Wall clock time and date at job start Tue Mar 31 2020 21:18:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.53003 * 109.47552 * 2 1 4 4 C 1.53004 * 109.47308 * 120.00370 * 2 1 3 5 5 H 1.08995 * 109.46996 * 59.99646 * 4 2 1 6 6 N 1.46498 * 109.46960 * 299.99812 * 4 2 1 7 7 C 1.34775 * 119.99939 * 84.99512 * 6 4 2 8 8 O 1.21560 * 120.00053 * 0.02562 * 7 6 4 9 9 C 1.47775 * 119.99802 * 179.97438 * 7 6 4 10 10 C 1.39623 * 120.15382 * 0.02562 * 9 7 6 11 11 C 1.37898 * 119.86039 * 179.97438 * 10 9 7 12 12 C 1.38412 * 120.18846 * 0.02562 * 11 10 9 13 13 C 1.38280 * 120.31409 * 359.97438 * 12 11 10 14 14 C 1.38147 * 120.12870 * 359.73737 * 13 12 11 15 15 Cl 1.73604 * 120.09435 * 180.25640 * 14 13 12 16 16 C 1.50697 * 109.47104 * 179.97438 * 4 2 1 17 17 O 1.21296 * 119.99952 * 120.00230 * 16 4 2 18 18 N 1.34778 * 119.99986 * 300.27419 * 16 4 2 19 19 C 1.46495 * 120.00103 * 359.72356 * 18 16 4 20 20 C 1.37101 * 120.00019 * 179.72639 * 18 16 4 21 21 H 1.08000 * 120.00065 * 22.57711 * 20 18 16 22 22 C 1.38944 * 119.99882 * 202.57424 * 20 18 16 23 23 N 1.31408 * 120.00145 * 10.35285 * 22 20 18 24 24 Si 1.86804 * 119.99961 * 190.34764 * 22 20 18 25 25 H 1.48504 * 109.46991 * 60.00136 * 24 22 20 26 26 H 1.48497 * 109.47369 * 180.02562 * 24 22 20 27 27 H 1.48498 * 109.47279 * 300.00493 * 24 22 20 28 28 H 1.09004 * 109.46931 * 59.99628 * 1 2 3 29 29 H 1.08995 * 109.47381 * 179.97438 * 1 2 3 30 30 H 1.09004 * 109.46984 * 299.99788 * 1 2 3 31 31 H 1.09004 * 109.46984 * 240.00212 * 2 1 3 32 32 H 1.08993 * 109.47484 * 180.02562 * 3 2 1 33 33 H 1.08995 * 109.47056 * 300.00303 * 3 2 1 34 34 H 1.09004 * 109.46803 * 60.00101 * 3 2 1 35 35 H 0.97002 * 119.99844 * 265.00303 * 6 4 2 36 36 H 1.07994 * 120.06948 * 359.97438 * 10 9 7 37 37 H 1.08001 * 119.90524 * 180.02562 * 11 10 9 38 38 H 1.07999 * 119.84877 * 179.97438 * 12 11 10 39 39 H 1.08002 * 119.93153 * 179.97438 * 13 12 11 40 40 H 1.08998 * 109.47215 * 93.54214 * 19 18 16 41 41 H 1.08997 * 109.47539 * 213.54717 * 19 18 16 42 42 H 1.09004 * 109.47327 * 333.54969 * 19 18 16 43 43 H 0.97003 * 120.00108 * 180.02562 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0400 -0.7213 1.2492 5 1 1.6767 -1.7489 1.2492 6 7 1.5517 -0.0308 2.4454 7 6 0.3297 -0.3165 2.9368 8 8 -0.3671 -1.1476 2.3878 9 6 -0.1625 0.3797 4.1438 10 6 0.6354 1.3344 4.7772 11 6 0.1697 1.9808 5.9028 12 6 -1.0854 1.6853 6.4060 13 6 -1.8818 0.7410 5.7846 14 6 -1.4308 0.0899 4.6528 15 17 -2.4342 -1.0906 3.8696 16 6 3.5470 -0.7219 1.2488 17 8 4.1539 -0.1968 2.1584 18 7 4.2204 -1.3009 0.2351 19 6 3.4875 -1.9352 -0.8634 20 6 5.5914 -1.2965 0.2320 21 1 6.1332 -1.1761 1.1585 22 6 6.2839 -1.4470 -0.9632 23 7 5.6400 -1.3895 -2.1073 24 14 8.1301 -1.7309 -0.9436 25 1 8.4313 -2.9777 -0.1951 26 1 8.6263 -1.8578 -2.3375 27 1 8.8006 -0.5826 -0.2827 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3634 -1.0276 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 1.8933 -0.5138 -0.8900 32 1 3.1300 1.4425 -0.0005 33 1 1.6767 1.9563 -0.8899 34 1 1.6768 1.9563 0.8900 35 1 2.1079 0.6322 2.8836 36 1 1.6151 1.5662 4.3865 37 1 0.7862 2.7197 6.3932 38 1 -1.4444 2.1945 7.2881 39 1 -2.8600 0.5149 6.1828 40 1 3.3566 -1.2187 -1.6743 41 1 4.0495 -2.7958 -1.2261 42 1 2.5109 -2.2629 -0.5071 43 1 6.1234 -1.4950 -2.9417 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000299542541.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 21:18:28 Heat of formation + Delta-G solvation = -30.538085 kcal Electronic energy + Delta-G solvation = -27891.338137 eV Core-core repulsion = 23963.406102 eV Total energy + Delta-G solvation = -3927.932035 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 338.118 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -40.48940 -39.22162 -37.98699 -36.39087 -35.45091 -34.85206 -33.03029 -31.58768 -31.16573 -30.88266 -27.51268 -26.69554 -26.14871 -24.41404 -23.67707 -22.70192 -20.74652 -19.88368 -19.13095 -18.13120 -16.97327 -16.61469 -15.98546 -15.66521 -15.61966 -15.10999 -14.84162 -14.32814 -14.30451 -14.17523 -14.05045 -13.85106 -13.38279 -13.00724 -12.74917 -12.62264 -12.10674 -11.78479 -11.77148 -11.67458 -11.60891 -11.54743 -11.40055 -11.24258 -11.09116 -10.96124 -10.83933 -10.51941 -10.44974 -10.31446 -10.08154 -9.33845 -9.29292 -9.05214 -8.94559 -8.74687 -8.35236 -7.76452 -6.36340 -3.94621 0.59483 0.95446 2.11350 2.87790 3.14919 3.21403 3.23111 3.32839 3.66695 3.78504 4.10195 4.49426 4.58135 4.72615 4.79679 5.01582 5.05778 5.08820 5.28650 5.32561 5.44010 5.47331 5.54148 5.80830 5.87508 5.91698 5.99313 6.08120 6.10103 6.15676 6.26926 6.30562 6.43835 6.44471 6.47809 6.68234 6.80447 6.82143 6.84918 7.20629 7.50754 7.81314 8.03948 8.38875 8.47432 9.09678 9.33862 9.86339 10.66227 Molecular weight = 338.12amu Principal moments of inertia in cm(-1) A = 0.019901 B = 0.003150 C = 0.002936 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1406.599410 B = 8887.830101 C = 9534.487033 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C -0.112 4.112 3 C -0.141 4.141 4 C 0.142 3.858 5 H 0.098 0.902 6 N -0.693 5.693 7 C 0.550 3.450 8 O -0.517 6.517 9 C -0.122 4.122 10 C -0.073 4.073 11 C -0.125 4.125 12 C -0.088 4.088 13 C -0.125 4.125 14 C 0.012 3.988 15 Cl -0.032 7.032 16 C 0.443 3.557 17 O -0.591 6.591 18 N -0.434 5.434 19 C 0.106 3.894 20 C -0.308 4.308 21 H 0.099 0.901 22 C 0.033 3.967 23 N -0.880 5.880 24 Si 0.928 3.072 25 H -0.273 1.273 26 H -0.284 1.284 27 H -0.273 1.273 28 H 0.043 0.957 29 H 0.061 0.939 30 H 0.050 0.950 31 H 0.098 0.902 32 H 0.063 0.937 33 H 0.050 0.950 34 H 0.047 0.953 35 H 0.405 0.595 36 H 0.139 0.861 37 H 0.134 0.866 38 H 0.134 0.866 39 H 0.137 0.863 40 H 0.066 0.934 41 H 0.068 0.932 42 H 0.031 0.969 43 H 0.269 0.731 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.892 5.521 10.363 18.190 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 C -0.132 4.132 3 C -0.198 4.198 4 C 0.034 3.966 5 H 0.116 0.884 6 N -0.346 5.346 7 C 0.336 3.664 8 O -0.394 6.394 9 C -0.126 4.126 10 C -0.092 4.092 11 C -0.143 4.143 12 C -0.106 4.106 13 C -0.144 4.144 14 C -0.016 4.016 15 Cl -0.003 7.003 16 C 0.230 3.770 17 O -0.477 6.477 18 N -0.152 5.152 19 C -0.037 4.037 20 C -0.436 4.436 21 H 0.117 0.883 22 C -0.170 4.170 23 N -0.519 5.519 24 Si 0.755 3.245 25 H -0.199 1.199 26 H -0.209 1.209 27 H -0.198 1.198 28 H 0.062 0.938 29 H 0.080 0.920 30 H 0.069 0.931 31 H 0.116 0.884 32 H 0.082 0.918 33 H 0.069 0.931 34 H 0.066 0.934 35 H 0.243 0.757 36 H 0.156 0.844 37 H 0.152 0.848 38 H 0.152 0.848 39 H 0.155 0.845 40 H 0.085 0.915 41 H 0.087 0.913 42 H 0.049 0.951 43 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges -14.089 5.018 10.070 18.030 hybrid contribution 1.128 0.087 -0.053 1.133 sum -12.961 5.105 10.017 17.158 Atomic orbital electron populations 1.21850 0.94477 1.02209 1.00540 1.21739 0.96238 0.97292 0.97922 1.21747 1.01959 0.95462 1.00663 1.20766 0.93650 0.97451 0.84735 0.88381 1.45595 1.16751 1.43082 1.29191 1.17938 0.81935 0.82950 0.83555 1.90851 1.55771 1.33065 1.59748 1.19908 0.94441 1.00095 0.98185 1.21461 0.99312 0.93656 0.94789 1.21213 0.96333 1.00361 0.96387 1.21298 0.93880 0.96173 0.99267 1.21065 1.01141 0.97402 0.94777 1.21052 0.91841 0.93932 0.94730 1.98417 1.66998 1.55178 1.79695 1.19836 0.87753 0.83584 0.85839 1.90489 1.69359 1.49925 1.37938 1.43451 1.06233 1.46579 1.18906 1.21736 0.92937 0.98979 0.90078 1.19610 0.80157 1.49033 0.94820 0.88341 1.25340 1.00423 0.96606 0.94649 1.69977 1.36611 1.47821 0.97491 0.85971 0.82200 0.79188 0.77175 1.19892 1.20912 1.19788 0.93762 0.91980 0.93139 0.88443 0.91818 0.93100 0.93432 0.75727 0.84374 0.84772 0.84810 0.84512 0.91529 0.91300 0.95092 0.92084 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.10 7.72 37.16 0.29 -1.82 16 2 C -0.11 -1.94 2.41 -90.62 -0.22 -2.16 16 3 C -0.14 -2.40 8.79 37.16 0.33 -2.08 16 4 C 0.14 2.70 1.61 -69.08 -0.11 2.59 16 5 H 0.10 1.92 6.85 -51.93 -0.36 1.56 16 6 N -0.69 -11.74 4.03 -55.90 -0.23 -11.96 16 7 C 0.55 8.94 6.12 -12.36 -0.08 8.87 16 8 O -0.52 -9.30 11.09 5.31 0.06 -9.24 16 9 C -0.12 -1.67 5.88 -104.94 -0.62 -2.28 16 10 C -0.07 -0.82 9.54 -39.19 -0.37 -1.20 16 11 C -0.12 -1.09 10.03 -39.64 -0.40 -1.49 16 12 C -0.09 -0.70 10.04 -39.50 -0.40 -1.10 16 13 C -0.13 -1.20 9.82 -39.60 -0.39 -1.59 16 14 C 0.01 0.16 6.35 -39.07 -0.25 -0.09 16 15 Cl -0.03 -0.44 26.02 -51.86 -1.35 -1.79 16 16 C 0.44 10.28 5.84 -10.99 -0.06 10.21 16 17 O -0.59 -15.20 15.53 5.54 0.09 -15.11 16 18 N -0.43 -10.69 3.02 -122.20 -0.37 -11.06 16 19 C 0.11 2.32 7.03 59.84 0.42 2.74 16 20 C -0.31 -8.31 9.29 -14.93 -0.14 -8.45 16 21 H 0.10 2.78 7.40 -52.49 -0.39 2.39 16 22 C 0.03 0.86 5.15 -17.47 -0.09 0.77 16 23 N -0.88 -22.63 10.55 55.50 0.59 -22.04 16 24 Si 0.93 20.29 29.57 -169.99 -5.03 15.26 16 25 H -0.27 -5.93 7.11 56.52 0.40 -5.53 16 26 H -0.28 -6.08 7.11 56.52 0.40 -5.68 16 27 H -0.27 -6.00 7.11 56.52 0.40 -5.60 16 28 H 0.04 0.63 8.14 -51.93 -0.42 0.21 16 29 H 0.06 1.02 7.53 -51.93 -0.39 0.63 16 30 H 0.05 0.82 5.78 -51.93 -0.30 0.52 16 31 H 0.10 1.75 4.57 -51.93 -0.24 1.51 16 32 H 0.06 1.28 7.22 -51.93 -0.37 0.90 16 33 H 0.05 0.78 8.14 -51.93 -0.42 0.36 16 34 H 0.05 0.75 7.60 -51.93 -0.39 0.35 16 35 H 0.40 6.64 5.83 -40.82 -0.24 6.40 16 36 H 0.14 1.47 6.41 -52.49 -0.34 1.13 16 37 H 0.13 0.84 8.06 -52.49 -0.42 0.42 16 38 H 0.13 0.67 8.06 -52.49 -0.42 0.24 16 39 H 0.14 1.01 8.06 -52.49 -0.42 0.59 16 40 H 0.07 1.49 6.49 -51.93 -0.34 1.15 16 41 H 0.07 1.59 7.13 -51.93 -0.37 1.21 16 42 H 0.03 0.58 5.75 -51.93 -0.30 0.28 16 43 H 0.27 6.60 8.31 -40.82 -0.34 6.26 16 LS Contribution 354.06 15.07 5.34 5.34 Total: -1.00 -30.12 354.06 -8.26 -38.38 By element: Atomic # 1 Polarization: 14.59 SS G_CDS: -5.27 Total: 9.31 kcal Atomic # 6 Polarization: 5.01 SS G_CDS: -2.09 Total: 2.93 kcal Atomic # 7 Polarization: -45.06 SS G_CDS: -0.01 Total: -45.07 kcal Atomic # 8 Polarization: -24.50 SS G_CDS: 0.15 Total: -24.36 kcal Atomic # 14 Polarization: 20.29 SS G_CDS: -5.03 Total: 15.26 kcal Atomic # 17 Polarization: -0.44 SS G_CDS: -1.35 Total: -1.79 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -30.12 -8.26 -38.38 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000299542541.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.839 kcal (2) G-P(sol) polarization free energy of solvation -30.118 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -22.279 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.259 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.377 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.538 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds