Wall clock time and date at job start Tue Mar 31 2020 20:50:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 O 1.21288 * 119.99679 * 2 1 4 4 N 1.34776 * 120.00506 * 179.97438 * 2 1 3 5 5 C 1.46502 * 120.00128 * 184.99999 * 4 2 1 6 6 H 1.08993 * 109.46971 * 33.86186 * 5 4 2 7 7 C 1.53000 * 109.47080 * 153.86623 * 5 4 2 8 8 C 1.50696 * 109.46896 * 294.99703 * 7 5 4 9 9 O 1.21284 * 120.00275 * 0.02562 * 8 7 5 10 10 N 1.34775 * 120.00161 * 180.02562 * 8 7 5 11 11 C 1.46499 * 120.00161 * 180.02562 * 10 8 7 12 12 H 1.08993 * 109.47487 * 35.00320 * 11 10 8 13 13 C 1.53000 * 109.47153 * 274.99693 * 11 10 8 14 14 C 1.50701 * 109.47112 * 155.00121 * 11 10 8 15 15 H 1.08002 * 120.00055 * 359.97438 * 14 11 10 16 16 C 1.37880 * 120.00093 * 180.02562 * 14 11 10 17 17 N 1.31514 * 119.99789 * 359.97438 * 16 14 11 18 18 Si 1.86799 * 120.00134 * 180.02562 * 16 14 11 19 19 H 1.48505 * 109.47215 * 359.97438 * 18 16 14 20 20 H 1.48494 * 109.47447 * 119.99615 * 18 16 14 21 21 H 1.48504 * 109.47161 * 239.99836 * 18 16 14 22 22 C 1.50699 * 109.46757 * 273.86336 * 5 4 2 23 23 C 1.38237 * 119.98654 * 134.13350 * 22 5 4 24 24 C 1.38215 * 120.01695 * 180.02562 * 23 22 5 25 25 C 1.38358 * 119.98341 * 0.25688 * 24 23 22 26 26 Cl 1.73603 * 120.01083 * 179.69952 * 25 24 23 27 27 C 1.38351 * 119.97394 * 359.46256 * 25 24 23 28 28 C 1.38218 * 119.98368 * 0.55759 * 27 25 24 29 29 H 1.08999 * 109.47353 * 239.99853 * 1 2 3 30 30 H 1.08999 * 109.47387 * 0.02562 * 1 2 3 31 31 H 1.09010 * 109.46827 * 120.00483 * 1 2 3 32 32 H 0.96997 * 119.99492 * 4.99513 * 4 2 1 33 33 H 1.08999 * 109.46966 * 54.99640 * 7 5 4 34 34 H 1.09001 * 109.46977 * 174.99824 * 7 5 4 35 35 H 0.97000 * 119.99793 * 359.97438 * 10 8 7 36 36 H 1.09003 * 109.47269 * 180.02562 * 13 11 10 37 37 H 1.09002 * 109.47344 * 300.00437 * 13 11 10 38 38 H 1.09004 * 109.46809 * 60.00251 * 13 11 10 39 39 H 0.97004 * 119.99822 * 180.02562 * 17 16 14 40 40 H 1.08002 * 119.99598 * 359.97438 * 23 22 5 41 41 H 1.08003 * 120.00970 * 179.97438 * 24 23 22 42 42 H 1.07998 * 120.01114 * 180.25478 * 27 25 24 43 43 H 1.07996 * 119.99277 * 179.71790 * 28 27 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1133 1.0504 0.0000 4 7 2.1809 -1.1671 0.0005 5 6 3.6418 -1.1694 0.1111 6 1 3.9594 -0.3422 0.7457 7 6 4.1046 -2.4914 0.7267 8 6 3.5975 -2.5911 2.1423 9 8 2.9311 -1.6933 2.6124 10 7 3.8845 -3.6778 2.8860 11 6 3.3910 -3.7749 4.2620 12 1 2.4074 -3.3101 4.3289 13 6 4.3599 -3.0562 5.2031 14 6 3.2892 -5.2254 4.6579 15 1 3.5640 -5.9977 3.9548 16 6 2.8440 -5.5665 5.9175 17 7 2.5088 -4.6261 6.7735 18 14 2.7184 -7.3645 6.4085 19 1 3.1521 -8.2189 5.2740 20 1 3.5913 -7.6192 7.5825 21 1 1.3113 -7.6847 6.7591 22 6 4.2494 -1.0134 -1.2591 23 6 5.2851 -0.1196 -1.4579 24 6 5.8425 0.0243 -2.7145 25 6 5.3601 -0.7225 -3.7746 26 17 6.0545 -0.5365 -5.3548 27 6 4.3275 -1.6210 -3.5738 28 6 3.7706 -1.7638 -2.3168 29 1 -0.3634 -0.5138 0.8899 30 1 -0.3634 1.0276 -0.0005 31 1 -0.3633 -0.5140 -0.8900 32 1 1.6987 -2.0056 -0.0722 33 1 3.7117 -3.3223 0.1407 34 1 5.1939 -2.5303 0.7274 35 1 4.4171 -4.3959 2.5100 36 1 3.9930 -3.1289 6.2270 37 1 5.3436 -3.5211 5.1362 38 1 4.4336 -2.0071 4.9168 39 1 2.1960 -4.8661 7.6598 40 1 5.6583 0.4669 -0.6314 41 1 6.6514 0.7229 -2.8698 42 1 3.9532 -2.2072 -4.4000 43 1 2.9615 -2.4618 -2.1609 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000194718802.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:50:15 Heat of formation + Delta-G solvation = -69.497784 kcal Electronic energy + Delta-G solvation = -26604.695384 eV Core-core repulsion = 22675.073930 eV Total energy + Delta-G solvation = -3929.621455 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 338.118 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -40.41232 -39.00937 -38.70987 -36.80017 -35.43062 -34.61823 -32.48601 -32.03599 -31.29519 -30.08408 -29.41563 -28.22139 -25.31393 -24.43459 -23.12574 -21.71562 -20.84852 -20.33150 -19.45724 -17.74879 -17.14363 -16.77327 -16.34468 -16.07706 -15.43241 -15.25093 -15.00123 -14.87827 -14.50213 -14.18883 -13.81044 -13.73217 -13.70254 -13.33688 -12.96640 -12.68618 -12.46099 -12.25002 -12.19911 -11.98842 -11.76866 -11.66989 -11.55569 -11.31893 -11.12292 -11.03348 -10.99308 -10.76727 -10.34959 -10.29252 -9.78252 -9.30508 -9.23048 -9.09555 -8.98433 -8.76020 -8.60501 -7.97143 -6.17725 -4.27368 0.87086 1.06755 1.87954 2.79507 3.18744 3.19257 3.27263 3.29284 3.31197 3.48384 3.95398 4.30629 4.52597 4.63373 4.68671 4.78554 4.93850 5.07532 5.13562 5.15350 5.21448 5.27775 5.41123 5.43164 5.50735 5.64474 5.65897 5.81000 5.90545 5.97600 5.99931 6.29168 6.54286 6.55330 6.77528 6.91959 7.10385 7.39724 7.49925 7.58419 7.64126 7.85763 8.10043 8.35647 8.59789 8.72315 9.05783 9.40617 10.88122 Molecular weight = 338.12amu Principal moments of inertia in cm(-1) A = 0.015093 B = 0.002514 C = 0.002315 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1854.688541 B =11134.956126 C =12093.594644 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C 0.521 3.479 3 O -0.548 6.548 4 N -0.712 5.712 5 C 0.204 3.796 6 H 0.106 0.894 7 C -0.150 4.150 8 C 0.497 3.503 9 O -0.545 6.545 10 N -0.709 5.709 11 C 0.265 3.735 12 H 0.048 0.952 13 C -0.147 4.147 14 C -0.534 4.534 15 H 0.061 0.939 16 C 0.066 3.934 17 N -0.883 5.883 18 Si 0.901 3.099 19 H -0.273 1.273 20 H -0.283 1.283 21 H -0.283 1.283 22 C -0.084 4.084 23 C -0.087 4.087 24 C -0.110 4.110 25 C -0.036 4.036 26 Cl -0.077 7.077 27 C -0.112 4.112 28 C -0.093 4.093 29 H 0.091 0.909 30 H 0.089 0.911 31 H 0.083 0.917 32 H 0.399 0.601 33 H 0.094 0.906 34 H 0.104 0.896 35 H 0.388 0.612 36 H 0.090 0.910 37 H 0.026 0.974 38 H 0.014 0.986 39 H 0.264 0.736 40 H 0.134 0.866 41 H 0.133 0.867 42 H 0.132 0.868 43 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.885 4.540 -20.541 21.234 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.309 3.691 3 O -0.425 6.425 4 N -0.363 5.363 5 C 0.098 3.902 6 H 0.124 0.876 7 C -0.191 4.191 8 C 0.281 3.719 9 O -0.423 6.423 10 N -0.357 5.357 11 C 0.164 3.836 12 H 0.066 0.934 13 C -0.206 4.206 14 C -0.572 4.572 15 H 0.079 0.921 16 C -0.138 4.138 17 N -0.520 5.520 18 Si 0.728 3.272 19 H -0.197 1.197 20 H -0.209 1.209 21 H -0.209 1.209 22 C -0.086 4.086 23 C -0.106 4.106 24 C -0.128 4.128 25 C -0.063 4.063 26 Cl -0.049 7.049 27 C -0.131 4.131 28 C -0.112 4.112 29 H 0.110 0.890 30 H 0.108 0.892 31 H 0.102 0.898 32 H 0.233 0.767 33 H 0.113 0.887 34 H 0.122 0.878 35 H 0.220 0.780 36 H 0.108 0.892 37 H 0.045 0.955 38 H 0.033 0.967 39 H 0.074 0.926 40 H 0.152 0.848 41 H 0.151 0.849 42 H 0.150 0.850 43 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 2.807 5.978 -20.080 21.138 hybrid contribution 0.082 -1.829 -0.003 1.831 sum 2.888 4.149 -20.083 20.709 Atomic orbital electron populations 1.21905 0.91981 1.05253 1.04231 1.20644 0.90417 0.83378 0.74706 1.90691 1.70858 1.31421 1.49514 1.45811 1.06415 1.08981 1.75044 1.19464 0.80337 0.98898 0.91461 0.87627 1.22057 1.03543 0.97886 0.95618 1.20262 0.81311 0.83281 0.86999 1.90706 1.39623 1.38714 1.73259 1.46548 1.53401 1.19340 1.16435 1.18722 0.94061 0.95982 0.74857 0.93443 1.22079 0.98468 0.96086 1.03964 1.21249 1.45776 0.91082 0.99141 0.92071 1.24898 0.94810 0.97842 0.96201 1.69914 1.43415 1.32063 1.06604 0.86404 0.77815 0.84379 0.78553 1.19743 1.20856 1.20878 1.20396 0.96033 0.96034 0.96099 1.21045 0.95547 0.97254 0.96758 1.21039 1.00664 0.99519 0.91626 1.20939 0.98192 1.00609 0.86566 1.98366 1.83958 1.96946 1.25584 1.21005 0.95827 0.98265 0.98005 1.20899 0.99511 0.99165 0.91576 0.88994 0.89248 0.89840 0.76687 0.88732 0.87762 0.77960 0.89194 0.95512 0.96655 0.92598 0.84777 0.84918 0.85049 0.85269 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.76 10.32 36.00 0.37 -1.39 16 2 C 0.52 7.32 7.90 -10.99 -0.09 7.24 16 3 O -0.55 -9.92 16.78 5.55 0.09 -9.82 16 4 N -0.71 -8.68 3.67 -54.93 -0.20 -8.88 16 5 C 0.20 2.55 1.71 -69.08 -0.12 2.43 16 6 H 0.11 1.65 7.23 -51.93 -0.38 1.27 16 7 C -0.15 -1.76 5.16 -27.88 -0.14 -1.91 16 8 C 0.50 8.67 7.66 -10.99 -0.08 8.59 16 9 O -0.54 -11.76 15.02 5.55 0.08 -11.68 16 10 N -0.71 -13.44 5.07 -54.94 -0.28 -13.72 16 11 C 0.27 6.44 2.56 -69.08 -0.18 6.26 16 12 H 0.05 1.34 7.58 -51.93 -0.39 0.94 16 13 C -0.15 -3.57 9.26 37.16 0.34 -3.23 16 14 C -0.53 -13.60 8.73 -34.44 -0.30 -13.90 16 15 H 0.06 1.49 7.74 -52.49 -0.41 1.08 16 16 C 0.07 1.72 5.30 -17.82 -0.09 1.63 16 17 N -0.88 -24.33 11.32 55.43 0.63 -23.70 16 18 Si 0.90 20.06 29.54 -169.99 -5.02 15.04 16 19 H -0.27 -5.92 7.11 56.52 0.40 -5.52 16 20 H -0.28 -6.29 7.11 56.52 0.40 -5.89 16 21 H -0.28 -6.32 7.11 56.52 0.40 -5.92 16 22 C -0.08 -0.92 4.92 -104.62 -0.51 -1.43 16 23 C -0.09 -0.93 9.67 -39.59 -0.38 -1.32 16 24 C -0.11 -1.09 9.83 -39.55 -0.39 -1.47 16 25 C -0.04 -0.36 6.32 -39.50 -0.25 -0.61 16 26 Cl -0.08 -0.71 28.96 -51.86 -1.50 -2.22 16 27 C -0.11 -1.03 9.83 -39.55 -0.39 -1.42 16 28 C -0.09 -0.87 9.28 -39.59 -0.37 -1.24 16 29 H 0.09 0.92 8.14 -51.93 -0.42 0.49 16 30 H 0.09 0.90 8.12 -51.93 -0.42 0.48 16 31 H 0.08 0.61 8.14 -51.92 -0.42 0.18 16 32 H 0.40 3.94 8.62 -40.82 -0.35 3.59 16 33 H 0.09 0.87 8.14 -51.93 -0.42 0.45 16 34 H 0.10 1.05 8.14 -51.93 -0.42 0.63 16 35 H 0.39 6.28 8.54 -40.82 -0.35 5.94 16 36 H 0.09 2.39 6.07 -51.93 -0.32 2.08 16 37 H 0.03 0.60 8.14 -51.93 -0.42 0.18 16 38 H 0.01 0.35 8.14 -51.93 -0.42 -0.07 16 39 H 0.26 6.90 8.31 -40.82 -0.34 6.56 16 40 H 0.13 1.34 7.99 -52.49 -0.42 0.92 16 41 H 0.13 1.09 8.06 -52.48 -0.42 0.67 16 42 H 0.13 0.97 8.06 -52.49 -0.42 0.55 16 43 H 0.13 0.97 7.90 -52.49 -0.41 0.55 16 LS Contribution 383.18 15.07 5.77 5.77 Total: -1.00 -32.85 383.18 -8.97 -41.82 By element: Atomic # 1 Polarization: 15.12 SS G_CDS: -5.96 Total: 9.16 kcal Atomic # 6 Polarization: 0.81 SS G_CDS: -2.58 Total: -1.77 kcal Atomic # 7 Polarization: -46.45 SS G_CDS: 0.15 Total: -46.30 kcal Atomic # 8 Polarization: -21.68 SS G_CDS: 0.18 Total: -21.50 kcal Atomic # 14 Polarization: 20.06 SS G_CDS: -5.02 Total: 15.04 kcal Atomic # 17 Polarization: -0.71 SS G_CDS: -1.50 Total: -2.22 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -32.85 -8.97 -41.82 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000194718802.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.681 kcal (2) G-P(sol) polarization free energy of solvation -32.849 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.530 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.968 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.817 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.498 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds