Wall clock time and date at job start Tue Mar 31 2020 21:27:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35746 * 116.99486 * 2 1 4 4 C 1.39140 * 120.38932 * 0.02562 * 3 2 1 5 5 C 1.38375 * 118.46446 * 179.70716 * 4 3 2 6 6 C 1.39414 * 119.15974 * 0.51642 * 5 4 3 7 7 C 1.47913 * 119.65385 * 179.74843 * 6 5 4 8 8 O 1.21552 * 120.00306 * 359.72789 * 7 6 5 9 9 N 1.34781 * 120.00038 * 179.72624 * 7 6 5 10 10 C 1.46500 * 119.99732 * 180.02562 * 9 7 6 11 11 H 1.09000 * 109.47381 * 35.00069 * 10 9 7 12 12 C 1.50699 * 109.46939 * 155.00269 * 10 9 7 13 13 H 1.08003 * 120.00271 * 359.97438 * 12 10 9 14 14 C 1.37879 * 120.00161 * 179.97438 * 12 10 9 15 15 N 1.31509 * 119.99895 * 0.02562 * 14 12 10 16 16 Si 1.86803 * 120.00268 * 179.97438 * 14 12 10 17 17 H 1.48500 * 109.46809 * 0.02562 * 16 14 12 18 18 H 1.48501 * 109.46948 * 120.00386 * 16 14 12 19 19 H 1.48497 * 109.47378 * 240.00673 * 16 14 12 20 20 C 1.53006 * 109.47249 * 274.99921 * 10 9 7 21 21 F 1.39900 * 109.46764 * 60.00158 * 20 10 9 22 22 F 1.39897 * 109.47129 * 180.02562 * 20 10 9 23 23 F 1.39903 * 109.46814 * 300.00629 * 20 10 9 24 24 N 1.32848 * 120.69498 * 359.47395 * 6 5 4 25 25 C 1.31456 * 121.67185 * 0.27401 * 24 6 5 26 26 Cl 1.73605 * 119.60868 * 179.97438 * 25 24 6 27 27 H 1.09001 * 109.47522 * 300.00298 * 1 2 3 28 28 H 1.08999 * 109.47606 * 60.00699 * 1 2 3 29 29 H 1.09005 * 109.46858 * 180.02562 * 1 2 3 30 30 H 1.07999 * 120.77033 * 359.97438 * 4 3 2 31 31 H 1.07999 * 120.42177 * 180.28401 * 5 4 3 32 32 H 0.96998 * 119.99903 * 0.02562 * 9 7 6 33 33 H 0.97006 * 120.00358 * 179.97438 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0451 1.2096 0.0000 4 6 1.2952 2.3815 0.0005 5 6 1.9643 3.5927 0.0067 6 6 3.3584 3.5986 0.0012 7 6 4.0848 4.8871 0.0021 8 8 3.4663 5.9335 0.0026 9 7 5.4325 4.9009 0.0024 10 6 6.1519 6.1771 0.0038 11 1 5.5969 6.9064 0.5939 12 6 7.5202 5.9817 0.6043 13 1 7.8235 5.0047 0.9506 14 6 8.3850 7.0502 0.7116 15 7 8.0156 8.2400 0.2904 16 14 10.0809 6.8082 1.4566 17 1 10.2503 5.3863 1.8500 18 1 11.1171 7.1717 0.4569 19 1 10.2235 7.6740 2.6545 20 6 6.2932 6.6847 -1.4327 21 9 5.0229 6.8660 -1.9901 22 9 6.9806 7.9031 -1.4313 23 9 7.0054 5.7485 -2.1900 24 7 4.0414 2.4591 0.0007 25 6 3.4366 1.2919 -0.0001 26 17 4.3821 -0.1640 -0.0015 27 1 -0.3634 0.5139 0.8899 28 1 -0.3634 0.5137 -0.8900 29 1 -0.3633 -1.0277 0.0005 30 1 0.2157 2.3468 0.0005 31 1 1.4136 4.5217 0.0119 32 1 5.9261 4.0659 0.0016 33 1 8.6239 8.9919 0.3661 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000928807462.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 21:27:03 Heat of formation + Delta-G solvation = -173.047153 kcal Electronic energy + Delta-G solvation = -27273.051267 eV Core-core repulsion = 22525.416645 eV Total energy + Delta-G solvation = -4747.634622 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 338.043 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -48.34465 -45.99817 -45.60809 -41.06232 -39.27825 -38.02459 -36.66316 -34.77229 -32.82878 -32.29404 -31.04457 -28.62194 -27.77244 -24.63021 -24.09904 -23.77463 -21.67359 -20.18037 -18.79315 -18.23882 -17.57657 -16.88859 -16.73752 -16.61924 -16.39197 -15.88361 -15.49864 -14.98736 -14.75743 -14.68504 -14.31646 -14.04319 -13.67246 -13.41036 -12.94887 -12.91046 -12.48402 -12.38807 -12.26778 -11.97476 -11.96942 -11.92000 -11.81617 -11.69225 -11.34946 -11.17055 -10.85763 -10.80082 -10.43938 -10.24062 -10.03498 -9.64616 -9.46064 -8.73301 -8.66150 -8.28135 -6.23096 -4.46421 0.48442 0.77316 1.66068 2.64273 2.81269 3.20189 3.27720 3.31683 3.56461 3.80636 4.10165 4.22679 4.29918 4.53291 4.60198 4.68938 4.70915 4.78055 4.93955 5.04779 5.12946 5.51770 5.67068 5.82362 5.87046 5.92059 6.21662 6.64746 6.88382 7.08670 7.33661 7.49522 7.63774 8.27334 8.49845 8.75581 9.21155 10.68676 Molecular weight = 338.04amu Principal moments of inertia in cm(-1) A = 0.017273 B = 0.003505 C = 0.003160 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1620.600792 B = 7986.326538 C = 8857.997869 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.296 6.296 3 C 0.110 3.890 4 C -0.163 4.163 5 C -0.067 4.067 6 C 0.072 3.928 7 C 0.564 3.436 8 O -0.528 6.528 9 N -0.687 5.687 10 C 0.242 3.758 11 H 0.088 0.912 12 C -0.550 4.550 13 H 0.080 0.920 14 C 0.065 3.935 15 N -0.840 5.840 16 Si 0.916 3.084 17 H -0.268 1.268 18 H -0.280 1.280 19 H -0.280 1.280 20 C 0.417 3.583 21 F -0.218 7.218 22 F -0.135 7.135 23 F -0.207 7.207 24 N -0.411 5.411 25 C 0.147 3.853 26 Cl -0.014 7.014 27 H 0.061 0.939 28 H 0.061 0.939 29 H 0.107 0.893 30 H 0.155 0.845 31 H 0.161 0.839 32 H 0.410 0.590 33 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.743 -14.215 -0.084 19.773 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.207 6.207 3 C 0.060 3.940 4 C -0.189 4.189 5 C -0.088 4.088 6 C -0.067 4.067 7 C 0.348 3.652 8 O -0.404 6.404 9 N -0.335 5.335 10 C 0.137 3.863 11 H 0.106 0.894 12 C -0.587 4.587 13 H 0.098 0.902 14 C -0.144 4.144 15 N -0.474 5.474 16 Si 0.742 3.258 17 H -0.193 1.193 18 H -0.206 1.206 19 H -0.206 1.206 20 C 0.361 3.639 21 F -0.200 7.200 22 F -0.116 7.116 23 F -0.189 7.189 24 N -0.125 5.125 25 C -0.022 4.022 26 Cl 0.014 6.986 27 H 0.079 0.921 28 H 0.079 0.921 29 H 0.125 0.875 30 H 0.173 0.827 31 H 0.179 0.821 32 H 0.246 0.754 33 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges -13.023 -13.484 -0.131 18.747 hybrid contribution 0.110 -0.442 -0.035 0.457 sum -12.913 -13.927 -0.166 18.993 Atomic orbital electron populations 1.23223 0.77497 1.04756 1.01844 1.86151 1.21985 1.25043 1.87538 1.19761 0.91403 0.86067 0.96764 1.21667 1.01226 0.90867 1.05157 1.22078 0.93912 0.99405 0.93398 1.21245 0.91598 0.91369 1.02508 1.17664 0.83154 0.86586 0.77839 1.90806 1.67649 1.31533 1.50414 1.45975 1.05058 1.11351 1.71159 1.19846 0.95307 0.83092 0.88062 0.89443 1.20935 0.97037 0.97174 1.43579 0.90169 1.25079 0.99732 0.94905 0.94651 1.70406 1.36477 1.00099 1.40371 0.86141 0.82215 0.78686 0.78732 1.19278 1.20551 1.20564 1.23112 0.72255 0.77187 0.91367 1.93064 1.42943 1.95614 1.88392 1.93410 1.78325 1.43783 1.96125 1.93002 1.79572 1.66879 1.79471 1.66991 1.39985 0.96575 1.08940 1.20852 0.85919 0.89463 1.05940 1.98413 1.72998 1.30589 1.96599 0.92081 0.92077 0.87517 0.82704 0.82130 0.75380 0.92160 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.11 9.83 101.05 0.99 1.10 16 2 O -0.30 -2.81 9.96 -18.94 -0.19 -3.00 16 3 C 0.11 1.25 6.71 -38.82 -0.26 0.99 16 4 C -0.16 -1.61 9.12 -39.20 -0.36 -1.97 16 5 C -0.07 -0.86 9.62 -39.09 -0.38 -1.24 16 6 C 0.07 1.18 6.74 -83.03 -0.56 0.62 16 7 C 0.56 11.49 7.34 -12.30 -0.09 11.40 16 8 O -0.53 -11.95 14.88 5.32 0.08 -11.87 16 9 N -0.69 -14.87 4.97 -55.85 -0.28 -15.15 16 10 C 0.24 6.09 2.21 -69.08 -0.15 5.94 16 11 H 0.09 2.40 7.58 -51.93 -0.39 2.01 16 12 C -0.55 -14.25 8.46 -34.44 -0.29 -14.54 16 13 H 0.08 2.00 7.74 -52.48 -0.41 1.59 16 14 C 0.06 1.70 5.20 -17.82 -0.09 1.61 16 15 N -0.84 -23.00 9.50 55.43 0.53 -22.48 16 16 Si 0.92 20.30 29.54 -169.99 -5.02 15.28 16 17 H -0.27 -5.83 7.11 56.52 0.40 -5.43 16 18 H -0.28 -6.22 7.11 56.52 0.40 -5.82 16 19 H -0.28 -6.13 7.11 56.52 0.40 -5.73 16 20 C 0.42 10.80 2.81 37.16 0.10 10.91 16 21 F -0.22 -5.54 15.67 2.25 0.04 -5.50 16 22 F -0.14 -3.75 12.91 2.25 0.03 -3.72 16 23 F -0.21 -5.24 16.94 2.25 0.04 -5.20 16 24 N -0.41 -6.60 9.50 -6.83 -0.06 -6.67 16 25 C 0.15 2.05 7.29 -17.28 -0.13 1.92 16 26 Cl -0.01 -0.19 28.66 -51.86 -1.49 -1.67 16 27 H 0.06 0.23 7.69 -51.93 -0.40 -0.17 16 28 H 0.06 0.24 7.69 -51.93 -0.40 -0.16 16 29 H 0.11 0.32 8.14 -51.93 -0.42 -0.10 16 30 H 0.16 0.93 6.43 -52.49 -0.34 0.59 16 31 H 0.16 1.89 7.63 -52.49 -0.40 1.49 16 32 H 0.41 8.31 7.86 -40.82 -0.32 7.99 16 33 H 0.27 6.92 8.31 -40.82 -0.34 6.58 16 LS Contribution 318.26 15.07 4.80 4.80 Total: -1.00 -30.64 318.26 -4.96 -35.60 By element: Atomic # 1 Polarization: 5.06 SS G_CDS: -2.21 Total: 2.84 kcal Atomic # 6 Polarization: 17.94 SS G_CDS: -1.21 Total: 16.73 kcal Atomic # 7 Polarization: -44.47 SS G_CDS: 0.18 Total: -44.29 kcal Atomic # 8 Polarization: -14.76 SS G_CDS: -0.11 Total: -14.86 kcal Atomic # 9 Polarization: -14.53 SS G_CDS: 0.10 Total: -14.43 kcal Atomic # 14 Polarization: 20.30 SS G_CDS: -5.02 Total: 15.28 kcal Atomic # 17 Polarization: -0.19 SS G_CDS: -1.49 Total: -1.67 kcal Total LS contribution 4.80 Total: 4.80 kcal Total: -30.64 -4.96 -35.60 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000928807462.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -137.447 kcal (2) G-P(sol) polarization free energy of solvation -30.643 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -168.089 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.958 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.601 kcal (6) G-S(sol) free energy of system = (1) + (5) -173.047 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds