Wall clock time and date at job start Tue Mar 31 2020 20:17:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42907 * 114.00041 * 2 1 4 4 C 1.52996 * 109.46823 * 179.97438 * 3 2 1 5 5 N 1.46502 * 109.47169 * 65.00175 * 4 3 2 6 6 C 1.36940 * 119.99586 * 269.99513 * 5 4 3 7 7 H 1.08001 * 119.99697 * 145.95085 * 6 5 4 8 8 C 1.38810 * 120.00257 * 325.94565 * 6 5 4 9 9 N 1.31620 * 119.99886 * 337.07215 * 8 6 5 10 10 Si 1.86796 * 119.99737 * 157.06962 * 8 6 5 11 11 H 1.48501 * 109.47320 * 90.00662 * 10 8 6 12 12 H 1.48510 * 109.47141 * 209.99987 * 10 8 6 13 13 H 1.48497 * 109.47428 * 330.00130 * 10 8 6 14 14 C 1.46496 * 120.00068 * 89.99430 * 5 4 3 15 15 N 1.46507 * 109.46956 * 90.46406 * 14 5 4 16 16 N 1.39741 * 119.95828 * 75.24836 * 15 14 5 17 17 N 1.28352 * 122.94243 * 180.02562 * 16 15 14 18 18 C 1.35600 * 121.97567 * 359.97438 * 17 16 15 19 19 C 1.39855 * 121.33385 * 180.02562 * 18 17 16 20 20 Cl 1.73598 * 120.14268 * 359.95525 * 19 18 17 21 21 C 1.37759 * 119.71111 * 179.97438 * 19 18 17 22 22 C 1.38856 * 120.79334 * 359.97438 * 21 19 18 23 23 C 1.37762 * 120.55184 * 359.73612 * 22 21 19 24 24 C 1.39374 * 119.59744 * 0.53551 * 23 22 21 25 25 C 1.35402 * 119.95605 * 255.28906 * 15 14 5 26 26 O 1.21737 * 121.31938 * 359.97438 * 25 15 14 27 27 H 1.08999 * 109.47337 * 180.02562 * 1 2 3 28 28 H 1.09008 * 109.47153 * 300.00329 * 1 2 3 29 29 H 1.08996 * 109.46808 * 60.00047 * 1 2 3 30 30 H 1.09000 * 109.47048 * 59.99857 * 3 2 1 31 31 H 1.08991 * 109.46514 * 299.99743 * 3 2 1 32 32 H 1.08994 * 109.47526 * 304.99833 * 4 3 2 33 33 H 1.09000 * 109.46697 * 184.99597 * 4 3 2 34 34 H 0.96997 * 119.99575 * 185.04300 * 9 8 6 35 35 H 1.08999 * 109.47252 * 330.46482 * 14 5 4 36 36 H 1.09002 * 109.47243 * 210.46087 * 14 5 4 37 37 H 1.08000 * 119.60271 * 179.97438 * 21 19 18 38 38 H 1.07992 * 119.72213 * 180.02562 * 22 21 19 39 39 H 1.08004 * 120.19701 * 179.97438 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5354 1.1846 0.0006 5 7 3.9766 0.5639 -1.2509 6 6 4.0978 -0.7975 -1.3344 7 1 3.8775 -1.3033 -2.2629 8 6 4.5038 -1.5275 -0.2257 9 7 5.1899 -0.9418 0.7326 10 14 4.0762 -3.3411 -0.0940 11 1 5.1566 -4.1506 -0.7126 12 1 3.9358 -3.7140 1.3366 13 1 2.7965 -3.6007 -0.8011 14 6 4.2882 1.3997 -2.4130 15 7 5.7080 1.7604 -2.3885 16 7 6.6746 0.8135 -2.7372 17 7 7.9328 1.0672 -2.7352 18 6 8.4192 2.2854 -2.3914 19 6 9.7930 2.5473 -2.3944 20 17 10.9168 1.3024 -2.8428 21 6 10.2506 3.7973 -2.0397 22 6 9.3636 4.8030 -1.6790 23 6 8.0058 4.5706 -1.6742 24 6 7.5216 3.3114 -2.0241 25 6 6.0818 3.0107 -2.0273 26 8 5.2587 3.8530 -1.7190 27 1 -0.3634 -1.0276 0.0005 28 1 -0.3634 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 1.6886 1.8464 0.8900 31 1 1.6886 1.8463 -0.8900 32 1 3.8508 0.5685 0.8426 33 1 3.9784 2.1765 0.0901 34 1 5.5365 -1.4665 1.4712 35 1 3.6826 2.3055 -2.3820 36 1 4.0694 0.8475 -3.3269 37 1 11.3118 3.9975 -2.0423 38 1 9.7412 5.7767 -1.4043 39 1 7.3211 5.3568 -1.3922 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000819885657.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:17:59 Heat of formation + Delta-G solvation = 40.668110 kcal Electronic energy + Delta-G solvation = -27345.383102 eV Core-core repulsion = 23316.998455 eV Total energy + Delta-G solvation = -4028.384646 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 338.093 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -40.80396 -38.43499 -37.33510 -37.20575 -36.34190 -35.57393 -33.29077 -31.46136 -31.06957 -30.57161 -28.97856 -26.39946 -25.78132 -24.90954 -24.10881 -22.94798 -22.02340 -20.68132 -19.24583 -18.58883 -17.16122 -16.66591 -16.01684 -15.79220 -15.48092 -15.22323 -15.08410 -14.94910 -14.60364 -14.36752 -14.11914 -13.88389 -13.52234 -13.31991 -12.60731 -12.49441 -12.33816 -12.13042 -11.88651 -11.70515 -11.47255 -11.32569 -11.02752 -10.96413 -10.91680 -10.82344 -10.56777 -10.21989 -10.13886 -9.94270 -9.66665 -9.58218 -9.05110 -8.94179 -8.72633 -8.04428 -7.04471 -6.05135 -3.48884 0.27034 0.68585 2.11244 2.18991 2.60544 2.82773 3.35292 3.40557 3.46009 3.90687 4.11528 4.21035 4.34876 4.56733 4.68023 4.85728 5.02995 5.10554 5.23567 5.37440 5.44722 5.66497 5.68004 5.73817 5.84651 5.97710 6.01020 6.04480 6.08272 6.11962 6.13913 6.30394 6.45828 6.53871 6.60885 6.79409 7.43737 7.64305 7.90940 8.04968 8.25415 8.83218 8.93843 9.48302 9.97077 10.96607 Molecular weight = 338.09amu Principal moments of inertia in cm(-1) A = 0.014146 B = 0.004040 C = 0.003365 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1978.921366 B = 6928.330032 C = 8319.457149 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.356 6.356 3 C 0.053 3.947 4 C 0.128 3.872 5 N -0.534 5.534 6 C -0.240 4.240 7 H 0.076 0.924 8 C 0.029 3.971 9 N -0.873 5.873 10 Si 0.913 3.087 11 H -0.284 1.284 12 H -0.289 1.289 13 H -0.272 1.272 14 C 0.327 3.673 15 N -0.433 5.433 16 N 0.124 4.876 17 N -0.250 5.250 18 C 0.095 3.905 19 C -0.013 4.013 20 Cl -0.043 7.043 21 C -0.079 4.079 22 C -0.121 4.121 23 C -0.043 4.043 24 C -0.162 4.162 25 C 0.521 3.479 26 O -0.526 6.526 27 H 0.076 0.924 28 H 0.027 0.973 29 H 0.030 0.970 30 H 0.032 0.968 31 H 0.032 0.968 32 H 0.113 0.887 33 H 0.048 0.952 34 H 0.262 0.738 35 H 0.089 0.911 36 H 0.087 0.913 37 H 0.143 0.857 38 H 0.141 0.859 39 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.289 9.443 -4.169 11.178 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.274 6.274 3 C -0.026 4.026 4 C 0.003 3.997 5 N -0.250 5.250 6 C -0.372 4.372 7 H 0.094 0.906 8 C -0.175 4.175 9 N -0.513 5.513 10 Si 0.741 3.259 11 H -0.211 1.211 12 H -0.214 1.214 13 H -0.197 1.197 14 C 0.121 3.879 15 N -0.265 5.265 16 N 0.138 4.862 17 N -0.138 5.138 18 C -0.018 4.018 19 C -0.045 4.045 20 Cl -0.014 7.014 21 C -0.099 4.099 22 C -0.142 4.142 23 C -0.063 4.063 24 C -0.174 4.174 25 C 0.311 3.689 26 O -0.401 6.401 27 H 0.094 0.906 28 H 0.046 0.954 29 H 0.049 0.951 30 H 0.050 0.950 31 H 0.050 0.950 32 H 0.130 0.870 33 H 0.067 0.933 34 H 0.072 0.928 35 H 0.107 0.893 36 H 0.105 0.895 37 H 0.160 0.840 38 H 0.159 0.841 39 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges 3.934 8.431 -4.172 10.196 hybrid contribution -0.181 0.444 0.711 0.858 sum 3.753 8.875 -3.461 10.239 Atomic orbital electron populations 1.22641 0.83900 1.01621 0.98569 1.88203 1.16858 1.27452 1.94889 1.23211 0.97491 0.84334 0.97562 1.21341 0.88539 0.97515 0.92342 1.44935 1.67247 1.03467 1.09360 1.19172 1.39353 0.80333 0.98297 0.90606 1.25199 0.95812 0.98972 0.97481 1.69852 1.32766 1.36050 1.12627 0.86135 0.78801 0.83755 0.77170 1.21080 1.21442 1.19720 1.22610 0.76129 0.95314 0.93844 1.54915 1.10722 1.07742 1.53159 1.80381 0.93113 1.13749 0.98930 1.74183 1.05469 1.16273 1.17899 1.19409 0.93160 0.90833 0.98418 1.20520 0.88490 0.91339 1.04149 1.98377 1.59467 1.52795 1.90723 1.21149 1.01057 0.90678 0.97055 1.21132 0.92429 0.99503 1.01099 1.21118 0.95818 0.95166 0.94167 1.20682 0.93935 0.96050 1.06698 1.18967 0.88242 0.83682 0.78042 1.90790 1.53758 1.47089 1.48448 0.90591 0.95442 0.95111 0.95031 0.95019 0.86952 0.93341 0.92798 0.89293 0.89525 0.83961 0.84129 0.83844 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 24. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.47 11.01 101.05 1.11 1.58 16 2 O -0.36 -7.40 10.18 -35.23 -0.36 -7.76 16 3 C 0.05 1.03 6.28 37.16 0.23 1.26 16 4 C 0.13 2.91 5.72 -4.04 -0.02 2.89 16 5 N -0.53 -12.38 2.67 -176.95 -0.47 -12.85 16 6 C -0.24 -6.06 8.99 -15.06 -0.14 -6.20 16 7 H 0.08 1.90 7.93 -52.49 -0.42 1.48 16 8 C 0.03 0.75 4.95 -17.43 -0.09 0.67 16 9 N -0.87 -23.98 11.31 55.49 0.63 -23.35 16 10 Si 0.91 21.21 29.61 -169.99 -5.03 16.18 16 11 H -0.28 -6.62 7.11 56.52 0.40 -6.22 16 12 H -0.29 -6.79 7.11 56.52 0.40 -6.39 16 13 H -0.27 -6.24 7.11 56.52 0.40 -5.84 16 14 C 0.33 6.68 6.47 -63.75 -0.41 6.27 16 15 N -0.43 -9.14 3.76 -64.50 -0.24 -9.38 16 16 N 0.12 2.70 12.77 60.35 0.77 3.47 16 17 N -0.25 -5.11 11.09 32.29 0.36 -4.75 16 18 C 0.10 1.73 6.71 -84.48 -0.57 1.16 16 19 C -0.01 -0.20 6.35 -39.15 -0.25 -0.44 16 20 Cl -0.04 -0.61 28.53 -51.86 -1.48 -2.09 16 21 C -0.08 -0.91 9.79 -39.53 -0.39 -1.29 16 22 C -0.12 -1.31 10.02 -39.53 -0.40 -1.71 16 23 C -0.04 -0.61 9.67 -39.33 -0.38 -0.99 16 24 C -0.16 -2.91 5.90 -104.77 -0.62 -3.53 16 25 C 0.52 10.64 7.76 -12.39 -0.10 10.55 16 26 O -0.53 -11.18 16.14 5.16 0.08 -11.09 16 27 H 0.08 1.09 8.14 -51.93 -0.42 0.67 16 28 H 0.03 0.38 8.14 -51.92 -0.42 -0.04 16 29 H 0.03 0.43 8.14 -51.93 -0.42 0.01 16 30 H 0.03 0.56 8.14 -51.93 -0.42 0.13 16 31 H 0.03 0.58 8.14 -51.93 -0.42 0.16 16 32 H 0.11 2.93 5.32 -51.93 -0.28 2.65 16 33 H 0.05 1.10 8.07 -51.93 -0.42 0.68 16 34 H 0.26 7.02 8.32 -40.82 -0.34 6.68 16 35 H 0.09 1.71 7.04 -51.93 -0.37 1.35 16 36 H 0.09 1.64 8.04 -51.93 -0.42 1.22 16 37 H 0.14 1.16 8.06 -52.49 -0.42 0.74 16 38 H 0.14 1.00 8.06 -52.49 -0.42 0.58 16 39 H 0.14 1.84 7.81 -52.48 -0.41 1.43 16 LS Contribution 356.36 15.07 5.37 5.37 Total: -1.00 -29.97 356.36 -6.78 -36.76 By element: Atomic # 1 Polarization: 3.69 SS G_CDS: -4.40 Total: -0.71 kcal Atomic # 6 Polarization: 12.22 SS G_CDS: -2.00 Total: 10.21 kcal Atomic # 7 Polarization: -47.91 SS G_CDS: 1.04 Total: -46.87 kcal Atomic # 8 Polarization: -18.58 SS G_CDS: -0.28 Total: -18.85 kcal Atomic # 14 Polarization: 21.21 SS G_CDS: -5.03 Total: 16.18 kcal Atomic # 17 Polarization: -0.61 SS G_CDS: -1.48 Total: -2.09 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -29.97 -6.78 -36.76 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000819885657.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 77.423 kcal (2) G-P(sol) polarization free energy of solvation -29.974 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 47.449 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.781 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.755 kcal (6) G-S(sol) free energy of system = (1) + (5) 40.668 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds