Wall clock time and date at job start Tue Mar 31 2020 21:20:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17398 * 1 3 3 C 1.47203 * 179.97438 * 2 1 4 4 N 1.46506 * 109.47039 * 12.05776 * 3 2 1 5 5 C 1.37095 * 119.99842 * 85.32030 * 4 3 2 6 6 H 1.07998 * 120.00540 * 214.20345 * 5 4 3 7 7 C 1.38956 * 120.00097 * 34.20871 * 5 4 3 8 8 N 1.31406 * 119.99973 * 24.39324 * 7 5 4 9 9 Si 1.86798 * 120.00080 * 204.39465 * 7 5 4 10 10 H 1.48500 * 109.47016 * 94.99701 * 9 7 5 11 11 H 1.48497 * 109.47459 * 214.99637 * 9 7 5 12 12 H 1.48497 * 109.47306 * 334.99942 * 9 7 5 13 13 C 1.34775 * 120.00013 * 265.32255 * 4 3 2 14 14 O 1.21291 * 119.99983 * 184.58596 * 13 4 3 15 15 C 1.50695 * 119.99985 * 4.59255 * 13 4 3 16 16 H 1.08998 * 109.47508 * 43.87082 * 15 13 4 17 17 C 1.50708 * 109.46825 * 283.87590 * 15 13 4 18 18 C 1.38453 * 120.01861 * 315.45426 * 17 15 13 19 19 F 1.35105 * 120.02261 * 359.97438 * 18 17 15 20 20 C 1.38449 * 119.96390 * 179.97438 * 18 17 15 21 21 C 1.38220 * 120.00132 * 0.02562 * 20 18 17 22 22 C 1.38210 * 120.03438 * 359.97146 * 21 20 18 23 23 C 1.38292 * 120.01907 * 135.17655 * 17 15 13 24 24 Cl 1.73598 * 120.00248 * 359.97438 * 23 17 15 25 25 N 1.46897 * 109.47223 * 163.88119 * 15 13 4 26 26 C 1.46893 * 111.00406 * 70.67425 * 25 15 13 27 27 C 1.46903 * 110.99946 * 194.62925 * 25 15 13 28 28 H 4.40646 * 5.51315 * 180.02562 * 4 1 2 29 29 H 1.09001 * 109.46800 * 252.06113 * 3 2 1 30 30 H 1.09002 * 109.46908 * 132.05480 * 3 2 1 31 31 H 0.96999 * 120.00037 * 180.02562 * 8 7 5 32 32 H 1.07997 * 120.00010 * 180.02562 * 20 18 17 33 33 H 1.08002 * 119.98343 * 179.97438 * 21 20 18 34 34 H 1.08008 * 119.97814 * 180.02562 * 22 21 20 35 35 H 1.09005 * 109.47263 * 61.25495 * 26 25 15 36 36 H 1.09001 * 109.47330 * 181.25672 * 26 25 15 37 37 H 1.08998 * 109.47351 * 301.25838 * 26 25 15 38 38 H 1.08998 * 109.47167 * 59.99918 * 27 25 15 39 39 H 1.08997 * 109.47023 * 179.97438 * 27 25 15 40 40 H 1.08995 * 109.47388 * 299.99896 * 27 25 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1350 -1.3499 -0.2885 5 6 3.2723 -1.7662 -1.5875 6 1 3.0858 -2.7980 -1.8466 7 6 3.6516 -0.8607 -2.5709 8 7 4.3261 0.2189 -2.2451 9 14 3.2026 -1.1781 -4.3561 10 1 1.9423 -0.4644 -4.6840 11 1 4.2931 -0.6863 -5.2359 12 1 3.0153 -2.6360 -4.5678 13 6 3.4497 -2.1831 0.7230 14 8 3.9325 -3.2701 0.4855 15 6 3.2015 -1.7642 2.1491 16 1 2.2188 -1.2989 2.2255 17 6 4.2587 -0.7778 2.5741 18 6 5.5883 -1.0122 2.2670 19 9 5.9388 -2.1256 1.5867 20 6 6.5585 -0.1050 2.6575 21 6 6.1997 1.0337 3.3540 22 6 4.8724 1.2677 3.6605 23 6 3.9007 0.3649 3.2660 24 17 2.2331 0.6637 3.6447 25 7 3.2538 -2.9444 3.0223 26 6 4.6278 -3.4495 3.1431 27 6 2.6840 -2.6474 4.3434 28 1 -1.0498 -0.0003 -0.0002 29 1 3.0092 0.3174 0.9777 30 1 3.0090 0.6892 -0.7631 31 1 4.5905 0.8512 -2.9315 32 1 7.5957 -0.2870 2.4179 33 1 6.9568 1.7410 3.6588 34 1 4.5930 2.1580 4.2044 35 1 5.2599 -2.6806 3.5874 36 1 4.6345 -4.3363 3.7768 37 1 5.0087 -3.7064 2.1547 38 1 1.6438 -2.3422 4.2301 39 1 2.7348 -3.5382 4.9695 40 1 3.2502 -1.8417 4.8105 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000490984286.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 21:20:36 Heat of formation + Delta-G solvation = 42.741025 kcal Electronic energy + Delta-G solvation = -29023.564036 eV Core-core repulsion = 24975.349317 eV Total energy + Delta-G solvation = -4048.214720 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 338.094 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -48.71093 -40.04543 -38.28417 -36.50217 -36.46649 -34.89841 -32.51116 -31.70616 -31.00559 -30.37938 -27.59693 -27.22904 -26.45382 -24.49689 -22.93090 -22.70335 -21.29386 -18.95393 -18.05713 -17.65790 -17.05702 -16.57036 -16.17648 -15.93930 -15.45736 -14.89556 -14.77584 -14.52307 -14.38837 -14.03994 -13.86384 -13.56586 -13.41030 -13.09003 -12.82151 -12.47912 -12.18980 -12.02468 -11.93687 -11.74891 -11.53591 -11.48619 -11.35515 -11.23596 -11.01539 -10.77691 -10.64215 -10.51427 -10.31236 -9.69356 -9.46615 -9.08521 -8.89897 -8.62033 -8.30229 -7.85712 -7.59418 -6.36084 -3.96448 0.99189 1.11201 2.02372 3.17531 3.27454 3.31446 3.40890 3.45233 3.59757 3.77948 4.08238 4.34342 4.39999 4.67490 4.78285 4.85810 4.94610 5.09271 5.20495 5.31953 5.43354 5.50426 5.60819 5.66350 5.83099 5.90587 5.92345 5.96201 6.02767 6.06735 6.13280 6.18071 6.22467 6.67927 6.69973 6.80475 6.97052 7.24046 7.42065 7.59151 8.18733 8.37191 8.46918 9.16311 9.34631 9.95662 10.67858 Molecular weight = 338.09amu Principal moments of inertia in cm(-1) A = 0.012112 B = 0.005775 C = 0.005455 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2311.108628 B = 4847.728996 C = 5131.297051 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.246 4.246 2 C -0.159 4.159 3 C 0.189 3.811 4 N -0.435 5.435 5 C -0.303 4.303 6 H 0.095 0.905 7 C 0.038 3.962 8 N -0.867 5.867 9 Si 0.916 3.084 10 H -0.278 1.278 11 H -0.284 1.284 12 H -0.267 1.267 13 C 0.476 3.524 14 O -0.543 6.543 15 C 0.103 3.897 16 H 0.110 0.890 17 C -0.138 4.138 18 C 0.146 3.854 19 F -0.105 7.105 20 C -0.154 4.154 21 C -0.077 4.077 22 C -0.129 4.129 23 C -0.003 4.003 24 Cl -0.054 7.054 25 N -0.507 5.507 26 C 0.001 3.999 27 C 0.021 3.979 28 H 0.208 0.792 29 H 0.074 0.926 30 H 0.135 0.865 31 H 0.269 0.731 32 H 0.141 0.859 33 H 0.141 0.859 34 H 0.139 0.861 35 H 0.015 0.985 36 H 0.056 0.944 37 H 0.118 0.882 38 H 0.066 0.934 39 H 0.067 0.933 40 H 0.024 0.976 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.691 5.171 13.398 14.378 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.265 4.265 2 C -0.161 4.161 3 C 0.065 3.935 4 N -0.154 5.154 5 C -0.430 4.430 6 H 0.113 0.887 7 C -0.166 4.166 8 N -0.505 5.505 9 Si 0.743 3.257 10 H -0.204 1.204 11 H -0.210 1.210 12 H -0.192 1.192 13 C 0.263 3.737 14 O -0.423 6.423 15 C -0.009 4.009 16 H 0.128 0.872 17 C -0.142 4.142 18 C 0.125 3.875 19 F -0.082 7.082 20 C -0.173 4.173 21 C -0.096 4.096 22 C -0.147 4.147 23 C -0.030 4.030 24 Cl -0.025 7.025 25 N -0.228 5.228 26 C -0.146 4.146 27 C -0.127 4.127 28 H 0.225 0.775 29 H 0.092 0.908 30 H 0.152 0.848 31 H 0.079 0.921 32 H 0.159 0.841 33 H 0.158 0.842 34 H 0.156 0.844 35 H 0.033 0.967 36 H 0.075 0.925 37 H 0.136 0.864 38 H 0.085 0.915 39 H 0.086 0.914 40 H 0.042 0.958 Dipole moment (debyes) X Y Z Total from point charges 0.618 4.324 12.950 13.667 hybrid contribution -0.127 0.684 -0.521 0.869 sum 0.490 5.008 12.429 13.409 Atomic orbital electron populations 1.24603 0.95599 1.02142 1.04130 1.24239 0.95320 0.98755 0.97753 1.18872 0.82279 0.89514 1.02818 1.43313 1.55752 1.11061 1.05302 1.19462 1.44977 0.97354 0.81229 0.88726 1.25302 0.94526 0.96522 1.00284 1.69869 1.32803 1.13072 1.34749 0.86064 0.78213 0.79203 0.82244 1.20356 1.20957 1.19169 1.19734 0.82102 0.87044 0.84833 1.90467 1.45658 1.22563 1.83582 1.20847 0.97322 0.88217 0.94563 0.87238 1.20253 0.95033 0.97225 1.01669 1.17319 0.91956 0.84866 0.93345 1.91651 1.92142 1.47856 1.76599 1.21269 0.99941 0.94876 1.01182 1.20903 0.95620 0.96322 0.96747 1.21006 0.92012 0.99496 1.02233 1.20553 0.86243 0.95568 1.00652 1.98373 1.16143 1.95346 1.92665 1.62046 1.21571 1.28059 1.11120 1.23243 0.87775 0.98035 1.05535 1.22480 0.99823 1.00109 0.90298 0.77504 0.90850 0.84778 0.92123 0.84086 0.84168 0.84359 0.96677 0.92521 0.86380 0.91525 0.91380 0.95792 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.25 -4.59 19.25 29.55 0.57 -4.02 16 2 C -0.16 -3.42 13.29 -37.12 -0.49 -3.91 16 3 C 0.19 4.35 5.16 -6.82 -0.04 4.31 16 4 N -0.43 -11.26 2.51 -117.93 -0.30 -11.56 16 5 C -0.30 -8.49 8.89 -14.93 -0.13 -8.63 16 6 H 0.10 2.79 7.77 -52.49 -0.41 2.38 16 7 C 0.04 1.00 4.95 -17.47 -0.09 0.92 16 8 N -0.87 -23.11 11.36 55.50 0.63 -22.48 16 9 Si 0.92 20.90 29.62 -169.99 -5.03 15.87 16 10 H -0.28 -6.24 7.11 56.52 0.40 -5.84 16 11 H -0.28 -6.36 7.11 56.52 0.40 -5.96 16 12 H -0.27 -6.13 7.11 56.52 0.40 -5.72 16 13 C 0.48 11.90 5.43 -10.99 -0.06 11.84 16 14 O -0.54 -15.06 13.19 5.55 0.07 -14.98 16 15 C 0.10 2.07 1.45 -70.02 -0.10 1.97 16 16 H 0.11 2.18 5.32 -51.93 -0.28 1.90 16 17 C -0.14 -2.47 2.50 -104.52 -0.26 -2.73 16 18 C 0.15 2.65 5.08 -39.42 -0.20 2.45 16 19 F -0.10 -2.22 11.36 2.25 0.03 -2.20 16 20 C -0.15 -2.19 10.03 -39.51 -0.40 -2.59 16 21 C -0.08 -0.90 10.04 -39.60 -0.40 -1.30 16 22 C -0.13 -1.58 9.83 -39.54 -0.39 -1.97 16 23 C 0.00 -0.04 4.96 -39.51 -0.20 -0.23 16 24 Cl -0.05 -0.76 26.46 -51.86 -1.37 -2.13 16 25 N -0.51 -9.56 4.75 -246.01 -1.17 -10.73 16 26 C 0.00 0.02 7.57 60.06 0.45 0.48 16 27 C 0.02 0.32 9.20 60.07 0.55 0.87 16 28 H 0.21 2.94 7.80 -54.10 -0.42 2.52 16 29 H 0.07 1.55 4.12 -51.93 -0.21 1.33 16 30 H 0.14 3.37 5.39 -51.93 -0.28 3.09 16 31 H 0.27 6.73 8.31 -40.82 -0.34 6.39 16 32 H 0.14 1.70 8.06 -52.49 -0.42 1.28 16 33 H 0.14 1.12 8.06 -52.49 -0.42 0.69 16 34 H 0.14 1.31 8.06 -52.48 -0.42 0.89 16 35 H 0.01 0.26 5.44 -51.93 -0.28 -0.02 16 36 H 0.06 0.90 8.13 -51.93 -0.42 0.48 16 37 H 0.12 2.55 4.16 -51.93 -0.22 2.33 16 38 H 0.07 0.94 8.09 -51.93 -0.42 0.52 16 39 H 0.07 0.88 8.13 -51.93 -0.42 0.46 16 40 H 0.02 0.34 7.21 -51.93 -0.37 -0.04 16 LS Contribution 342.28 15.07 5.16 5.16 Total: -1.00 -31.61 342.28 -7.30 -38.91 By element: Atomic # 1 Polarization: 10.82 SS G_CDS: -4.14 Total: 6.68 kcal Atomic # 6 Polarization: -1.36 SS G_CDS: -1.17 Total: -2.53 kcal Atomic # 7 Polarization: -43.94 SS G_CDS: -0.83 Total: -44.77 kcal Atomic # 8 Polarization: -15.06 SS G_CDS: 0.07 Total: -14.98 kcal Atomic # 9 Polarization: -2.22 SS G_CDS: 0.03 Total: -2.20 kcal Atomic # 14 Polarization: 20.90 SS G_CDS: -5.03 Total: 15.87 kcal Atomic # 17 Polarization: -0.76 SS G_CDS: -1.37 Total: -2.13 kcal Total LS contribution 5.16 Total: 5.16 kcal Total: -31.61 -7.30 -38.91 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000490984286.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 81.653 kcal (2) G-P(sol) polarization free energy of solvation -31.613 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.040 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.299 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.912 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.741 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds