Wall clock time and date at job start Tue Mar 31 2020 20:12:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13595 * 1 3 3 C 1.43201 * 179.97438 * 2 1 4 4 C 1.39664 * 120.14619 * 332.82545 * 3 2 1 5 5 C 1.37928 * 119.86588 * 179.70712 * 4 3 2 6 6 C 1.38368 * 120.16318 * 0.54234 * 5 4 3 7 7 C 1.50699 * 119.85432 * 179.72150 * 6 5 4 8 8 N 1.46500 * 109.47633 * 260.08171 * 7 6 5 9 9 C 1.36927 * 119.99977 * 264.18751 * 8 7 6 10 10 H 1.07998 * 120.00266 * 323.54376 * 9 8 7 11 11 C 1.38811 * 120.00072 * 143.54884 * 9 8 7 12 12 N 1.31628 * 119.99886 * 158.47918 * 11 9 8 13 13 Si 1.86796 * 120.00112 * 338.48064 * 11 9 8 14 14 H 1.48500 * 109.47532 * 95.27650 * 13 11 9 15 15 H 1.48502 * 109.47136 * 215.27791 * 13 11 9 16 16 H 1.48507 * 109.47067 * 335.27671 * 13 11 9 17 17 C 1.46501 * 119.99580 * 83.90432 * 8 7 6 18 18 C 1.50700 * 109.46814 * 84.52301 * 17 8 7 19 19 O 1.20823 * 120.00157 * 359.97438 * 18 17 8 20 20 O 1.34227 * 120.00022 * 179.97438 * 18 17 8 21 21 C 1.38432 * 120.29417 * 359.45819 * 6 5 4 22 22 Br 1.89099 * 119.93371 * 180.29620 * 21 6 5 23 23 C 1.38060 * 120.12867 * 0.26377 * 21 6 5 24 24 H 1.07997 * 120.06265 * 359.97438 * 4 3 2 25 25 H 1.07995 * 119.91856 * 180.27031 * 5 4 3 26 26 H 1.09000 * 109.46733 * 140.08043 * 7 6 5 27 27 H 1.09000 * 109.46824 * 20.08734 * 7 6 5 28 28 H 0.97000 * 119.99611 * 179.97438 * 12 11 9 29 29 H 1.08996 * 109.46831 * 204.51363 * 17 8 7 30 30 H 1.08997 * 109.47302 * 324.51918 * 17 8 7 31 31 H 0.96698 * 117.00016 * 179.97438 * 20 18 17 32 32 H 1.08003 * 120.07655 * 179.97438 * 23 21 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2698 -1.0735 0.5516 5 6 4.6491 -1.0697 0.5431 6 6 5.3380 0.0003 -0.0002 7 6 6.8450 0.0001 -0.0002 8 7 7.3336 0.8281 1.1052 9 6 7.6753 2.1352 0.8825 10 1 8.1499 2.4187 -0.0452 11 6 7.4116 3.0959 1.8491 12 7 8.0838 4.2276 1.8528 13 14 6.1029 2.7827 3.1447 14 1 6.7406 2.2418 4.3719 15 1 5.4106 4.0563 3.4670 16 1 5.1171 1.8010 2.6253 17 6 7.4507 0.2592 2.4502 18 6 8.7707 -0.4562 2.5798 19 8 9.5349 -0.4881 1.6446 20 8 9.0974 -1.0580 3.7343 21 6 4.6491 1.0685 -0.5487 22 35 5.6010 2.5215 -1.2959 23 6 3.2686 1.0746 -0.5517 24 1 2.7336 -1.9073 0.9800 25 1 5.1927 -1.9018 0.9654 26 1 7.2084 0.4043 -0.9450 27 1 7.2082 -1.0204 0.1220 28 1 7.8993 4.8990 2.5281 29 1 7.3969 1.0590 3.1888 30 1 6.6369 -0.4462 2.6185 31 1 9.9544 -1.5044 3.7694 32 1 2.7320 1.9086 -0.9795 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001610622474.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:12:39 Heat of formation + Delta-G solvation = 3.238905 kcal Electronic energy + Delta-G solvation = -21024.029840 eV Core-core repulsion = 17611.468610 eV Total energy + Delta-G solvation = -3412.561230 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 338.005 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -39.70635 -39.31459 -36.78674 -35.97305 -35.13412 -32.50767 -32.01334 -31.22570 -29.03318 -28.11128 -26.36173 -23.36901 -22.46529 -21.82977 -20.36580 -18.68103 -17.52143 -17.20244 -16.26224 -15.69795 -15.47921 -15.34869 -14.60876 -14.44083 -14.35878 -13.92262 -13.47350 -13.19818 -13.01813 -12.75629 -12.53332 -12.50063 -12.36470 -11.71016 -11.51816 -11.21523 -10.95605 -10.81502 -10.70532 -10.53479 -10.19401 -9.95662 -9.73298 -9.38081 -8.87031 -8.72915 -8.27971 -7.22735 -6.14405 -3.54884 0.76297 1.24291 2.11183 2.66662 2.89145 2.93919 3.14562 3.35520 3.37450 3.63197 3.84298 3.88334 4.33725 4.76459 4.82003 4.92173 5.07535 5.26410 5.37022 5.60229 5.71194 5.76413 5.87756 5.97018 6.01935 6.12698 6.24518 6.40847 6.57651 6.73984 7.09201 7.43993 7.73606 8.17997 8.55908 8.76191 9.47938 9.76138 10.99352 Molecular weight = 338.01amu Principal moments of inertia in cm(-1) A = 0.012135 B = 0.006443 C = 0.005436 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2306.752143 B = 4344.650182 C = 5149.773432 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.431 5.431 2 C 0.266 3.734 3 C -0.049 4.049 4 C -0.061 4.061 5 C -0.120 4.120 6 C -0.035 4.035 7 C 0.169 3.831 8 N -0.559 5.559 9 C -0.254 4.254 10 H 0.095 0.905 11 C 0.047 3.953 12 N -0.883 5.883 13 Si 0.847 3.153 14 H -0.283 1.283 15 H -0.294 1.294 16 H -0.259 1.259 17 C 0.139 3.861 18 C 0.444 3.556 19 O -0.502 6.502 20 O -0.535 6.535 21 C -0.077 4.077 22 Br -0.006 7.006 23 C -0.048 4.048 24 H 0.131 0.869 25 H 0.135 0.865 26 H 0.087 0.913 27 H 0.060 0.940 28 H 0.266 0.734 29 H 0.099 0.901 30 H 0.082 0.918 31 H 0.391 0.609 32 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.862 -9.276 -2.946 10.879 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.107 5.107 2 C -0.049 4.049 3 C -0.054 4.054 4 C -0.082 4.082 5 C -0.140 4.140 6 C -0.041 4.041 7 C 0.043 3.957 8 N -0.276 5.276 9 C -0.382 4.382 10 H 0.112 0.888 11 C -0.155 4.155 12 N -0.523 5.523 13 Si 0.676 3.324 14 H -0.211 1.211 15 H -0.221 1.221 16 H -0.183 1.183 17 C 0.010 3.990 18 C 0.283 3.717 19 O -0.388 6.388 20 O -0.346 6.346 21 C -0.157 4.157 22 Br 0.080 6.920 23 C -0.071 4.071 24 H 0.149 0.851 25 H 0.153 0.847 26 H 0.105 0.895 27 H 0.078 0.922 28 H 0.076 0.924 29 H 0.117 0.883 30 H 0.100 0.900 31 H 0.249 0.751 32 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -6.349 -8.299 -3.477 11.012 hybrid contribution -0.004 -0.536 1.256 1.366 sum -6.353 -8.834 -2.221 11.106 Atomic orbital electron populations 1.81218 1.12052 1.08054 1.09353 1.25670 0.92561 0.93422 0.93266 1.15788 0.84117 0.98069 1.07392 1.21152 0.94348 0.96410 0.96250 1.20985 0.93239 0.98752 1.01016 1.21300 1.00017 0.91218 0.91563 1.20316 0.85283 0.95902 0.94163 1.43856 1.70708 1.09780 1.03304 1.18842 1.33380 0.80232 1.05792 0.88766 1.25353 0.97187 0.95173 0.97776 1.69818 1.38836 1.08409 1.35205 0.87361 0.84907 0.77970 0.82132 1.21064 1.22106 1.18306 1.21173 0.89834 0.97223 0.90755 1.26019 0.91319 0.75379 0.79019 1.90627 1.51635 1.56419 1.40105 1.84674 1.42293 1.66748 1.40904 1.21731 0.93639 0.96165 1.04214 1.96864 1.74500 1.39247 1.81349 1.21093 0.92569 0.96852 0.96591 0.85060 0.84672 0.89515 0.92199 0.92379 0.88341 0.89994 0.75119 0.84640 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -6.55 18.54 41.84 0.78 -5.78 16 2 C 0.27 3.59 15.33 -22.47 -0.34 3.25 16 3 C -0.05 -0.62 5.73 -106.93 -0.61 -1.24 16 4 C -0.06 -0.69 9.76 -39.16 -0.38 -1.07 16 5 C -0.12 -1.47 9.65 -39.65 -0.38 -1.85 16 6 C -0.03 -0.53 5.46 -104.50 -0.57 -1.10 16 7 C 0.17 2.85 5.32 -5.19 -0.03 2.82 16 8 N -0.56 -11.42 1.59 -175.99 -0.28 -11.70 16 9 C -0.25 -6.14 7.38 -15.06 -0.11 -6.25 16 10 H 0.09 2.51 7.73 -52.49 -0.41 2.11 16 11 C 0.05 1.21 5.30 -17.43 -0.09 1.12 16 12 N -0.88 -24.70 13.97 55.49 0.78 -23.92 16 13 Si 0.85 19.63 24.92 -169.99 -4.24 15.40 16 14 H -0.28 -6.39 6.67 56.52 0.38 -6.02 16 15 H -0.29 -7.14 7.11 56.52 0.40 -6.74 16 16 H -0.26 -5.70 7.11 56.52 0.40 -5.30 16 17 C 0.14 2.65 4.90 -5.19 -0.03 2.63 16 18 C 0.44 8.28 8.39 36.01 0.30 8.58 16 19 O -0.50 -10.80 17.16 -18.75 -0.32 -11.12 16 20 O -0.53 -8.05 13.42 -39.25 -0.53 -8.58 16 21 C -0.08 -1.21 6.21 -39.58 -0.25 -1.45 16 22 Br -0.01 -0.11 29.16 -68.01 -1.98 -2.09 16 23 C -0.05 -0.67 9.49 -39.14 -0.37 -1.04 16 24 H 0.13 1.14 8.06 -52.49 -0.42 0.71 16 25 H 0.14 1.32 8.03 -52.49 -0.42 0.90 16 26 H 0.09 1.52 6.96 -51.93 -0.36 1.16 16 27 H 0.06 0.90 7.97 -51.93 -0.41 0.49 16 28 H 0.27 7.14 8.31 -40.82 -0.34 6.80 16 29 H 0.10 2.09 3.31 -51.93 -0.17 1.92 16 30 H 0.08 1.30 8.11 -51.93 -0.42 0.88 16 31 H 0.39 4.12 9.10 45.56 0.41 4.53 16 32 H 0.14 1.69 8.06 -52.48 -0.42 1.27 16 LS Contribution 308.20 15.07 4.64 4.64 Total: -1.00 -30.24 308.20 -5.80 -36.04 By element: Atomic # 1 Polarization: 4.50 SS G_CDS: -1.79 Total: 2.71 kcal Atomic # 6 Polarization: 7.25 SS G_CDS: -2.86 Total: 4.39 kcal Atomic # 7 Polarization: -42.67 SS G_CDS: 1.27 Total: -41.40 kcal Atomic # 8 Polarization: -18.84 SS G_CDS: -0.85 Total: -19.69 kcal Atomic # 14 Polarization: 19.63 SS G_CDS: -4.24 Total: 15.40 kcal Atomic # 35 Polarization: -0.11 SS G_CDS: -1.98 Total: -2.09 kcal Total LS contribution 4.64 Total: 4.64 kcal Total: -30.24 -5.80 -36.04 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001610622474.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.282 kcal (2) G-P(sol) polarization free energy of solvation -30.240 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.043 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.804 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.043 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.239 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds