Wall clock time and date at job start Tue Mar 31 2020 21:18:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53002 * 109.47136 * 2 1 4 4 C 1.53005 * 109.47011 * 119.99645 * 2 1 3 5 5 H 1.08999 * 109.47164 * 58.63987 * 4 2 1 6 6 N 1.46496 * 109.47109 * 178.64313 * 4 2 1 7 7 C 1.34775 * 119.99971 * 275.00139 * 6 4 2 8 8 O 1.21565 * 120.00047 * 359.97438 * 7 6 4 9 9 C 1.47770 * 120.00134 * 180.02562 * 7 6 4 10 10 C 1.39626 * 120.15566 * 359.97438 * 9 7 6 11 11 C 1.37894 * 119.86568 * 180.30002 * 10 9 7 12 12 C 1.38427 * 120.18080 * 359.43103 * 11 10 9 13 13 C 1.38268 * 120.31683 * 0.60036 * 12 11 10 14 14 C 1.38154 * 120.12855 * 359.67445 * 13 12 11 15 15 Cl 1.73602 * 120.08961 * 180.02562 * 14 13 12 16 16 C 1.50703 * 109.46824 * 298.64295 * 4 2 1 17 17 O 1.21294 * 120.00091 * 266.34247 * 16 4 2 18 18 N 1.34780 * 120.00201 * 86.35026 * 16 4 2 19 19 C 1.46503 * 119.99799 * 4.48294 * 18 16 4 20 20 C 1.37096 * 119.99902 * 184.48660 * 18 16 4 21 21 H 1.07997 * 120.00160 * 353.37404 * 20 18 16 22 22 C 1.38947 * 120.00101 * 173.38269 * 20 18 16 23 23 N 1.31415 * 119.99860 * 7.34720 * 22 20 18 24 24 Si 1.86799 * 120.00461 * 187.35216 * 22 20 18 25 25 H 1.48505 * 109.46666 * 359.97438 * 24 22 20 26 26 H 1.48499 * 109.47126 * 119.99310 * 24 22 20 27 27 H 1.48493 * 109.47192 * 239.99874 * 24 22 20 28 28 H 1.09003 * 109.47458 * 187.16742 * 1 2 3 29 29 H 1.08999 * 109.47605 * 307.17126 * 1 2 3 30 30 H 1.09004 * 109.47333 * 67.17111 * 1 2 3 31 31 H 1.08992 * 109.47359 * 239.99344 * 2 1 3 32 32 H 1.09000 * 109.47105 * 179.97438 * 3 2 1 33 33 H 1.09000 * 109.46688 * 299.99633 * 3 2 1 34 34 H 1.09006 * 109.46997 * 59.99407 * 3 2 1 35 35 H 0.97000 * 120.00088 * 95.00050 * 6 4 2 36 36 H 1.07996 * 120.06466 * 0.03190 * 10 9 7 37 37 H 1.07999 * 119.90708 * 179.72524 * 11 10 9 38 38 H 1.08003 * 119.83716 * 180.31663 * 12 11 10 39 39 H 1.07996 * 119.93215 * 179.70083 * 13 12 11 40 40 H 1.09002 * 109.47111 * 359.50683 * 19 18 16 41 41 H 1.08994 * 109.46604 * 119.50582 * 19 18 16 42 42 H 1.08995 * 109.46828 * 239.50849 * 19 18 16 43 43 H 0.96997 * 120.00070 * 180.02562 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 1.2493 5 1 1.6569 -1.7416 1.2617 6 7 3.5046 -0.7496 1.2331 7 6 4.1523 -1.7238 0.5639 8 8 3.5212 -2.5792 -0.0258 9 6 5.6296 -1.7528 0.5480 10 6 6.3578 -0.7723 1.2247 11 6 7.7362 -0.8015 1.2008 12 6 8.3992 -1.8066 0.5178 13 6 7.6857 -2.7811 -0.1554 14 6 6.3043 -2.7610 -0.1447 15 17 5.4095 -3.9854 -0.9897 16 6 1.5652 0.0085 2.4795 17 8 2.2727 0.8457 2.9989 18 7 0.3546 -0.2692 3.0027 19 6 -0.4585 -1.3479 2.4354 20 6 -0.1160 0.4577 4.0655 21 1 0.5237 1.1793 4.5518 22 6 -1.4159 0.2659 4.5173 23 7 -2.1460 -0.7089 4.0237 24 14 -2.1259 1.3938 5.8262 25 1 -1.1084 2.4036 6.2142 26 1 -3.3268 2.0820 5.2882 27 1 -2.5064 0.5923 7.0169 28 1 -0.3634 -1.0196 0.1282 29 1 -0.3634 0.6209 0.8188 30 1 -0.3634 0.3987 -0.9472 31 1 1.8933 -0.5139 -0.8898 32 1 3.1300 1.4425 0.0005 33 1 1.6767 1.9563 -0.8900 34 1 1.6765 1.9564 0.8900 35 1 4.0081 -0.0673 1.7040 36 1 5.8424 0.0099 1.7622 37 1 8.3000 -0.0409 1.7202 38 1 9.4789 -1.8271 0.5069 39 1 8.2093 -3.5596 -0.6903 40 1 0.0727 -1.8019 1.5989 41 1 -0.6454 -2.1022 3.1997 42 1 -1.4077 -0.9419 2.0858 43 1 -3.0535 -0.8426 4.3388 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000299542535.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 21:18:24 Heat of formation + Delta-G solvation = -24.677597 kcal Electronic energy + Delta-G solvation = -27791.236960 eV Core-core repulsion = 23863.559054 eV Total energy + Delta-G solvation = -3927.677905 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 338.118 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -40.41230 -39.28649 -37.98890 -36.39513 -35.48222 -34.81688 -33.19407 -31.57161 -31.29265 -30.89074 -27.51590 -26.78518 -25.83010 -24.37650 -23.56441 -22.66581 -21.07105 -20.27808 -18.69610 -18.02396 -16.93722 -16.67789 -16.04017 -15.81882 -15.41576 -15.15632 -14.89999 -14.57060 -14.33032 -14.20183 -13.92224 -13.50914 -13.40896 -13.20605 -12.80839 -12.44216 -12.11036 -12.03752 -11.74147 -11.73103 -11.61469 -11.55814 -11.31621 -11.09698 -11.09014 -10.91998 -10.74402 -10.45188 -10.39889 -10.36485 -10.02104 -9.38519 -9.32000 -9.05719 -8.96515 -8.74864 -8.32863 -7.92840 -6.30442 -3.87239 0.58233 0.94619 2.10966 2.85774 3.08659 3.20989 3.25408 3.30219 3.65151 3.81497 4.07652 4.48563 4.56965 4.71507 4.78421 5.00651 5.07076 5.08770 5.27393 5.34780 5.43886 5.49920 5.53069 5.74613 5.86228 5.90639 5.98612 6.08429 6.10396 6.14114 6.28623 6.32014 6.43401 6.45816 6.50971 6.71479 6.76621 6.89400 7.07634 7.38547 7.51087 7.78286 7.98893 8.39242 8.44319 9.10230 9.36434 9.87066 10.62800 Molecular weight = 338.12amu Principal moments of inertia in cm(-1) A = 0.018162 B = 0.003149 C = 0.002992 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1541.289142 B = 8890.052840 C = 9355.126931 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C -0.092 4.092 3 C -0.143 4.143 4 C 0.137 3.863 5 H 0.101 0.899 6 N -0.698 5.698 7 C 0.549 3.451 8 O -0.521 6.521 9 C -0.123 4.123 10 C -0.073 4.073 11 C -0.125 4.125 12 C -0.087 4.087 13 C -0.125 4.125 14 C 0.013 3.987 15 Cl -0.032 7.032 16 C 0.436 3.564 17 O -0.597 6.597 18 N -0.434 5.434 19 C 0.104 3.896 20 C -0.301 4.301 21 H 0.106 0.894 22 C 0.029 3.971 23 N -0.882 5.882 24 Si 0.930 3.070 25 H -0.268 1.268 26 H -0.280 1.280 27 H -0.281 1.281 28 H 0.065 0.935 29 H 0.071 0.929 30 H 0.050 0.950 31 H 0.073 0.927 32 H 0.048 0.952 33 H 0.047 0.953 34 H 0.068 0.932 35 H 0.405 0.595 36 H 0.139 0.861 37 H 0.135 0.865 38 H 0.134 0.866 39 H 0.137 0.863 40 H 0.032 0.968 41 H 0.062 0.938 42 H 0.081 0.919 43 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 15.338 -2.343 -8.835 17.855 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.214 4.214 2 C -0.112 4.112 3 C -0.200 4.200 4 C 0.029 3.971 5 H 0.119 0.881 6 N -0.350 5.350 7 C 0.335 3.665 8 O -0.398 6.398 9 C -0.127 4.127 10 C -0.092 4.092 11 C -0.143 4.143 12 C -0.106 4.106 13 C -0.143 4.143 14 C -0.015 4.015 15 Cl -0.003 7.003 16 C 0.223 3.777 17 O -0.484 6.484 18 N -0.151 5.151 19 C -0.039 4.039 20 C -0.429 4.429 21 H 0.124 0.876 22 C -0.174 4.174 23 N -0.523 5.523 24 Si 0.757 3.243 25 H -0.192 1.192 26 H -0.206 1.206 27 H -0.207 1.207 28 H 0.084 0.916 29 H 0.090 0.910 30 H 0.069 0.931 31 H 0.091 0.909 32 H 0.067 0.933 33 H 0.066 0.934 34 H 0.087 0.913 35 H 0.243 0.757 36 H 0.156 0.844 37 H 0.153 0.847 38 H 0.152 0.848 39 H 0.155 0.845 40 H 0.050 0.950 41 H 0.081 0.919 42 H 0.099 0.901 43 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges 14.869 -2.740 -9.006 17.598 hybrid contribution -0.353 0.586 0.825 1.072 sum 14.516 -2.155 -8.181 16.801 Atomic orbital electron populations 1.22180 0.94108 1.02990 1.02133 1.21319 0.96566 0.96658 0.96701 1.21806 1.00483 0.95725 1.02013 1.20929 0.79642 1.01407 0.95123 0.88113 1.45705 1.07168 1.29461 1.52696 1.18041 0.86655 0.81921 0.79870 1.90849 1.67952 1.37499 1.43451 1.19892 0.94148 0.96995 1.01617 1.21455 0.94486 0.96956 0.96320 1.21216 0.94105 0.99143 0.99822 1.21305 1.00365 0.93461 0.95441 1.21067 0.91485 1.00483 1.01301 1.21063 0.92222 0.91912 0.96351 1.98419 1.75123 1.51782 1.74946 1.19561 0.83797 0.87410 0.86892 1.90477 1.55793 1.37967 1.64132 1.43664 1.14252 1.29309 1.27850 1.22202 0.94964 0.90316 0.96436 1.19854 0.96645 1.18390 1.08031 0.87635 1.25338 0.96187 0.97015 0.98831 1.70182 1.10208 1.28986 1.42907 0.85794 0.78936 0.79847 0.79758 1.19225 1.20579 1.20734 0.91645 0.90972 0.93118 0.90864 0.93267 0.93386 0.91331 0.75686 0.84358 0.84738 0.84774 0.84466 0.95011 0.91891 0.90053 0.92292 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.69 7.43 37.16 0.28 -2.41 16 2 C -0.09 -1.60 2.89 -90.62 -0.26 -1.86 16 3 C -0.14 -2.38 8.69 37.16 0.32 -2.06 16 4 C 0.14 2.63 1.80 -69.08 -0.12 2.50 16 5 H 0.10 2.03 5.47 -51.93 -0.28 1.74 16 6 N -0.70 -11.98 4.30 -55.90 -0.24 -12.22 16 7 C 0.55 9.20 7.73 -12.36 -0.10 9.10 16 8 O -0.52 -9.88 13.63 5.31 0.07 -9.81 16 9 C -0.12 -1.69 5.88 -104.94 -0.62 -2.31 16 10 C -0.07 -0.82 9.54 -39.19 -0.37 -1.19 16 11 C -0.12 -1.08 10.03 -39.64 -0.40 -1.48 16 12 C -0.09 -0.70 10.04 -39.50 -0.40 -1.09 16 13 C -0.12 -1.20 9.82 -39.60 -0.39 -1.59 16 14 C 0.01 0.16 6.35 -39.07 -0.25 -0.09 16 15 Cl -0.03 -0.45 26.02 -51.86 -1.35 -1.80 16 16 C 0.44 10.04 5.19 -10.98 -0.06 9.99 16 17 O -0.60 -15.01 14.89 5.54 0.08 -14.93 16 18 N -0.43 -10.69 2.45 -122.19 -0.30 -10.98 16 19 C 0.10 2.33 6.48 59.85 0.39 2.72 16 20 C -0.30 -8.08 9.56 -14.93 -0.14 -8.22 16 21 H 0.11 2.97 7.18 -52.49 -0.38 2.59 16 22 C 0.03 0.73 5.45 -17.47 -0.10 0.64 16 23 N -0.88 -22.49 9.47 55.50 0.53 -21.97 16 24 Si 0.93 20.26 29.56 -169.99 -5.02 15.23 16 25 H -0.27 -5.86 7.11 56.52 0.40 -5.46 16 26 H -0.28 -6.02 7.11 56.52 0.40 -5.62 16 27 H -0.28 -6.08 7.11 56.52 0.40 -5.68 16 28 H 0.06 1.10 5.77 -51.93 -0.30 0.80 16 29 H 0.07 1.43 6.46 -51.93 -0.34 1.10 16 30 H 0.05 0.76 8.14 -51.93 -0.42 0.33 16 31 H 0.07 1.24 8.14 -51.93 -0.42 0.82 16 32 H 0.05 0.77 7.64 -51.93 -0.40 0.37 16 33 H 0.05 0.70 8.14 -51.93 -0.42 0.28 16 34 H 0.07 1.32 6.75 -51.93 -0.35 0.97 16 35 H 0.41 6.63 5.83 -40.82 -0.24 6.39 16 36 H 0.14 1.44 6.41 -52.49 -0.34 1.11 16 37 H 0.13 0.82 8.06 -52.49 -0.42 0.40 16 38 H 0.13 0.66 8.06 -52.48 -0.42 0.24 16 39 H 0.14 1.02 8.06 -52.49 -0.42 0.59 16 40 H 0.03 0.63 3.61 -51.93 -0.19 0.44 16 41 H 0.06 1.51 7.28 -51.93 -0.38 1.14 16 42 H 0.08 1.89 6.40 -51.93 -0.33 1.56 16 43 H 0.27 6.46 8.31 -40.82 -0.34 6.12 16 LS Contribution 354.22 15.07 5.34 5.34 Total: -1.00 -29.96 354.22 -8.29 -38.26 By element: Atomic # 1 Polarization: 15.42 SS G_CDS: -5.19 Total: 10.24 kcal Atomic # 6 Polarization: 4.86 SS G_CDS: -2.21 Total: 2.65 kcal Atomic # 7 Polarization: -45.15 SS G_CDS: -0.01 Total: -45.17 kcal Atomic # 8 Polarization: -24.90 SS G_CDS: 0.15 Total: -24.74 kcal Atomic # 14 Polarization: 20.26 SS G_CDS: -5.02 Total: 15.23 kcal Atomic # 17 Polarization: -0.45 SS G_CDS: -1.35 Total: -1.80 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -29.96 -8.29 -38.26 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000299542535.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.581 kcal (2) G-P(sol) polarization free energy of solvation -29.964 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.383 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.294 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.258 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.678 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds