Wall clock time and date at job start Tue Mar 31 2020 20:41:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35741 * 116.99715 * 2 1 4 4 C 1.38968 * 119.91471 * 0.02951 * 3 2 1 5 5 C 1.37713 * 120.10042 * 179.69183 * 4 3 2 6 6 C 1.39740 * 119.93099 * 0.57844 * 5 4 3 7 7 C 1.47604 * 120.08385 * 179.69216 * 6 5 4 8 8 O 1.21583 * 120.00034 * 179.72130 * 7 6 5 9 9 N 1.34779 * 119.99716 * 359.72652 * 7 6 5 10 10 C 1.46501 * 119.99698 * 179.97438 * 9 7 6 11 11 H 1.09005 * 109.47204 * 324.99663 * 10 9 7 12 12 C 1.52994 * 109.47478 * 85.00105 * 10 9 7 13 13 C 1.53007 * 109.47063 * 205.00339 * 10 9 7 14 14 C 1.53943 * 113.73967 * 161.99682 * 13 10 9 15 15 N 1.47812 * 86.03288 * 222.07840 * 14 13 10 16 16 C 1.36941 * 134.45949 * 204.64456 * 15 14 13 17 17 H 1.07998 * 120.00363 * 179.86974 * 16 15 14 18 18 C 1.38817 * 119.99599 * 359.86590 * 16 15 14 19 19 N 1.31619 * 119.99967 * 0.02562 * 18 16 15 20 20 Si 1.86797 * 119.99796 * 179.97438 * 18 16 15 21 21 H 1.48508 * 109.46990 * 90.00397 * 20 18 16 22 22 H 1.48496 * 109.47393 * 210.00324 * 20 18 16 23 23 H 1.48504 * 109.47588 * 330.00800 * 20 18 16 24 24 C 1.47584 * 91.05227 * 24.55205 * 15 14 13 25 25 C 1.39716 * 119.83351 * 359.42007 * 6 5 4 26 26 C 1.37820 * 119.89341 * 0.27850 * 25 6 5 27 27 Cl 1.73608 * 119.96425 * 180.02562 * 26 25 6 28 28 H 1.09006 * 109.47297 * 299.99569 * 1 2 3 29 29 H 1.09003 * 109.47597 * 59.99483 * 1 2 3 30 30 H 1.09002 * 109.47060 * 180.02562 * 1 2 3 31 31 H 1.08004 * 119.95248 * 359.97438 * 4 3 2 32 32 H 1.08002 * 120.03420 * 180.27277 * 5 4 3 33 33 H 0.96998 * 120.00689 * 359.97438 * 9 7 6 34 34 H 1.09003 * 109.47358 * 55.80638 * 12 10 9 35 35 H 1.09001 * 109.46924 * 295.80963 * 12 10 9 36 36 H 1.08997 * 109.47324 * 175.80826 * 12 10 9 37 37 H 1.09000 * 112.94115 * 293.58427 * 13 10 9 38 38 H 1.08997 * 113.77139 * 336.34419 * 14 13 10 39 39 H 1.09007 * 113.76732 * 107.74921 * 14 13 10 40 40 H 0.97001 * 119.99789 * 179.97438 * 19 18 16 41 41 H 1.08998 * 113.77081 * 221.14893 * 24 15 14 42 42 H 1.08993 * 113.87010 * 89.76485 * 24 15 14 43 43 H 1.07995 * 120.05620 * 180.25189 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0451 1.2095 0.0000 4 6 1.2865 2.3738 0.0006 5 6 1.9076 3.6029 0.0070 6 6 3.3029 3.6790 0.0007 7 6 3.9722 4.9946 0.0007 8 8 5.1863 5.0590 0.0003 9 7 3.2373 6.1244 0.0012 10 6 3.9016 7.4302 0.0017 11 1 4.8167 7.3721 0.5912 12 6 4.2448 7.8285 -1.4350 13 6 2.9676 8.4773 0.6120 14 6 3.6871 9.7605 1.0654 15 7 2.8258 9.6969 2.2649 16 6 2.3656 10.6204 3.1653 17 1 1.7273 10.3096 3.9791 18 6 2.7198 11.9559 3.0320 19 7 3.4975 12.3347 2.0400 20 14 2.0916 13.2158 4.2598 21 1 3.0523 13.3308 5.3865 22 1 1.9542 14.5340 3.5901 23 1 0.7690 12.7842 4.7793 24 6 2.6589 8.2397 2.1013 25 6 4.0630 2.5066 0.0001 26 6 3.4341 1.2803 0.0000 27 17 4.3767 -0.1776 0.0000 28 1 -0.3634 0.5138 0.8901 29 1 -0.3634 0.5139 -0.8899 30 1 -0.3633 -1.0277 0.0005 31 1 0.2081 2.3147 0.0007 32 1 1.3170 4.5071 0.0120 33 1 2.2687 6.0731 0.0012 34 1 3.3396 7.8142 -2.0422 35 1 4.9681 7.1233 -1.8446 36 1 4.6712 8.8315 -1.4420 37 1 2.0818 8.6622 0.0043 38 1 4.7468 9.6184 1.2774 39 1 3.4912 10.6226 0.4278 40 1 3.7447 13.2680 1.9466 41 1 1.6439 7.8898 2.2893 42 1 3.4150 7.6484 2.6178 43 1 5.1416 2.5613 -0.0006 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000970855242.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:41:50 Heat of formation + Delta-G solvation = 1.424245 kcal Electronic energy + Delta-G solvation = -26190.783363 eV Core-core repulsion = 22264.237319 eV Total energy + Delta-G solvation = -3926.546045 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 338.118 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -40.84924 -39.78014 -38.25685 -37.43413 -36.60032 -34.87801 -32.31341 -31.52908 -31.12222 -29.90896 -27.84459 -27.47812 -24.93175 -24.27321 -23.59566 -23.00205 -21.33621 -20.39879 -19.36604 -18.76839 -17.57373 -17.05203 -16.72420 -16.33459 -15.83527 -15.58016 -14.94750 -14.78794 -14.58043 -14.42285 -14.22616 -13.95444 -13.58134 -13.56066 -13.21023 -13.10476 -12.43835 -12.32490 -12.08504 -11.93401 -11.63339 -11.58472 -11.47968 -11.41253 -11.22240 -11.18718 -10.89372 -10.67949 -10.35974 -10.14147 -9.82951 -9.70417 -9.43671 -9.36657 -8.93411 -8.79825 -8.60782 -6.88166 -5.77426 -3.09497 0.47699 0.73292 1.81369 2.61583 2.66131 3.19915 3.38601 3.43256 3.45295 3.51851 4.23180 4.33590 4.44478 4.54330 4.63272 4.67133 4.74457 4.94798 5.02659 5.10682 5.16681 5.29609 5.38678 5.47362 5.54607 5.62382 5.68409 5.80875 5.82419 5.98394 6.04861 6.09766 6.27576 6.34769 6.44090 6.57038 6.62043 6.70551 6.78986 7.21783 7.35370 7.54828 7.58593 7.97645 8.25924 9.04161 9.70394 10.59483 11.39861 Molecular weight = 338.12amu Principal moments of inertia in cm(-1) A = 0.020060 B = 0.002175 C = 0.002065 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1395.467930 B =12872.885556 C =13558.998354 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.302 6.302 3 C 0.159 3.841 4 C -0.206 4.206 5 C -0.039 4.039 6 C -0.156 4.156 7 C 0.560 3.440 8 O -0.538 6.538 9 N -0.713 5.713 10 C 0.150 3.850 11 H 0.089 0.911 12 C -0.158 4.158 13 C -0.147 4.147 14 C 0.176 3.824 15 N -0.612 5.612 16 C -0.223 4.223 17 H 0.079 0.921 18 C -0.008 4.008 19 N -0.921 5.921 20 Si 0.912 3.088 21 H -0.289 1.289 22 H -0.290 1.290 23 H -0.281 1.281 24 C 0.125 3.875 25 C -0.013 4.013 26 C -0.079 4.079 27 Cl -0.052 7.052 28 H 0.061 0.939 29 H 0.060 0.940 30 H 0.104 0.896 31 H 0.144 0.856 32 H 0.138 0.862 33 H 0.397 0.603 34 H 0.053 0.947 35 H 0.054 0.946 36 H 0.072 0.928 37 H 0.089 0.911 38 H 0.029 0.971 39 H 0.075 0.925 40 H 0.254 0.746 41 H 0.040 0.960 42 H 0.033 0.967 43 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.288 -24.587 -8.511 26.767 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 O -0.214 6.214 3 C 0.112 3.888 4 C -0.224 4.224 5 C -0.058 4.058 6 C -0.160 4.160 7 C 0.347 3.653 8 O -0.416 6.416 9 N -0.363 5.363 10 C 0.046 3.954 11 H 0.107 0.893 12 C -0.217 4.217 13 C -0.168 4.168 14 C 0.050 3.950 15 N -0.338 5.338 16 C -0.351 4.351 17 H 0.097 0.903 18 C -0.205 4.205 19 N -0.568 5.568 20 Si 0.742 3.258 21 H -0.216 1.216 22 H -0.216 1.216 23 H -0.207 1.207 24 C -0.001 4.001 25 C -0.033 4.033 26 C -0.107 4.107 27 Cl -0.023 7.023 28 H 0.079 0.921 29 H 0.079 0.921 30 H 0.123 0.877 31 H 0.162 0.838 32 H 0.156 0.844 33 H 0.232 0.768 34 H 0.072 0.928 35 H 0.073 0.927 36 H 0.091 0.909 37 H 0.107 0.893 38 H 0.046 0.954 39 H 0.093 0.907 40 H 0.064 0.936 41 H 0.058 0.942 42 H 0.050 0.950 43 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges -5.305 -24.504 -8.364 26.430 hybrid contribution -0.940 0.685 0.780 1.400 sum -6.245 -23.818 -7.584 25.765 Atomic orbital electron populations 1.23195 0.77552 1.04583 1.01844 1.86138 1.21978 1.25829 1.87497 1.18925 0.90506 0.85295 0.94104 1.21146 1.00594 0.91265 1.09440 1.21248 0.93387 0.97852 0.93274 1.19877 0.93428 0.93718 1.08976 1.17971 0.86977 0.83699 0.76648 1.90790 1.13375 1.87358 1.50070 1.46046 1.10058 1.05881 1.74325 1.21161 0.96816 0.80483 0.96925 0.89258 1.22115 1.01377 1.02160 0.96023 1.23863 0.99353 0.97164 0.96370 1.22231 0.92541 0.92545 0.87682 1.45995 1.55952 1.00985 1.30914 1.19020 1.24121 0.86955 1.04974 0.90330 1.24784 0.99989 0.96950 0.98772 1.69806 1.39492 1.15898 1.31649 0.86129 0.78283 0.81030 0.80359 1.21619 1.21615 1.20663 1.22536 0.97883 0.87799 0.91899 1.21023 1.01501 0.88372 0.92388 1.20027 0.88731 0.89074 1.12842 1.98376 1.71680 1.35083 1.97143 0.92075 0.92127 0.87738 0.83850 0.84388 0.76849 0.92781 0.92704 0.90947 0.89323 0.95361 0.90668 0.93613 0.94211 0.94972 0.82835 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.10 9.81 101.05 0.99 1.09 16 2 O -0.30 -2.54 9.94 -18.93 -0.19 -2.72 16 3 C 0.16 1.47 6.69 -39.00 -0.26 1.21 16 4 C -0.21 -1.54 9.01 -39.50 -0.36 -1.90 16 5 C -0.04 -0.32 9.53 -39.21 -0.37 -0.70 16 6 C -0.16 -1.73 5.87 -104.96 -0.62 -2.35 16 7 C 0.56 7.68 7.73 -12.44 -0.10 7.59 16 8 O -0.54 -9.32 16.00 5.29 0.08 -9.23 16 9 N -0.71 -8.89 4.90 -54.82 -0.27 -9.16 16 10 C 0.15 2.25 2.29 -67.93 -0.16 2.10 16 11 H 0.09 1.56 7.49 -51.93 -0.39 1.17 16 12 C -0.16 -2.17 9.46 37.15 0.35 -1.82 16 13 C -0.15 -2.55 3.35 -89.69 -0.30 -2.85 16 14 C 0.18 4.01 6.90 -2.84 -0.02 3.99 16 15 N -0.61 -15.54 3.70 -177.73 -0.66 -16.20 16 16 C -0.22 -6.25 10.70 -15.06 -0.16 -6.41 16 17 H 0.08 2.12 7.83 -52.49 -0.41 1.71 16 18 C -0.01 -0.24 5.50 -17.43 -0.10 -0.34 16 19 N -0.92 -27.19 11.39 55.49 0.63 -26.56 16 20 Si 0.91 22.09 29.55 -169.99 -5.02 17.06 16 21 H -0.29 -7.02 7.11 56.52 0.40 -6.61 16 22 H -0.29 -7.05 7.11 56.52 0.40 -6.65 16 23 H -0.28 -6.60 7.11 56.52 0.40 -6.20 16 24 C 0.12 2.47 8.38 -2.97 -0.02 2.44 16 25 C -0.01 -0.15 9.36 -39.18 -0.37 -0.52 16 26 C -0.08 -0.83 6.33 -39.43 -0.25 -1.08 16 27 Cl -0.05 -0.53 28.49 -51.86 -1.48 -2.01 16 28 H 0.06 0.20 7.65 -51.93 -0.40 -0.19 16 29 H 0.06 0.19 7.65 -51.93 -0.40 -0.21 16 30 H 0.10 0.27 8.14 -51.93 -0.42 -0.15 16 31 H 0.14 0.67 6.28 -52.48 -0.33 0.34 16 32 H 0.14 0.83 6.39 -52.49 -0.34 0.49 16 33 H 0.40 3.88 6.62 -40.82 -0.27 3.60 16 34 H 0.05 0.66 8.14 -51.93 -0.42 0.24 16 35 H 0.05 0.76 8.14 -51.93 -0.42 0.34 16 36 H 0.07 1.02 7.99 -51.93 -0.42 0.60 16 37 H 0.09 1.46 8.14 -51.93 -0.42 1.04 16 38 H 0.03 0.67 8.03 -51.93 -0.42 0.26 16 39 H 0.08 1.89 7.16 -51.93 -0.37 1.52 16 40 H 0.25 7.26 8.31 -40.82 -0.34 6.92 16 41 H 0.04 0.73 8.14 -51.93 -0.42 0.30 16 42 H 0.03 0.65 8.10 -51.93 -0.42 0.23 16 43 H 0.15 1.76 7.64 -52.49 -0.40 1.36 16 LS Contribution 374.07 15.07 5.64 5.64 Total: -1.00 -33.82 374.07 -8.80 -42.62 By element: Atomic # 1 Polarization: 5.92 SS G_CDS: -5.80 Total: 0.12 kcal Atomic # 6 Polarization: 2.19 SS G_CDS: -1.73 Total: 0.45 kcal Atomic # 7 Polarization: -51.63 SS G_CDS: -0.29 Total: -51.92 kcal Atomic # 8 Polarization: -11.86 SS G_CDS: -0.10 Total: -11.96 kcal Atomic # 14 Polarization: 22.09 SS G_CDS: -5.02 Total: 17.06 kcal Atomic # 17 Polarization: -0.53 SS G_CDS: -1.48 Total: -2.01 kcal Total LS contribution 5.64 Total: 5.64 kcal Total: -33.82 -8.80 -42.62 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000970855242.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.044 kcal (2) G-P(sol) polarization free energy of solvation -33.819 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.225 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.801 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.620 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.424 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds