Wall clock time and date at job start Tue Mar 31 2020 20:06:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.37095 * 119.99796 * 2 1 4 4 H 1.08001 * 120.00261 * 204.39244 * 3 2 1 5 5 C 1.38953 * 120.00438 * 24.39123 * 3 2 1 6 6 N 1.31417 * 119.99718 * 12.64386 * 5 3 2 7 7 Si 1.86794 * 120.00342 * 192.64274 * 5 3 2 8 8 H 1.48499 * 109.47253 * 90.00423 * 7 5 3 9 9 H 1.48503 * 109.47084 * 210.00048 * 7 5 3 10 10 H 1.48494 * 109.47361 * 330.00083 * 7 5 3 11 11 C 1.34773 * 120.00192 * 179.97438 * 2 1 3 12 12 O 1.21289 * 119.99954 * 179.97438 * 11 2 1 13 13 C 1.50695 * 119.99821 * 0.02562 * 11 2 1 14 14 O 1.42903 * 109.47003 * 179.97438 * 13 11 2 15 15 C 1.35727 * 116.99823 * 179.97438 * 14 13 11 16 16 N 1.32254 * 119.67127 * 359.97438 * 15 14 13 17 17 C 1.32035 * 121.65702 * 180.02562 * 16 15 14 18 18 Cl 1.73602 * 119.59614 * 180.02562 * 17 16 15 19 19 C 1.38354 * 120.81015 * 359.73747 * 17 16 15 20 20 Cl 1.73595 * 120.37569 * 180.26387 * 19 17 16 21 21 C 1.38822 * 119.25459 * 0.51005 * 19 17 16 22 22 C 1.38545 * 118.47794 * 359.50436 * 21 19 17 23 23 Cl 1.73598 * 120.42827 * 180.22493 * 22 21 19 24 24 H 1.08998 * 109.47026 * 265.86367 * 1 2 3 25 25 H 1.09001 * 109.47636 * 25.86437 * 1 2 3 26 26 H 1.09004 * 109.47502 * 145.86570 * 1 2 3 27 27 H 0.96998 * 120.00029 * 179.97438 * 6 5 3 28 28 H 1.08999 * 109.47541 * 60.00134 * 13 11 2 29 29 H 1.09002 * 109.47193 * 299.99400 * 13 11 2 30 30 H 1.08001 * 120.75701 * 179.77718 * 21 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1504 1.1873 0.0000 4 1 3.1581 1.2291 -0.3863 5 6 1.5487 2.3370 0.4969 6 7 0.4344 2.2492 1.1881 7 14 2.3236 4.0073 0.1826 8 1 1.7867 4.5720 -1.0816 9 1 2.0032 4.9214 1.3083 10 1 3.7966 3.8566 0.0711 11 6 2.1389 -1.1671 0.0005 12 8 3.3518 -1.1671 0.0001 13 6 1.3854 -2.4722 0.0005 14 8 2.3141 -3.5584 0.0005 15 6 1.7953 -4.8126 0.0011 16 7 0.4832 -4.9783 0.0021 17 6 -0.0635 -6.1802 0.0031 18 17 -1.7925 -6.3357 0.0037 19 6 0.7248 -7.3172 -0.0022 20 17 -0.0059 -8.8919 -0.0077 21 6 2.1066 -7.1847 0.0020 22 6 2.6480 -5.9094 0.0010 23 17 4.3694 -5.6851 0.0002 24 1 -0.3633 -0.0741 1.0250 25 1 -0.3634 0.9247 -0.4483 26 1 -0.3634 -0.8506 -0.5767 27 1 0.0146 3.0517 1.5353 28 1 0.7591 -2.5302 -0.8897 29 1 0.7585 -2.5298 0.8903 30 1 2.7450 -8.0559 0.0016 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001177755771.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:06:09 Heat of formation + Delta-G solvation = -35.891529 kcal Electronic energy + Delta-G solvation = -21605.877286 eV Core-core repulsion = 17708.490139 eV Total energy + Delta-G solvation = -3897.387147 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 337.978 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -41.13170 -38.96917 -37.80485 -37.07151 -36.93232 -36.63004 -34.70897 -32.85139 -31.79057 -30.66085 -28.23058 -26.20457 -24.66856 -23.98163 -23.52557 -19.56845 -18.84317 -17.78023 -17.27657 -16.93364 -16.55783 -16.13523 -15.56193 -15.00809 -14.77635 -14.33426 -14.11149 -13.80861 -13.73008 -13.20614 -12.83093 -12.47574 -12.22562 -11.98557 -11.86281 -11.55256 -11.43164 -11.39470 -11.34028 -11.19966 -10.92651 -10.77855 -10.39327 -10.36799 -10.30188 -10.05694 -9.08570 -8.61890 -8.51541 -7.77126 -6.40315 -3.97558 0.23547 0.48816 1.20629 1.41042 1.92324 2.65530 2.92681 3.12594 3.22544 3.28387 3.72532 3.82252 4.07358 4.19170 4.33900 4.75354 4.85315 4.95212 5.02849 5.36009 5.49311 5.55656 5.69220 6.23272 6.74904 6.83881 7.05810 7.10764 7.50114 8.02947 8.38453 9.08124 9.28589 9.83195 10.64520 Molecular weight = 337.98amu Principal moments of inertia in cm(-1) A = 0.018219 B = 0.003005 C = 0.002598 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1536.504759 B = 9315.378041 C =10774.899458 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.106 3.894 2 N -0.437 5.437 3 C -0.307 4.307 4 H 0.101 0.899 5 C 0.032 3.968 6 N -0.879 5.879 7 Si 0.930 3.070 8 H -0.277 1.277 9 H -0.283 1.283 10 H -0.268 1.268 11 C 0.445 3.555 12 O -0.567 6.567 13 C 0.058 3.942 14 O -0.251 6.251 15 C 0.369 3.631 16 N -0.508 5.508 17 C 0.231 3.769 18 Cl 0.001 6.999 19 C -0.116 4.116 20 Cl -0.029 7.029 21 C -0.012 4.012 22 C -0.102 4.102 23 Cl -0.013 7.013 24 H 0.055 0.945 25 H 0.079 0.921 26 H 0.027 0.973 27 H 0.269 0.731 28 H 0.087 0.913 29 H 0.090 0.910 30 H 0.171 0.829 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.813 -20.424 -2.298 20.904 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.038 4.038 2 N -0.158 5.158 3 C -0.435 4.435 4 H 0.118 0.882 5 C -0.172 4.172 6 N -0.518 5.518 7 Si 0.756 3.244 8 H -0.203 1.203 9 H -0.209 1.209 10 H -0.192 1.192 11 C 0.231 3.769 12 O -0.451 6.451 13 C -0.020 4.020 14 O -0.153 6.153 15 C 0.187 3.813 16 N -0.236 5.236 17 C 0.066 3.934 18 Cl 0.030 6.970 19 C -0.147 4.147 20 Cl 0.000 7.000 21 C -0.038 4.038 22 C -0.133 4.133 23 Cl 0.016 6.984 24 H 0.074 0.926 25 H 0.098 0.902 26 H 0.045 0.955 27 H 0.079 0.921 28 H 0.105 0.895 29 H 0.108 0.892 30 H 0.188 0.812 Dipole moment (debyes) X Y Z Total from point charges -3.651 -19.514 -2.202 19.975 hybrid contribution 0.160 0.146 0.007 0.217 sum -3.491 -19.368 -2.195 19.802 Atomic orbital electron populations 1.21584 0.80886 1.00348 1.00948 1.43454 1.05592 1.04081 1.62648 1.19677 1.00894 0.83545 1.39353 0.88152 1.25385 0.96611 1.00270 0.94887 1.69991 1.19087 1.29874 1.32848 0.85867 0.79725 0.80906 0.77889 1.20256 1.20863 1.19235 1.19478 0.88138 0.83871 0.85409 1.90579 1.13337 1.86487 1.54657 1.22700 0.91137 0.84419 1.03768 1.86504 1.34189 1.09952 1.84699 1.19544 0.85762 0.87022 0.88927 1.67028 1.11408 1.24623 1.20555 1.21187 0.88506 0.87577 0.96158 1.98450 1.05516 1.97180 1.95834 1.21191 0.92664 0.87753 1.13135 1.98395 1.82331 1.22316 1.97003 1.21212 0.92547 0.96568 0.93448 1.20795 0.88357 0.91863 1.12272 1.98431 1.06096 1.97232 1.96656 0.92612 0.90233 0.95462 0.92056 0.89532 0.89191 0.81189 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.11 2.30 8.44 59.85 0.51 2.80 16 2 N -0.44 -11.08 3.01 -122.20 -0.37 -11.45 16 3 C -0.31 -8.45 9.24 -14.93 -0.14 -8.59 16 4 H 0.10 2.89 7.45 -52.49 -0.39 2.50 16 5 C 0.03 0.84 5.04 -17.46 -0.09 0.75 16 6 N -0.88 -22.97 10.83 55.50 0.60 -22.37 16 7 Si 0.93 20.41 29.57 -169.99 -5.03 15.39 16 8 H -0.28 -5.92 7.11 56.52 0.40 -5.52 16 9 H -0.28 -6.14 7.11 56.52 0.40 -5.74 16 10 H -0.27 -5.94 7.11 56.52 0.40 -5.54 16 11 C 0.44 10.91 7.70 -10.99 -0.08 10.83 16 12 O -0.57 -16.02 16.21 -14.36 -0.23 -16.25 16 13 C 0.06 1.11 4.40 36.00 0.16 1.27 16 14 O -0.25 -4.71 9.12 -38.80 -0.35 -5.06 16 15 C 0.37 5.66 7.48 -17.11 -0.13 5.53 16 16 N -0.51 -7.36 9.19 -10.39 -0.10 -7.46 16 17 C 0.23 2.82 7.27 -17.42 -0.13 2.69 16 18 Cl 0.00 0.01 28.11 -51.86 -1.46 -1.44 16 19 C -0.12 -1.20 6.34 -39.32 -0.25 -1.45 16 20 Cl -0.03 -0.25 27.98 -51.86 -1.45 -1.70 16 21 C -0.01 -0.11 9.77 -39.25 -0.38 -0.50 16 22 C -0.10 -1.31 6.36 -39.21 -0.25 -1.55 16 23 Cl -0.01 -0.17 28.54 -51.86 -1.48 -1.65 16 24 H 0.06 1.23 7.83 -51.93 -0.41 0.83 16 25 H 0.08 1.81 6.80 -51.93 -0.35 1.46 16 26 H 0.03 0.48 6.61 -51.93 -0.34 0.14 16 27 H 0.27 6.65 8.31 -40.82 -0.34 6.31 16 28 H 0.09 1.49 7.37 -51.93 -0.38 1.11 16 29 H 0.09 1.61 8.07 -51.93 -0.42 1.19 16 30 H 0.17 1.11 8.06 -52.49 -0.42 0.69 16 LS Contribution 316.43 15.07 4.77 4.77 Total: -1.00 -30.29 316.43 -7.73 -38.02 By element: Atomic # 1 Polarization: -0.71 SS G_CDS: -1.85 Total: -2.56 kcal Atomic # 6 Polarization: 12.56 SS G_CDS: -0.78 Total: 11.78 kcal Atomic # 7 Polarization: -41.42 SS G_CDS: 0.14 Total: -41.28 kcal Atomic # 8 Polarization: -20.73 SS G_CDS: -0.59 Total: -21.31 kcal Atomic # 14 Polarization: 20.41 SS G_CDS: -5.03 Total: 15.39 kcal Atomic # 17 Polarization: -0.41 SS G_CDS: -4.39 Total: -4.80 kcal Total LS contribution 4.77 Total: 4.77 kcal Total: -30.29 -7.73 -38.02 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001177755771.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.131 kcal (2) G-P(sol) polarization free energy of solvation -30.290 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.159 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.732 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.022 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.892 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds