13 17 17 C 1.38255 * 120.02218 * 359.95090 * 16 15 14 18 18 C 1.38196 * 120.01024 * 0.02781 * 17 16 15 19 19 N 1.48010 * 120.00329 * 179.97438 * 18 17 16 20 20 O 1.21792 * 120.00322 * 359.97438 * 19 18 17 21 21 O 1.21806 * 119.99423 * 179.72016 * 19 18 17 22 22 C 1.38306 * 120.00570 * 80.25477 * 14 13 4 23 23 Br 1.89103 * 120.00914 * 359.97075 * 22 14 13 24 24 H 4.40634 * 5.51419 * 180.02562 * 4 1 2 25 25 H 1.08999 * 109.46959 * 281.16866 * 3 2 1 26 26 H 1.08999 * 109.46778 * 161.17899 * 3 2 1 27 27 H 0.97002 * 120.00003 * 179.97438 * 8 7 5 28 28 H 1.09007 * 109.47447 * 149.99590 * 13 4 3 29 29 H 1.09001 * 109.46918 * 30.00233 * 13 4 3 30 30 H 1.08002 * 119.99967 * 0.02562 * 15 14 13 31 31 H 1.08007 * 119.99052 * 179.97438 * 16 15 14 32 32 H 1.07999 * 119.99601 * 180.02562 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1741 0.0000 0.0000 3 6 2.6461 0.0007 0.0000 4 7 3.1349 -1.0387 -0.9093 5 6 3.2382 -2.3339 -0.4765 6 1 3.5981 -3.1001 -1.1470 7 6 2.8806 -2.6615 0.8242 8 7 1.9758 -1.9462 1.4580 9 14 3.6839 -4.1177 1.6749 10 1 4.6603 -4.7524 0.7534 11 1 4.3869 -3.6510 2.8969 12 1 2.6427 -5.1078 2.0504 13 6 3.5133 -0.6927 -2.2816 14 6 2.3121 -0.8238 -3.1822 15 6 2.1552 -1.9521 -3.9652 16 6 1.0538 -2.0722 -4.7916 17 6 0.1082 -1.0645 -4.8348 18 6 0.2641 0.0636 -4.0520 19 7 -0.7481 1.1426 -4.0987 20 8 -1.7181 1.0364 -4.8274 21 8 -0.6131 2.1346 -3.4049 22 6 1.3694 0.1871 -3.2293 23 35 1.5869 1.7337 -2.1631 24 1 -1.0497 -0.0002 -0.0004 25 1 3.0095 -0.1982 1.0082 26 1 3.0089 0.9735 -0.3315 27 1 1.7257 -2.1755 2.3667 28 1 4.2988 -1.3670 -2.6230 29 1 3.8784 0.3340 -2.3098 30 1 2.8932 -2.7399 -3.9313 31 1 0.9316 -2.9537 -5.4036 32 1 -0.7525 -1.1590 -5.4803 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000491805213.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:17:24 Heat of formation + Delta-G solvation = 142.267115 kcal Electronic energy + Delta-G solvation = -21521.313602 eV Core-core repulsion = 18114.781088 eV Total energy + Delta-G solvation = -3406.532514 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 338.005 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -41.85035 -39.36881 -36.37196 -36.21960 -32.81661 -32.48452 -31.49667 -30.68105 -29.35297 -26.41765 -26.15484 -25.96409 -22.61504 -22.18601 -20.87705 -18.56681 -18.30719 -17.66332 -17.23631 -16.42238 -16.19650 -15.53969 -15.25003 -14.41383 -13.99944 -13.68268 -13.57804 -12.93081 -12.61019 -12.25278 -12.03245 -11.80121 -11.54089 -11.38904 -11.19013 -11.00204 -10.85829 -10.79926 -10.51241 -10.34136 -10.10754 -9.28916 -9.16004 -8.90353 -8.72309 -8.44603 -8.16195 -7.39036 -6.01783 -3.31087 0.09588 1.04515 1.54706 1.65718 1.88261 3.24146 3.32376 3.35132 3.43954 4.14925 4.39242 4.50217 4.53935 4.74868 5.02094 5.05532 5.14921 5.17948 5.50381 5.64364 5.71346 5.83598 5.92944 6.10557 6.26298 6.44403 6.47508 6.59240 6.73906 7.23918 7.40192 7.55801 7.97441 7.99531 8.85861 9.27449 9.51499 9.92919 10.97868 Molecular weight = 338.01amu Principal moments of inertia in cm(-1) A = 0.017817 B = 0.006037 C = 0.005336 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1571.189080 B = 4636.616226 C = 5246.089081 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.303 4.303 2 C -0.080 4.080 3 C 0.258 3.742 4 N -0.569 5.569 5 C -0.271 4.271 6 H 0.083 0.917 7 C 0.010 3.990 8 N -0.871 5.871 9 Si 0.900 3.100 10 H -0.276 1.276 11 H -0.286 1.286 12 H -0.292 1.292 13 C 0.172 3.828 14 C -0.066 4.066 15 C -0.059 4.059 16 C -0.109 4.109 17 C -0.076 4.076 18 C -0.026 4.026 19 N 0.031 4.969 20 O -0.189 6.189 21 O -0.134 6.134 22 C -0.027 4.027 23 Br 0.018 6.982 24 H 0.183 0.817 25 H 0.098 0.902 26 H 0.047 0.953 27 H 0.258 0.742 28 H 0.075 0.925 29 H 0.067 0.933 30 H 0.143 0.857 31 H 0.143 0.857 32 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.880 3.685 -10.433 11.223 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.322 4.322 2 C -0.083 4.083 3 C 0.133 3.867 4 N -0.285 5.285 5 C -0.399 4.399 6 H 0.101 0.899 7 C -0.191 4.191 8 N -0.512 5.512 9 Si 0.729 3.271 10 H -0.201 1.201 11 H -0.212 1.212 12 H -0.219 1.219 13 C 0.044 3.956 14 C -0.074 4.074 15 C -0.080 4.080 16 C -0.128 4.128 17 C -0.097 4.097 18 C -0.112 4.112 19 N 0.547 4.453 20 O -0.396 6.396 21 O -0.355 6.355 22 C -0.109 4.109 23 Br 0.106 6.894 24 H 0.200 0.800 25 H 0.115 0.885 26 H 0.065 0.935 27 H 0.069 0.931 28 H 0.093 0.907 29 H 0.085 0.915 30 H 0.161 0.839 31 H 0.161 0.839 32 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 2.428 3.720 -9.775 10.736 hybrid contribution -0.822 -1.190 0.315 1.480 sum 1.606 2.529 -9.459 9.923 Atomic orbital electron populations 1.23977 0.95179 1.06725 1.06368 1.23720 0.94874 0.94635 0.95110 1.18453 0.83274 0.88924 0.96018 1.44753 1.72755 1.06405 1.04596 1.19317 1.39153 0.85743 0.95690 0.89923 1.24868 0.97437 0.98747 0.98043 1.70252 1.27043 1.40968 1.12894 0.86275 0.79350 0.81659 0.79829 1.20142 1.21184 1.21897 1.20262 0.91040 1.00706 0.83581 1.21410 1.00273 0.91424 0.94263 1.21442 0.97274 0.96719 0.92545 1.21202 0.93598 0.98295 0.99698 1.20813 1.00410 0.90944 0.97515 1.20762 0.92286 0.91623 1.06532 1.43561 1.01083 1.01709 0.98920 1.94471 1.21327 1.85794 1.38029 1.94677 1.81966 1.20190 1.38683 1.21607 0.95220 0.97146 0.96969 1.96787 1.96399 1.30626 1.65564 0.79982 0.88476 0.93546 0.93127 0.90673 0.91485 0.83914 0.83928 0.83341 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 24. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.30 -7.13 18.66 29.55 0.55 -6.58 16 2 C -0.08 -1.89 8.09 -37.12 -0.30 -2.20 16 3 C 0.26 5.76 4.81 -6.83 -0.03 5.72 16 4 N -0.57 -12.42 2.49 -177.95 -0.44 -12.86 16 5 C -0.27 -6.53 9.65 -15.05 -0.15 -6.68 16 6 H 0.08 1.91 7.97 -52.49 -0.42 1.49 16 7 C 0.01 0.24 4.97 -17.43 -0.09 0.16 16 8 N -0.87 -23.21 8.92 55.49 0.49 -22.71 16 9 Si 0.90 20.00 29.63 -169.99 -5.04 14.96 16 10 H -0.28 -5.96 7.11 56.52 0.40 -5.56 16 11 H -0.29 -6.43 7.11 56.52 0.40 -6.03 16 12 H -0.29 -6.72 7.11 56.52 0.40 -6.32 16 13 C 0.17 3.00 5.38 -5.20 -0.03 2.97 16 14 C -0.07 -1.12 5.47 -104.60 -0.57 -1.69 16 15 C -0.06 -0.85 9.67 -39.59 -0.38 -1.23 16 16 C -0.11 -1.37 10.05 -39.58 -0.40 -1.77 16 17 C -0.08 -1.09 9.55 -39.59 -0.38 -1.47 16 18 C -0.03 -0.46 6.85 -79.93 -0.55 -1.01 16 19 N 0.03 0.57 4.45 33.97 0.15 0.72 16 20 O -0.19 -3.43 18.45 -29.46 -0.54 -3.98 16 21 O -0.13 -2.58 15.52 -29.46 -0.46 -3.04 16 22 C -0.03 -0.48 5.85 -39.52 -0.23 -0.71 16 23 Br 0.02 0.33 22.09 -68.01 -1.50 -1.17 16 24 H 0.18 3.92 7.80 -54.10 -0.42 3.50 16 25 H 0.10 2.40 6.25 -51.93 -0.32 2.08 16 26 H 0.05 0.92 5.93 -51.93 -0.31 0.61 16 27 H 0.26 6.79 8.31 -40.82 -0.34 6.45 16 28 H 0.08 1.17 7.90 -51.93 -0.41 0.76 16 29 H 0.07 1.08 6.84 -51.93 -0.36 0.72 16 30 H 0.14 1.73 8.04 -52.49 -0.42 1.31 16 31 H 0.14 1.27 8.06 -52.48 -0.42 0.85 16 32 H 0.15 1.83 7.61 -52.49 -0.40 1.43 16 LS Contribution 296.60 15.07 4.47 4.47 Total: -1.00 -28.77 296.60 -8.04 -36.81 By element: Atomic # 1 Polarization: 3.91 SS G_CDS: -2.62 Total: 1.29 kcal Atomic # 6 Polarization: -11.93 SS G_CDS: -2.55 Total: -14.48 kcal Atomic # 7 Polarization: -35.06 SS G_CDS: 0.20 Total: -34.86 kcal Atomic # 8 Polarization: -6.01 SS G_CDS: -1.00 Total: -7.02 kcal Atomic # 14 Polarization: 20.00 SS G_CDS: -5.04 Total: 14.96 kcal Atomic # 35 Polarization: 0.33 SS G_CDS: -1.50 Total: -1.17 kcal Total LS contribution 4.47 Total: 4.47 kcal Total: -28.77 -8.04 -36.81 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000491805213.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 179.074 kcal (2) G-P(sol) polarization free energy of solvation -28.771 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 150.304 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.037 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.807 kcal (6) G-S(sol) free energy of system = (1) + (5) 142.267 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds