Wall clock time and date at job start Tue Mar 31 2020 20:37:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 H 1.09000 * 109.47491 * 2 1 4 4 C 1.50698 * 109.47693 * 240.00000 * 2 1 3 5 5 H 1.08003 * 120.00248 * 275.01180 * 4 2 1 6 6 C 1.37879 * 120.00061 * 95.00170 * 4 2 1 7 7 N 1.31514 * 120.00065 * 184.92370 * 6 4 2 8 8 Si 1.86799 * 120.00086 * 4.91820 * 6 4 2 9 9 H 1.48496 * 109.46932 * 84.83083 * 8 6 4 10 10 H 1.48491 * 109.47212 * 204.83377 * 8 6 4 11 11 H 1.48507 * 109.46996 * 324.83552 * 8 6 4 12 12 N 1.46500 * 109.46835 * 120.00006 * 2 1 3 13 13 C 1.34781 * 120.00238 * 274.99456 * 12 2 1 14 14 O 1.21623 * 119.99381 * 0.02562 * 13 12 2 15 15 C 1.47292 * 120.00150 * 180.02562 * 13 12 2 16 16 C 1.39061 * 120.87631 * 359.72083 * 15 13 12 17 17 C 1.39677 * 119.22217 * 179.79323 * 16 15 13 18 18 Br 1.89098 * 119.48609 * 180.23649 * 17 16 15 19 19 C 1.35376 * 121.02781 * 0.50268 * 17 16 15 20 20 N 1.35730 * 121.65945 * 359.73398 * 19 17 16 21 21 N 1.40238 * 133.24173 * 180.02562 * 20 19 17 22 22 C 1.31160 * 107.08490 * 180.02562 * 21 20 19 23 23 N 1.32729 * 109.59424 * 359.97438 * 22 21 20 24 24 C 1.32297 * 109.66343 * 0.02562 * 23 22 21 25 25 H 1.09002 * 109.47365 * 175.03440 * 1 2 3 26 26 H 1.09001 * 109.46944 * 55.03325 * 1 2 3 27 27 H 1.08998 * 109.47309 * 295.04120 * 1 2 3 28 28 H 0.96997 * 119.99915 * 179.97438 * 7 6 4 29 29 H 0.97001 * 119.99838 * 95.00168 * 12 2 1 30 30 H 1.08000 * 120.39070 * 0.02562 * 16 15 13 31 31 H 1.07995 * 119.16726 * 179.75873 * 19 17 16 32 32 H 1.07997 * 125.20583 * 179.97438 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 6 2.0324 -0.7104 -1.2304 5 1 2.1355 -1.7855 -1.2291 6 6 2.3604 0.0121 -2.3580 7 7 2.7061 -0.6131 -3.4622 8 14 2.3137 1.8791 -2.3174 9 1 3.5992 2.3948 -1.7820 10 1 2.1061 2.3991 -3.6927 11 1 1.1987 2.3275 -1.4449 12 7 2.0182 -0.6906 1.1962 13 6 2.1470 -0.0183 2.3572 14 8 1.8574 1.1617 2.4118 15 6 2.6385 -0.7125 3.5597 16 6 2.9693 -2.0626 3.5192 17 6 3.4362 -2.6854 4.6790 18 35 3.8946 -4.5193 4.6306 19 6 3.5605 -1.9978 5.8385 20 7 3.2441 -0.6806 5.9231 21 7 3.2777 0.2501 6.9716 22 6 2.8570 1.3934 6.4856 23 7 2.5603 1.2484 5.2001 24 6 2.7852 -0.0016 4.8295 25 1 -0.3634 -1.0238 -0.0890 26 1 -0.3633 0.5890 -0.8422 27 1 -0.3634 0.4350 0.9310 28 1 2.9365 -0.1048 -4.2555 29 1 2.2489 -1.6318 1.1526 30 1 2.8701 -2.6221 2.6008 31 1 3.9208 -2.5102 6.7182 32 1 2.7660 2.3123 7.0457 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000931156410.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:37:20 Heat of formation + Delta-G solvation = 95.991091 kcal Electronic energy + Delta-G solvation = -20529.131359 eV Core-core repulsion = 17152.884917 eV Total energy + Delta-G solvation = -3376.246442 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 338.012 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -42.88898 -39.28488 -37.96187 -34.98226 -33.81805 -32.62770 -32.36520 -30.89067 -29.72309 -29.07695 -25.41226 -25.09370 -23.57856 -22.76187 -21.10573 -19.84366 -18.37047 -17.85791 -17.27813 -16.52698 -16.49776 -15.93561 -15.30299 -14.51118 -14.36211 -14.19111 -13.55317 -13.42944 -13.18959 -12.78010 -12.53762 -12.45953 -12.05664 -11.62908 -11.39859 -11.14202 -10.95375 -10.90266 -10.83117 -10.60455 -10.23434 -9.90665 -9.70948 -9.39361 -9.24885 -8.74172 -8.58621 -8.16948 -6.27185 -4.31707 -0.09950 0.49050 0.73793 1.89078 2.23595 2.75851 3.24970 3.33917 3.41538 3.42363 3.57176 3.69310 3.96348 4.07485 4.30397 4.53040 4.58107 4.86673 5.12143 5.18798 5.42525 5.60621 5.90233 6.03626 6.25741 6.31408 6.49052 6.63884 6.88835 7.12415 7.30570 7.46162 7.71419 8.03799 8.44712 8.71266 8.81025 9.34325 10.84125 Molecular weight = 338.01amu Principal moments of inertia in cm(-1) A = 0.012546 B = 0.004156 C = 0.003271 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2231.325315 B = 6736.373800 C = 8558.455000 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.232 3.768 3 H 0.053 0.947 4 C -0.532 4.532 5 H 0.080 0.920 6 C 0.083 3.917 7 N -0.886 5.886 8 Si 0.872 3.128 9 H -0.272 1.272 10 H -0.285 1.285 11 H -0.259 1.259 12 N -0.694 5.694 13 C 0.546 3.454 14 O -0.515 6.515 15 C -0.085 4.085 16 C -0.016 4.016 17 C -0.141 4.141 18 Br 0.003 6.997 19 C 0.168 3.832 20 N -0.297 5.297 21 N -0.336 5.336 22 C 0.240 3.760 23 N -0.501 5.501 24 C 0.318 3.682 25 H 0.048 0.952 26 H 0.054 0.946 27 H 0.030 0.970 28 H 0.269 0.731 29 H 0.391 0.609 30 H 0.168 0.832 31 H 0.181 0.819 32 H 0.232 0.768 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.796 -8.520 19.792 21.728 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C 0.131 3.869 3 H 0.071 0.929 4 C -0.570 4.570 5 H 0.098 0.902 6 C -0.121 4.121 7 N -0.522 5.522 8 Si 0.699 3.301 9 H -0.198 1.198 10 H -0.211 1.211 11 H -0.183 1.183 12 N -0.344 5.344 13 C 0.329 3.671 14 O -0.392 6.392 15 C -0.093 4.093 16 C -0.043 4.043 17 C -0.226 4.226 18 Br 0.087 6.913 19 C 0.037 3.963 20 N -0.072 5.072 21 N -0.165 5.165 22 C -0.060 4.060 23 N -0.227 5.227 24 C 0.060 3.940 25 H 0.067 0.933 26 H 0.073 0.927 27 H 0.049 0.951 28 H 0.078 0.922 29 H 0.225 0.775 30 H 0.185 0.815 31 H 0.198 0.802 32 H 0.248 0.752 Dipole moment (debyes) X Y Z Total from point charges 2.873 -7.937 20.204 21.896 hybrid contribution 0.150 0.679 -0.107 0.704 sum 3.022 -7.258 20.097 21.580 Atomic orbital electron populations 1.22222 0.98274 1.00726 0.99490 1.19206 0.91102 0.94450 0.82169 0.92900 1.20972 1.45547 0.95639 0.94807 0.90178 1.24922 0.93448 0.98648 0.95131 1.69873 1.44395 1.36276 1.01695 0.86920 0.79976 0.85780 0.77461 1.19761 1.21135 1.18328 1.46635 1.64674 1.13745 1.09356 1.17517 0.80019 0.87053 0.82482 1.90857 1.49490 1.14589 1.84263 1.20704 1.04704 0.92311 0.91579 1.21809 0.91791 0.92674 0.98037 1.21004 1.11760 0.94566 0.95256 1.96853 1.92072 1.03356 1.98978 1.21315 0.94921 0.80914 0.99178 1.47829 1.41652 1.08316 1.09441 1.78561 1.31755 0.99342 1.06857 1.26508 0.92323 0.97032 0.90146 1.71079 1.25965 1.13766 1.11896 1.22628 0.94241 0.88351 0.88792 0.93286 0.92702 0.95063 0.92156 0.77451 0.81483 0.80238 0.75243 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.15 9.47 37.15 0.35 -2.80 16 2 C 0.23 5.35 2.22 -69.09 -0.15 5.20 16 3 H 0.05 1.34 4.73 -51.93 -0.25 1.10 16 4 C -0.53 -13.71 9.05 -34.44 -0.31 -14.02 16 5 H 0.08 2.15 8.06 -52.48 -0.42 1.73 16 6 C 0.08 2.27 5.47 -17.82 -0.10 2.17 16 7 N -0.89 -25.41 13.96 55.43 0.77 -24.64 16 8 Si 0.87 21.18 26.99 -169.99 -4.59 16.59 16 9 H -0.27 -6.66 7.11 56.52 0.40 -6.26 16 10 H -0.29 -6.80 7.11 56.52 0.40 -6.40 16 11 H -0.26 -6.21 6.82 56.52 0.39 -5.82 16 12 N -0.69 -13.35 5.02 -56.05 -0.28 -13.63 16 13 C 0.55 10.62 7.74 -12.58 -0.10 10.52 16 14 O -0.52 -12.08 15.89 5.26 0.08 -12.00 16 15 C -0.08 -1.31 6.06 -102.69 -0.62 -1.94 16 16 C -0.02 -0.19 9.36 -38.74 -0.36 -0.55 16 17 C -0.14 -1.36 6.16 -40.07 -0.25 -1.61 16 18 Br 0.00 0.03 33.64 -68.01 -2.29 -2.26 16 19 C 0.17 1.66 10.82 -16.85 -0.18 1.48 16 20 N -0.30 -3.95 3.90 -10.94 -0.04 -3.99 16 21 N -0.34 -4.44 12.78 29.27 0.37 -4.06 16 22 C 0.24 3.10 12.98 -91.89 -1.19 1.91 16 23 N -0.50 -8.53 10.68 -12.53 -0.13 -8.67 16 24 C 0.32 5.12 7.72 -154.45 -1.19 3.92 16 25 H 0.05 0.96 8.14 -51.93 -0.42 0.54 16 26 H 0.05 1.18 8.14 -51.93 -0.42 0.75 16 27 H 0.03 0.64 8.14 -51.93 -0.42 0.21 16 28 H 0.27 7.26 8.31 -40.82 -0.34 6.92 16 29 H 0.39 6.29 6.70 -40.82 -0.27 6.01 16 30 H 0.17 1.60 6.49 -52.49 -0.34 1.26 16 31 H 0.18 1.20 8.05 -52.49 -0.42 0.78 16 32 H 0.23 1.84 8.06 -52.49 -0.42 1.42 16 LS Contribution 305.76 15.07 4.61 4.61 Total: -1.00 -33.38 305.76 -8.15 -41.53 By element: Atomic # 1 Polarization: 4.79 SS G_CDS: -2.55 Total: 2.24 kcal Atomic # 6 Polarization: 8.39 SS G_CDS: -4.11 Total: 4.28 kcal Atomic # 7 Polarization: -55.67 SS G_CDS: 0.69 Total: -54.99 kcal Atomic # 8 Polarization: -12.08 SS G_CDS: 0.08 Total: -12.00 kcal Atomic # 14 Polarization: 21.18 SS G_CDS: -4.59 Total: 16.59 kcal Atomic # 35 Polarization: 0.03 SS G_CDS: -2.29 Total: -2.26 kcal Total LS contribution 4.61 Total: 4.61 kcal Total: -33.38 -8.15 -41.53 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000931156410.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 137.519 kcal (2) G-P(sol) polarization free energy of solvation -33.378 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 104.141 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.150 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.528 kcal (6) G-S(sol) free energy of system = (1) + (5) 95.991 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds