Wall clock time and date at job start Tue Mar 31 2020 20:42:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35654 * 117.00288 * 2 1 4 4 C 1.38642 * 120.13787 * 359.97438 * 3 2 1 5 5 C 1.38211 * 120.06857 * 180.02562 * 4 3 2 6 6 Cl 1.73595 * 119.81836 * 180.02562 * 5 4 3 7 7 C 1.38708 * 120.36178 * 0.02562 * 5 4 3 8 8 C 1.37732 * 120.28331 * 359.68102 * 7 5 4 9 9 C 1.39739 * 119.92302 * 0.59526 * 8 7 5 10 10 C 1.47477 * 120.17994 * 179.69797 * 9 8 7 11 11 O 1.21590 * 120.00289 * 179.72814 * 10 9 8 12 12 N 1.34782 * 119.99696 * 359.44897 * 10 9 8 13 13 C 1.46499 * 119.99871 * 180.27329 * 12 10 9 14 14 H 1.09004 * 109.46920 * 325.00391 * 13 12 10 15 15 C 1.52995 * 109.46967 * 85.00330 * 13 12 10 16 16 C 1.53001 * 109.47056 * 205.00504 * 13 12 10 17 17 C 1.53945 * 113.74103 * 162.19974 * 16 13 12 18 18 N 1.47813 * 86.03478 * 222.08220 * 17 16 13 19 19 C 1.36935 * 134.45426 * 204.64279 * 18 17 16 20 20 H 1.07994 * 120.00023 * 182.58544 * 19 18 17 21 21 C 1.38809 * 120.00061 * 2.58700 * 19 18 17 22 22 N 1.31614 * 120.00066 * 353.41149 * 21 19 18 23 23 Si 1.86805 * 119.99982 * 173.41520 * 21 19 18 24 24 H 1.48504 * 109.47073 * 94.97037 * 23 21 19 25 25 H 1.48503 * 109.47086 * 214.96957 * 23 21 19 26 26 H 1.48495 * 109.47182 * 334.97171 * 23 21 19 27 27 C 1.47577 * 91.05116 * 24.54790 * 18 17 16 28 28 H 1.09000 * 109.47387 * 299.99955 * 1 2 3 29 29 H 1.09002 * 109.47294 * 60.00213 * 1 2 3 30 30 H 1.09006 * 109.47328 * 180.02562 * 1 2 3 31 31 H 1.07997 * 119.96824 * 359.97438 * 4 3 2 32 32 H 1.07997 * 119.85246 * 179.97438 * 7 5 4 33 33 H 1.08004 * 120.03309 * 180.29698 * 8 7 5 34 34 H 0.97003 * 120.00021 * 0.28012 * 12 10 9 35 35 H 1.09000 * 109.47363 * 184.48313 * 15 13 12 36 36 H 1.09005 * 109.47323 * 304.49048 * 15 13 12 37 37 H 1.09005 * 109.47285 * 64.48815 * 15 13 12 38 38 H 1.09005 * 112.94340 * 293.79018 * 16 13 12 39 39 H 1.08997 * 113.76690 * 336.34761 * 17 16 13 40 40 H 1.09003 * 113.76988 * 107.74403 * 17 16 13 41 41 H 0.97005 * 120.00312 * 179.97438 * 22 21 19 42 42 H 1.08994 * 113.77036 * 221.14735 * 27 18 17 43 43 H 1.09004 * 113.86822 * 89.76504 * 27 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2926 2.3733 -0.0005 5 6 1.9216 3.6039 -0.0011 6 17 0.9734 5.0580 -0.0011 7 6 3.3064 3.6835 -0.0016 8 6 4.0681 2.5360 0.0050 9 6 3.4445 1.2854 -0.0003 10 6 4.2546 0.0531 0.0000 11 8 3.7087 -1.0334 0.0004 12 7 5.6002 0.1311 -0.0058 13 6 6.4049 -1.0930 -0.0115 14 1 5.9035 -1.8601 0.5787 15 6 6.5736 -1.5856 -1.4502 16 6 7.7801 -0.8022 0.5926 17 6 8.5421 -2.0644 1.0354 18 7 8.9193 -1.2906 2.2369 19 6 9.9544 -1.3520 3.1314 20 1 9.9813 -0.6763 3.9734 21 6 10.9691 -2.2829 2.9557 22 7 10.8727 -3.1904 2.0074 23 14 12.4713 -2.2475 4.0655 24 1 12.2777 -3.1967 5.1911 25 1 13.6720 -2.6424 3.2860 26 1 12.6584 -0.8755 4.6017 27 6 7.7345 -0.4241 2.0842 28 1 -0.3634 0.5138 0.8900 29 1 -0.3634 0.5138 -0.8900 30 1 -0.3634 -1.0277 0.0005 31 1 0.2140 2.3188 -0.0014 32 1 3.7894 4.6495 -0.0024 33 1 5.1461 2.6027 0.0094 34 1 6.0357 0.9979 -0.0061 35 1 7.1038 -2.5380 -1.4483 36 1 5.5926 -1.7167 -1.9068 37 1 7.1448 -0.8530 -2.0204 38 1 8.3756 -0.1205 -0.0148 39 1 7.8958 -2.9163 1.2465 40 1 9.3847 -2.3173 0.3918 41 1 11.5819 -3.8406 1.8844 42 1 7.9334 0.6301 2.2766 43 1 6.8494 -0.7916 2.6037 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000970340672.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:42:00 Heat of formation + Delta-G solvation = 3.459284 kcal Electronic energy + Delta-G solvation = -26538.748624 eV Core-core repulsion = 22612.290825 eV Total energy + Delta-G solvation = -3926.457799 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 338.118 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -40.87905 -39.34796 -38.05273 -37.83168 -36.65462 -34.73296 -32.34639 -31.70419 -30.63690 -29.99557 -27.60531 -27.44531 -24.96597 -24.35306 -23.67192 -22.66526 -21.37156 -20.30551 -19.38558 -18.58835 -17.30771 -16.95676 -16.67447 -16.14216 -15.80532 -15.54062 -15.19207 -14.80026 -14.65471 -14.23122 -14.02375 -13.87482 -13.65976 -13.45432 -13.11013 -12.85812 -12.31610 -12.29712 -12.18784 -11.97041 -11.73452 -11.54092 -11.40979 -11.35468 -11.22835 -11.18483 -10.88303 -10.63336 -10.33977 -10.02264 -9.79242 -9.59340 -9.40488 -9.36518 -8.83647 -8.71886 -8.58598 -6.86091 -5.75517 -3.06228 0.35402 0.90335 1.59913 2.68469 2.90012 3.24807 3.40250 3.45249 3.47471 3.57328 4.24497 4.47031 4.49194 4.58556 4.65933 4.81719 4.84039 5.04974 5.08460 5.15382 5.21107 5.24727 5.44090 5.53523 5.58593 5.67535 5.71321 5.76407 5.86523 6.03556 6.08934 6.12240 6.32274 6.39500 6.48900 6.62884 6.66642 6.84865 6.96989 7.24521 7.39979 7.57487 7.68959 8.00140 8.39810 9.06620 9.73095 10.62758 11.42215 Molecular weight = 338.12amu Principal moments of inertia in cm(-1) A = 0.018381 B = 0.002321 C = 0.002169 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1522.913422 B =12058.906463 C =12908.898330 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.272 6.272 3 C 0.197 3.803 4 C -0.216 4.216 5 C 0.027 3.973 6 Cl -0.063 7.063 7 C -0.158 4.158 8 C -0.034 4.034 9 C -0.163 4.163 10 C 0.557 3.443 11 O -0.519 6.519 12 N -0.716 5.716 13 C 0.152 3.848 14 H 0.088 0.912 15 C -0.157 4.157 16 C -0.147 4.147 17 C 0.176 3.824 18 N -0.612 5.612 19 C -0.223 4.223 20 H 0.079 0.921 21 C -0.008 4.008 22 N -0.921 5.921 23 Si 0.910 3.090 24 H -0.290 1.290 25 H -0.290 1.290 26 H -0.280 1.280 27 C 0.125 3.875 28 H 0.057 0.943 29 H 0.057 0.943 30 H 0.106 0.894 31 H 0.144 0.856 32 H 0.142 0.858 33 H 0.145 0.855 34 H 0.395 0.605 35 H 0.069 0.931 36 H 0.053 0.947 37 H 0.053 0.947 38 H 0.088 0.912 39 H 0.029 0.971 40 H 0.073 0.927 41 H 0.253 0.747 42 H 0.040 0.960 43 H 0.032 0.968 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -21.269 14.525 -8.447 27.105 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.182 6.182 3 C 0.148 3.852 4 C -0.235 4.235 5 C 0.000 4.000 6 Cl -0.034 7.034 7 C -0.177 4.177 8 C -0.053 4.053 9 C -0.167 4.167 10 C 0.343 3.657 11 O -0.395 6.395 12 N -0.368 5.368 13 C 0.048 3.952 14 H 0.106 0.894 15 C -0.216 4.216 16 C -0.167 4.167 17 C 0.050 3.950 18 N -0.339 5.339 19 C -0.350 4.350 20 H 0.097 0.903 21 C -0.205 4.205 22 N -0.568 5.568 23 Si 0.741 3.259 24 H -0.217 1.217 25 H -0.216 1.216 26 H -0.206 1.206 27 C -0.001 4.001 28 H 0.076 0.924 29 H 0.075 0.925 30 H 0.124 0.876 31 H 0.162 0.838 32 H 0.159 0.841 33 H 0.163 0.837 34 H 0.230 0.770 35 H 0.088 0.912 36 H 0.072 0.928 37 H 0.072 0.928 38 H 0.107 0.893 39 H 0.046 0.954 40 H 0.091 0.909 41 H 0.063 0.937 42 H 0.059 0.941 43 H 0.050 0.950 Dipole moment (debyes) X Y Z Total from point charges -21.349 13.504 -8.304 26.591 hybrid contribution 0.595 0.690 0.718 1.160 sum -20.754 14.194 -7.586 26.262 Atomic orbital electron populations 1.23230 0.78497 1.04702 1.01276 1.86441 1.20924 1.24603 1.86248 1.18863 0.90859 0.84566 0.90940 1.21060 1.00988 0.90339 1.11131 1.20839 0.91983 0.87279 0.99937 1.98391 1.72387 1.36066 1.96532 1.20891 0.91261 0.99820 1.05689 1.21187 1.00366 0.90033 0.93678 1.19613 0.90901 0.94683 1.11485 1.17835 0.82272 0.88259 0.77297 1.90829 1.71556 1.28450 1.48689 1.46044 1.05420 1.10327 1.74991 1.21110 0.91134 0.86161 0.96802 0.89369 1.22109 1.01510 1.01785 0.96158 1.23841 0.93764 1.02651 0.96422 1.22229 0.94801 0.90177 0.87785 1.46047 1.22141 1.34817 1.30857 1.19025 0.96905 1.15291 1.03826 0.90337 1.24776 0.98889 0.97638 0.99149 1.69822 1.33573 1.18916 1.34488 0.86128 0.82702 0.77541 0.79548 1.21712 1.21595 1.20601 1.22531 0.90551 0.95027 0.91969 0.92416 0.92463 0.87616 0.83806 0.84052 0.83692 0.77017 0.91157 0.92795 0.92760 0.89331 0.95370 0.90857 0.93651 0.94144 0.95006 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.13 9.81 101.05 0.99 1.12 16 2 O -0.27 -3.38 8.57 -40.55 -0.35 -3.72 16 3 C 0.20 2.26 6.70 -38.70 -0.26 2.00 16 4 C -0.22 -1.95 8.80 -39.44 -0.35 -2.29 16 5 C 0.03 0.23 6.32 -39.42 -0.25 -0.02 16 6 Cl -0.06 -0.48 28.94 -51.86 -1.50 -1.98 16 7 C -0.16 -1.26 9.80 -39.59 -0.39 -1.65 16 8 C -0.03 -0.30 9.53 -39.21 -0.37 -0.67 16 9 C -0.16 -1.93 5.89 -104.84 -0.62 -2.55 16 10 C 0.56 8.14 7.73 -12.49 -0.10 8.05 16 11 O -0.52 -9.52 14.82 -16.60 -0.25 -9.77 16 12 N -0.72 -9.40 4.90 -54.87 -0.27 -9.67 16 13 C 0.15 2.36 2.28 -67.93 -0.16 2.21 16 14 H 0.09 1.59 7.49 -51.93 -0.39 1.20 16 15 C -0.16 -2.23 9.43 37.15 0.35 -1.88 16 16 C -0.15 -2.60 3.35 -89.70 -0.30 -2.90 16 17 C 0.18 4.08 7.03 -2.84 -0.02 4.06 16 18 N -0.61 -15.74 3.70 -177.72 -0.66 -16.40 16 19 C -0.22 -6.30 10.69 -15.06 -0.16 -6.46 16 20 H 0.08 2.15 7.84 -52.49 -0.41 1.73 16 21 C -0.01 -0.23 5.50 -17.43 -0.10 -0.33 16 22 N -0.92 -27.42 11.43 55.49 0.63 -26.78 16 23 Si 0.91 22.23 29.56 -169.99 -5.02 17.20 16 24 H -0.29 -7.09 7.11 56.52 0.40 -6.68 16 25 H -0.29 -7.09 7.11 56.52 0.40 -6.69 16 26 H -0.28 -6.64 7.11 56.52 0.40 -6.24 16 27 C 0.13 2.53 8.38 -2.97 -0.02 2.50 16 28 H 0.06 0.34 7.66 -51.93 -0.40 -0.06 16 29 H 0.06 0.32 7.66 -51.93 -0.40 -0.07 16 30 H 0.11 0.65 8.14 -51.93 -0.42 0.23 16 31 H 0.14 1.00 6.30 -52.49 -0.33 0.67 16 32 H 0.14 0.84 8.06 -52.49 -0.42 0.42 16 33 H 0.15 0.93 6.40 -52.48 -0.34 0.59 16 34 H 0.40 4.09 6.63 -40.82 -0.27 3.82 16 35 H 0.07 1.02 8.14 -51.93 -0.42 0.59 16 36 H 0.05 0.78 8.14 -51.93 -0.42 0.36 16 37 H 0.05 0.69 8.14 -51.93 -0.42 0.27 16 38 H 0.09 1.49 8.14 -51.93 -0.42 1.07 16 39 H 0.03 0.68 8.04 -51.93 -0.42 0.26 16 40 H 0.07 1.86 7.20 -51.93 -0.37 1.49 16 41 H 0.25 7.30 8.31 -40.82 -0.34 6.96 16 42 H 0.04 0.75 8.14 -51.93 -0.42 0.33 16 43 H 0.03 0.66 8.10 -51.93 -0.42 0.24 16 LS Contribution 373.02 15.07 5.62 5.62 Total: -1.00 -34.46 373.02 -9.38 -43.84 By element: Atomic # 1 Polarization: 6.33 SS G_CDS: -5.84 Total: 0.49 kcal Atomic # 6 Polarization: 2.93 SS G_CDS: -1.75 Total: 1.18 kcal Atomic # 7 Polarization: -52.56 SS G_CDS: -0.29 Total: -52.85 kcal Atomic # 8 Polarization: -12.90 SS G_CDS: -0.59 Total: -13.49 kcal Atomic # 14 Polarization: 22.23 SS G_CDS: -5.02 Total: 17.20 kcal Atomic # 17 Polarization: -0.48 SS G_CDS: -1.50 Total: -1.98 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -34.46 -9.38 -43.84 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000970340672.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.297 kcal (2) G-P(sol) polarization free energy of solvation -34.461 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.836 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.377 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.838 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.459 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds