Wall clock time and date at job start Tue Mar 31 2020 21:26:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35738 * 117.00009 * 2 1 4 4 C 1.39147 * 120.38582 * 0.03129 * 3 2 1 5 5 C 1.38378 * 118.46582 * 179.70442 * 4 3 2 6 6 C 1.39419 * 119.15813 * 0.50718 * 5 4 3 7 7 C 1.47916 * 119.65563 * 179.75301 * 6 5 4 8 8 O 1.21546 * 119.99461 * 359.72965 * 7 6 5 9 9 N 1.34777 * 120.00231 * 179.73180 * 7 6 5 10 10 C 1.46496 * 120.00037 * 180.02562 * 9 7 6 11 11 H 1.09001 * 109.47054 * 324.99327 * 10 9 7 12 12 C 1.50697 * 109.47016 * 205.00057 * 10 9 7 13 13 H 1.07998 * 120.00039 * 359.97438 * 12 10 9 14 14 C 1.37881 * 120.00021 * 180.02562 * 12 10 9 15 15 N 1.31519 * 119.99891 * 359.97438 * 14 12 10 16 16 Si 1.86800 * 120.00032 * 180.02562 * 14 12 10 17 17 H 1.48501 * 109.47104 * 359.97438 * 16 14 12 18 18 H 1.48494 * 109.47457 * 119.99350 * 16 14 12 19 19 H 1.48496 * 109.46986 * 239.99711 * 16 14 12 20 20 C 1.52997 * 109.47294 * 84.99596 * 10 9 7 21 21 F 1.39905 * 109.47157 * 179.97438 * 20 10 9 22 22 F 1.39900 * 109.47010 * 60.00333 * 20 10 9 23 23 F 1.39897 * 109.47422 * 300.00024 * 20 10 9 24 24 N 1.32848 * 120.69324 * 359.48009 * 6 5 4 25 25 C 1.31459 * 121.67805 * 0.27242 * 24 6 5 26 26 Cl 1.73602 * 119.61334 * 179.97438 * 25 24 6 27 27 H 1.08999 * 109.46670 * 299.98967 * 1 2 3 28 28 H 1.09000 * 109.47351 * 59.99420 * 1 2 3 29 29 H 1.08997 * 109.46752 * 179.97438 * 1 2 3 30 30 H 1.08001 * 120.77041 * 359.97438 * 4 3 2 31 31 H 1.07998 * 120.42598 * 180.28087 * 5 4 3 32 32 H 0.97005 * 119.99645 * 359.97438 * 9 7 6 33 33 H 0.97001 * 120.00022 * 180.02562 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0453 1.2094 0.0000 4 6 1.2953 2.3815 0.0007 5 6 1.9645 3.5927 0.0069 6 6 3.3586 3.5985 0.0015 7 6 4.0851 4.8870 0.0026 8 8 3.4666 5.9333 0.0031 9 7 5.4328 4.9008 0.0029 10 6 6.1523 6.1769 0.0045 11 1 5.5976 6.9075 -0.5844 12 6 7.5208 5.9827 -0.5959 13 1 7.8244 5.0063 -0.9435 14 6 8.3857 7.0514 -0.7005 15 7 8.0161 8.2404 -0.2768 16 14 10.0818 6.8109 -1.4455 17 1 10.2513 5.3899 -1.8420 18 1 10.2249 7.6793 -2.6415 19 1 11.1176 7.1720 -0.4446 20 6 6.2929 6.6813 1.4420 21 9 6.9805 7.8997 1.4436 22 9 7.0049 5.7437 2.1977 23 9 5.0225 6.8616 1.9994 24 7 4.0415 2.4590 0.0009 25 6 3.4368 1.2918 0.0000 26 17 4.3822 -0.1642 -0.0015 27 1 -0.3632 0.5137 0.8901 28 1 -0.3634 0.5139 -0.8899 29 1 -0.3633 -1.0277 -0.0005 30 1 0.2158 2.3467 0.0008 31 1 1.4138 4.5217 0.0122 32 1 5.9264 4.0657 0.0028 33 1 8.6245 8.9923 -0.3507 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000928807461.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 21:26:59 Heat of formation + Delta-G solvation = -173.040803 kcal Electronic energy + Delta-G solvation = -27273.390469 eV Core-core repulsion = 22525.756123 eV Total energy + Delta-G solvation = -4747.634346 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 338.043 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -48.34550 -45.99947 -45.60715 -41.06145 -39.27895 -38.02480 -36.66321 -34.77312 -32.82780 -32.29326 -31.04403 -28.62238 -27.77283 -24.63058 -24.09886 -23.77433 -21.67380 -20.18032 -18.79292 -18.23908 -17.57656 -16.88904 -16.73760 -16.61995 -16.39241 -15.88401 -15.49916 -14.98538 -14.75833 -14.68521 -14.31661 -14.04362 -13.67448 -13.40730 -12.94935 -12.91156 -12.48478 -12.38880 -12.26817 -11.97463 -11.96988 -11.92032 -11.81626 -11.69159 -11.34946 -11.17068 -10.85762 -10.80092 -10.43941 -10.24022 -10.03462 -9.64622 -9.46058 -8.73273 -8.66089 -8.28139 -6.23096 -4.46419 0.48463 0.77332 1.66084 2.64248 2.81282 3.20200 3.27738 3.31689 3.56446 3.80662 4.10165 4.22686 4.29927 4.53299 4.60166 4.68946 4.70915 4.78062 4.93924 5.04790 5.12972 5.51779 5.67064 5.82374 5.87013 5.92066 6.21581 6.64765 6.88375 7.08663 7.33687 7.49544 7.63801 8.27327 8.49876 8.75575 9.21142 10.68666 Molecular weight = 338.04amu Principal moments of inertia in cm(-1) A = 0.017277 B = 0.003505 C = 0.003160 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1620.252235 B = 7985.913147 C = 8858.118967 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.296 6.296 3 C 0.110 3.890 4 C -0.163 4.163 5 C -0.067 4.067 6 C 0.071 3.929 7 C 0.564 3.436 8 O -0.528 6.528 9 N -0.687 5.687 10 C 0.242 3.758 11 H 0.088 0.912 12 C -0.550 4.550 13 H 0.080 0.920 14 C 0.065 3.935 15 N -0.840 5.840 16 Si 0.916 3.084 17 H -0.268 1.268 18 H -0.280 1.280 19 H -0.280 1.280 20 C 0.417 3.583 21 F -0.135 7.135 22 F -0.207 7.207 23 F -0.218 7.218 24 N -0.411 5.411 25 C 0.147 3.853 26 Cl -0.014 7.014 27 H 0.061 0.939 28 H 0.061 0.939 29 H 0.107 0.893 30 H 0.155 0.845 31 H 0.161 0.839 32 H 0.410 0.590 33 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.744 -14.216 0.073 19.773 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.207 6.207 3 C 0.060 3.940 4 C -0.189 4.189 5 C -0.088 4.088 6 C -0.067 4.067 7 C 0.348 3.652 8 O -0.404 6.404 9 N -0.335 5.335 10 C 0.137 3.863 11 H 0.106 0.894 12 C -0.587 4.587 13 H 0.098 0.902 14 C -0.144 4.144 15 N -0.474 5.474 16 Si 0.742 3.258 17 H -0.193 1.193 18 H -0.206 1.206 19 H -0.206 1.206 20 C 0.361 3.639 21 F -0.116 7.116 22 F -0.189 7.189 23 F -0.200 7.200 24 N -0.125 5.125 25 C -0.022 4.022 26 Cl 0.014 6.986 27 H 0.079 0.921 28 H 0.079 0.921 29 H 0.125 0.875 30 H 0.173 0.827 31 H 0.179 0.821 32 H 0.246 0.754 33 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges -13.023 -13.485 0.121 18.748 hybrid contribution 0.110 -0.442 0.037 0.457 sum -12.913 -13.928 0.159 18.994 Atomic orbital electron populations 1.23224 0.77493 1.04756 1.01844 1.86150 1.21987 1.25049 1.87534 1.19763 0.91403 0.86067 0.96760 1.21670 1.01225 0.90867 1.05163 1.22080 0.93912 0.99404 0.93394 1.21248 0.91598 0.91368 1.02511 1.17662 0.83153 0.86585 0.77839 1.90804 1.67641 1.31543 1.50413 1.45975 1.05058 1.11352 1.71159 1.19843 0.95310 0.83112 0.88045 0.89439 1.20935 0.97012 0.97214 1.43556 0.90169 1.25082 0.99735 0.94910 0.94648 1.70410 1.36474 1.00133 1.40339 0.86139 0.82210 0.78683 0.78731 1.19280 1.20565 1.20554 1.23113 0.72252 0.77157 0.91400 1.93412 1.78317 1.43776 1.96138 1.93001 1.79581 1.66786 1.79555 1.93064 1.42932 1.95623 1.88396 1.66990 1.39990 0.96575 1.08939 1.20852 0.85917 0.89463 1.05946 1.98413 1.73002 1.30584 1.96599 0.92077 0.92078 0.87518 0.82704 0.82130 0.75380 0.92163 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.11 9.83 101.05 0.99 1.10 16 2 O -0.30 -2.81 9.96 -18.92 -0.19 -3.00 16 3 C 0.11 1.25 6.71 -38.81 -0.26 0.99 16 4 C -0.16 -1.61 9.12 -39.19 -0.36 -1.97 16 5 C -0.07 -0.86 9.62 -39.09 -0.38 -1.24 16 6 C 0.07 1.17 6.74 -83.02 -0.56 0.61 16 7 C 0.56 11.49 7.33 -12.30 -0.09 11.40 16 8 O -0.53 -11.95 14.89 5.33 0.08 -11.87 16 9 N -0.69 -14.87 4.97 -55.86 -0.28 -15.15 16 10 C 0.24 6.09 2.21 -69.09 -0.15 5.94 16 11 H 0.09 2.40 7.58 -51.93 -0.39 2.01 16 12 C -0.55 -14.24 8.47 -34.44 -0.29 -14.54 16 13 H 0.08 2.00 7.74 -52.49 -0.41 1.59 16 14 C 0.06 1.70 5.20 -17.82 -0.09 1.60 16 15 N -0.84 -23.00 9.50 55.43 0.53 -22.48 16 16 Si 0.92 20.30 29.54 -169.99 -5.02 15.28 16 17 H -0.27 -5.83 7.11 56.52 0.40 -5.43 16 18 H -0.28 -6.13 7.11 56.52 0.40 -5.73 16 19 H -0.28 -6.22 7.11 56.52 0.40 -5.82 16 20 C 0.42 10.80 2.81 37.16 0.10 10.90 16 21 F -0.14 -3.75 12.91 2.25 0.03 -3.72 16 22 F -0.21 -5.24 16.94 2.25 0.04 -5.20 16 23 F -0.22 -5.54 15.68 2.25 0.04 -5.50 16 24 N -0.41 -6.60 9.50 -6.82 -0.06 -6.67 16 25 C 0.15 2.05 7.29 -17.28 -0.13 1.92 16 26 Cl -0.01 -0.18 28.66 -51.86 -1.49 -1.67 16 27 H 0.06 0.24 7.69 -51.93 -0.40 -0.16 16 28 H 0.06 0.23 7.69 -51.93 -0.40 -0.17 16 29 H 0.11 0.32 8.14 -51.93 -0.42 -0.10 16 30 H 0.16 0.93 6.43 -52.49 -0.34 0.59 16 31 H 0.16 1.89 7.63 -52.49 -0.40 1.49 16 32 H 0.41 8.31 7.86 -40.82 -0.32 7.99 16 33 H 0.27 6.92 8.31 -40.82 -0.34 6.58 16 LS Contribution 318.26 15.07 4.80 4.80 Total: -1.00 -30.64 318.26 -4.96 -35.60 By element: Atomic # 1 Polarization: 5.06 SS G_CDS: -2.21 Total: 2.84 kcal Atomic # 6 Polarization: 17.94 SS G_CDS: -1.21 Total: 16.73 kcal Atomic # 7 Polarization: -44.47 SS G_CDS: 0.18 Total: -44.29 kcal Atomic # 8 Polarization: -14.76 SS G_CDS: -0.11 Total: -14.86 kcal Atomic # 9 Polarization: -14.53 SS G_CDS: 0.10 Total: -14.42 kcal Atomic # 14 Polarization: 20.30 SS G_CDS: -5.02 Total: 15.28 kcal Atomic # 17 Polarization: -0.18 SS G_CDS: -1.49 Total: -1.67 kcal Total LS contribution 4.80 Total: 4.80 kcal Total: -30.64 -4.96 -35.60 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000928807461.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -137.442 kcal (2) G-P(sol) polarization free energy of solvation -30.641 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -168.083 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.958 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.599 kcal (6) G-S(sol) free energy of system = (1) + (5) -173.041 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds