Wall clock time and date at job start Tue Mar 31 2020 20:50:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 O 1.21282 * 119.99875 * 2 1 4 4 N 1.34775 * 120.00215 * 179.97438 * 2 1 3 5 5 C 1.46498 * 119.99918 * 184.96429 * 4 2 1 6 6 H 1.09001 * 109.47139 * 34.63368 * 5 4 2 7 7 C 1.53008 * 109.46798 * 154.62864 * 5 4 2 8 8 C 1.50693 * 109.47025 * 295.00190 * 7 5 4 9 9 O 1.21285 * 120.00212 * 359.97438 * 8 7 5 10 10 N 1.34781 * 120.00072 * 179.97438 * 8 7 5 11 11 C 1.46497 * 120.00258 * 180.27619 * 10 8 7 12 12 H 1.08999 * 109.46780 * 324.72165 * 11 10 8 13 13 C 1.52994 * 109.47277 * 84.72558 * 11 10 8 14 14 C 1.50705 * 109.47027 * 204.72852 * 11 10 8 15 15 H 1.07995 * 119.99946 * 359.97438 * 14 11 10 16 16 C 1.37872 * 119.99781 * 179.97438 * 14 11 10 17 17 N 1.31514 * 120.00124 * 0.02562 * 16 14 11 18 18 Si 1.86798 * 119.99871 * 179.97438 * 16 14 11 19 19 H 1.48500 * 109.47183 * 0.02562 * 18 16 14 20 20 H 1.48503 * 109.46940 * 120.00293 * 18 16 14 21 21 H 1.48500 * 109.47423 * 240.00120 * 18 16 14 22 22 C 1.50697 * 109.47456 * 274.63172 * 5 4 2 23 23 C 1.38247 * 119.98470 * 318.80557 * 22 5 4 24 24 C 1.38215 * 120.01139 * 179.72694 * 23 22 5 25 25 C 1.38352 * 119.98639 * 0.54794 * 24 23 22 26 26 Cl 1.73597 * 120.01310 * 179.74588 * 25 24 23 27 27 C 1.38351 * 119.97247 * 359.72814 * 25 24 23 28 28 C 1.38209 * 119.98913 * 359.97438 * 27 25 24 29 29 H 1.08994 * 109.47539 * 239.99835 * 1 2 3 30 30 H 1.09004 * 109.47346 * 0.02562 * 1 2 3 31 31 H 1.09006 * 109.46626 * 120.00116 * 1 2 3 32 32 H 0.96998 * 119.99777 * 4.96978 * 4 2 1 33 33 H 1.09003 * 109.46871 * 175.00077 * 7 5 4 34 34 H 1.09000 * 109.46740 * 55.00235 * 7 5 4 35 35 H 0.97006 * 119.99528 * 0.02562 * 10 8 7 36 36 H 1.08996 * 109.47215 * 180.02562 * 13 11 10 37 37 H 1.09003 * 109.47190 * 299.99945 * 13 11 10 38 38 H 1.09000 * 109.47298 * 59.99576 * 13 11 10 39 39 H 0.97006 * 119.99675 * 179.97438 * 17 16 14 40 40 H 1.08003 * 119.99067 * 0.02562 * 23 22 5 41 41 H 1.08000 * 120.00707 * 180.27381 * 24 23 22 42 42 H 1.08001 * 120.00422 * 179.97438 * 27 25 24 43 43 H 1.07999 * 119.99725 * 180.02562 * 28 27 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1134 1.0503 0.0000 4 7 2.1809 -1.1672 0.0005 5 6 3.6418 -1.1694 0.1103 6 1 3.9589 -0.3502 0.7556 7 6 4.1061 -2.4989 0.7085 8 6 3.5998 -2.6174 2.1229 9 8 2.9335 -1.7261 2.6052 10 7 3.8873 -3.7140 2.8520 11 6 3.3900 -3.8319 4.2249 12 1 3.3883 -2.8492 4.6963 13 6 1.9659 -4.3907 4.2052 14 6 4.2837 -4.7616 5.0048 15 1 5.1366 -5.2190 4.5255 16 6 4.0126 -5.0279 6.3301 17 7 2.9737 -4.4712 6.9135 18 14 5.1199 -6.1807 7.2965 19 1 6.2109 -6.6723 6.4171 20 1 5.7053 -5.4527 8.4509 21 1 4.3243 -7.3333 7.7903 22 6 4.2487 -0.9949 -1.2580 23 6 3.7083 -1.6592 -2.3433 24 6 4.2611 -1.4951 -3.5995 25 6 5.3623 -0.6749 -3.7686 26 17 6.0611 -0.4735 -5.3449 27 6 5.9061 -0.0149 -2.6811 28 6 5.3487 -0.1748 -1.4265 29 1 -0.3634 -0.5138 0.8899 30 1 -0.3634 1.0277 -0.0005 31 1 -0.3633 -0.5139 -0.8900 32 1 1.6986 -2.0056 -0.0719 33 1 5.1955 -2.5367 0.7082 34 1 3.7138 -3.3225 0.1119 35 1 4.4205 -4.4267 2.4663 36 1 1.5957 -4.4781 5.2267 37 1 1.3195 -3.7183 3.6412 38 1 1.9676 -5.3735 3.7337 39 1 2.7828 -4.6589 7.8459 40 1 2.8511 -2.3026 -2.2104 41 1 3.8361 -2.0106 -4.4481 42 1 6.7660 0.6253 -2.8124 43 1 5.7729 0.3406 -0.5775 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000064333045.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:50:13 Heat of formation + Delta-G solvation = -69.069970 kcal Electronic energy + Delta-G solvation = -26616.676738 eV Core-core repulsion = 22687.073835 eV Total energy + Delta-G solvation = -3929.602903 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 338.118 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -40.42179 -39.00926 -38.71822 -36.79757 -35.43632 -34.62408 -32.48594 -32.04833 -31.28444 -30.09029 -29.42845 -28.23095 -25.32374 -24.43553 -23.11848 -21.71660 -20.86519 -20.33362 -19.46329 -17.75234 -17.15232 -16.77914 -16.34826 -16.07749 -15.41102 -15.24260 -15.04511 -14.91048 -14.51380 -14.13575 -13.80510 -13.72300 -13.70477 -13.30059 -13.04277 -12.70635 -12.47971 -12.26439 -12.17826 -12.01626 -11.74478 -11.70091 -11.54671 -11.32240 -11.11945 -11.03654 -10.98512 -10.78217 -10.35520 -10.29590 -9.79070 -9.30566 -9.23605 -9.10389 -8.99034 -8.75010 -8.60267 -7.97472 -6.17451 -4.26883 0.87745 1.06968 1.88369 2.78183 3.18625 3.20034 3.27810 3.29712 3.31866 3.46325 3.95386 4.31323 4.53359 4.63451 4.68401 4.78055 4.92474 5.07762 5.14132 5.15126 5.21127 5.26011 5.40101 5.42279 5.50715 5.64401 5.65681 5.80006 5.89667 5.97847 6.00128 6.27924 6.54262 6.55334 6.75062 6.87800 7.08388 7.39108 7.49216 7.57089 7.63988 7.85369 8.09505 8.34432 8.59611 8.72676 9.05571 9.41111 10.88480 Molecular weight = 338.12amu Principal moments of inertia in cm(-1) A = 0.014561 B = 0.002559 C = 0.002275 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1922.522886 B =10938.472855 C =12302.234856 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C 0.521 3.479 3 O -0.547 6.547 4 N -0.712 5.712 5 C 0.204 3.796 6 H 0.106 0.894 7 C -0.150 4.150 8 C 0.497 3.503 9 O -0.545 6.545 10 N -0.709 5.709 11 C 0.265 3.735 12 H 0.048 0.952 13 C -0.145 4.145 14 C -0.534 4.534 15 H 0.061 0.939 16 C 0.066 3.934 17 N -0.883 5.883 18 Si 0.901 3.099 19 H -0.273 1.273 20 H -0.283 1.283 21 H -0.283 1.283 22 C -0.083 4.083 23 C -0.094 4.094 24 C -0.112 4.112 25 C -0.037 4.037 26 Cl -0.077 7.077 27 C -0.109 4.109 28 C -0.089 4.089 29 H 0.091 0.909 30 H 0.089 0.911 31 H 0.083 0.917 32 H 0.399 0.601 33 H 0.105 0.895 34 H 0.094 0.906 35 H 0.388 0.612 36 H 0.089 0.911 37 H 0.013 0.987 38 H 0.025 0.975 39 H 0.264 0.736 40 H 0.129 0.871 41 H 0.131 0.869 42 H 0.133 0.867 43 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.684 3.632 -21.320 21.638 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.308 3.692 3 O -0.424 6.424 4 N -0.363 5.363 5 C 0.098 3.902 6 H 0.124 0.876 7 C -0.191 4.191 8 C 0.281 3.719 9 O -0.423 6.423 10 N -0.357 5.357 11 C 0.163 3.837 12 H 0.066 0.934 13 C -0.204 4.204 14 C -0.572 4.572 15 H 0.079 0.921 16 C -0.137 4.137 17 N -0.521 5.521 18 Si 0.729 3.271 19 H -0.197 1.197 20 H -0.209 1.209 21 H -0.209 1.209 22 C -0.084 4.084 23 C -0.112 4.112 24 C -0.131 4.131 25 C -0.064 4.064 26 Cl -0.049 7.049 27 C -0.128 4.128 28 C -0.108 4.108 29 H 0.110 0.890 30 H 0.108 0.892 31 H 0.102 0.898 32 H 0.233 0.767 33 H 0.123 0.877 34 H 0.112 0.888 35 H 0.220 0.780 36 H 0.108 0.892 37 H 0.033 0.967 38 H 0.045 0.955 39 H 0.074 0.926 40 H 0.147 0.853 41 H 0.149 0.851 42 H 0.151 0.849 43 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 0.586 5.052 -20.859 21.470 hybrid contribution 0.670 -1.511 0.218 1.667 sum 1.256 3.541 -20.641 20.980 Atomic orbital electron populations 1.21904 0.91992 1.05268 1.04193 1.20643 0.90410 0.83388 0.74762 1.90695 1.70845 1.31416 1.49424 1.45805 1.06449 1.08946 1.75080 1.19468 0.80285 0.98786 0.91628 0.87585 1.22054 1.03638 0.97726 0.95654 1.20264 0.81329 0.83151 0.87112 1.90707 1.39686 1.39631 1.72277 1.46548 1.53143 1.19230 1.16790 1.18729 0.91300 0.97795 0.75879 0.93431 1.22063 0.97990 0.97340 1.03015 1.21250 1.11702 1.28376 0.95912 0.92053 1.24892 0.95362 0.96030 0.97464 1.69911 1.26796 1.43006 1.12337 0.86399 0.80405 0.80402 0.79926 1.19728 1.20861 1.20865 1.20398 0.95653 0.96411 0.95969 1.20887 0.99677 0.99259 0.91377 1.21001 0.95265 0.98668 0.98125 1.20932 0.97397 1.01562 0.86472 1.98365 1.83908 1.96609 1.25978 1.21032 1.00614 0.99753 0.91369 1.21032 0.95411 0.97378 0.96952 0.89032 0.89234 0.89847 0.76729 0.87695 0.88774 0.77957 0.89204 0.96748 0.95546 0.92605 0.85312 0.85075 0.84905 0.84755 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.72 10.32 36.00 0.37 -1.35 16 2 C 0.52 7.23 7.89 -10.99 -0.09 7.14 16 3 O -0.55 -9.88 16.80 5.56 0.09 -9.78 16 4 N -0.71 -8.55 3.50 -54.93 -0.19 -8.75 16 5 C 0.20 2.54 1.70 -69.08 -0.12 2.43 16 6 H 0.11 1.66 7.30 -51.93 -0.38 1.28 16 7 C -0.15 -1.76 5.21 -27.88 -0.15 -1.90 16 8 C 0.50 8.66 7.65 -10.99 -0.08 8.57 16 9 O -0.54 -11.74 15.02 5.55 0.08 -11.66 16 10 N -0.71 -13.42 5.07 -54.94 -0.28 -13.70 16 11 C 0.26 6.41 2.56 -69.08 -0.18 6.24 16 12 H 0.05 1.36 7.58 -51.93 -0.39 0.96 16 13 C -0.15 -3.43 9.26 37.15 0.34 -3.09 16 14 C -0.53 -13.68 8.73 -34.44 -0.30 -13.98 16 15 H 0.06 1.51 7.74 -52.49 -0.41 1.10 16 16 C 0.07 1.73 5.30 -17.82 -0.09 1.63 16 17 N -0.88 -24.39 11.32 55.43 0.63 -23.76 16 18 Si 0.90 20.21 29.54 -169.99 -5.02 15.18 16 19 H -0.27 -5.97 7.11 56.52 0.40 -5.57 16 20 H -0.28 -6.39 7.11 56.52 0.40 -5.99 16 21 H -0.28 -6.30 7.11 56.52 0.40 -5.90 16 22 C -0.08 -0.90 4.91 -104.62 -0.51 -1.42 16 23 C -0.09 -0.88 9.32 -39.59 -0.37 -1.25 16 24 C -0.11 -1.03 9.83 -39.55 -0.39 -1.42 16 25 C -0.04 -0.37 6.32 -39.50 -0.25 -0.62 16 26 Cl -0.08 -0.72 28.96 -51.86 -1.50 -2.22 16 27 C -0.11 -1.08 9.83 -39.55 -0.39 -1.47 16 28 C -0.09 -0.95 9.67 -39.59 -0.38 -1.34 16 29 H 0.09 0.88 8.14 -51.93 -0.42 0.46 16 30 H 0.09 0.88 8.12 -51.93 -0.42 0.46 16 31 H 0.08 0.58 8.14 -51.93 -0.42 0.16 16 32 H 0.40 3.83 8.61 -40.82 -0.35 3.48 16 33 H 0.10 1.07 8.14 -51.93 -0.42 0.65 16 34 H 0.09 0.85 8.14 -51.93 -0.42 0.43 16 35 H 0.39 6.28 8.54 -40.82 -0.35 5.93 16 36 H 0.09 2.35 6.07 -51.93 -0.32 2.03 16 37 H 0.01 0.31 8.14 -51.93 -0.42 -0.11 16 38 H 0.03 0.57 8.14 -51.93 -0.42 0.15 16 39 H 0.26 6.91 8.31 -40.82 -0.34 6.57 16 40 H 0.13 0.97 7.75 -52.48 -0.41 0.56 16 41 H 0.13 0.97 8.06 -52.49 -0.42 0.55 16 42 H 0.13 1.10 8.06 -52.49 -0.42 0.68 16 43 H 0.13 1.33 8.03 -52.49 -0.42 0.91 16 LS Contribution 383.04 15.07 5.77 5.77 Total: -1.00 -32.96 383.04 -8.96 -41.93 By element: Atomic # 1 Polarization: 14.77 SS G_CDS: -5.96 Total: 8.81 kcal Atomic # 6 Polarization: 0.76 SS G_CDS: -2.58 Total: -1.82 kcal Atomic # 7 Polarization: -46.36 SS G_CDS: 0.16 Total: -46.21 kcal Atomic # 8 Polarization: -21.62 SS G_CDS: 0.18 Total: -21.44 kcal Atomic # 14 Polarization: 20.21 SS G_CDS: -5.02 Total: 15.18 kcal Atomic # 17 Polarization: -0.72 SS G_CDS: -1.50 Total: -2.22 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -32.96 -8.96 -41.93 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000064333045.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.145 kcal (2) G-P(sol) polarization free energy of solvation -32.965 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.110 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.960 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.925 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.070 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds