Wall clock time and date at job start Tue Mar 31 2020 20:41:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35650 * 117.00023 * 2 1 4 4 C 1.38675 * 120.14620 * 0.02562 * 3 2 1 5 5 C 1.38095 * 120.12511 * 179.97438 * 4 3 2 6 6 C 1.38483 * 120.41004 * 0.03834 * 5 4 3 7 7 C 1.37963 * 120.28529 * 0.02562 * 6 5 4 8 8 Cl 1.73601 * 120.06025 * 179.97438 * 7 6 5 9 9 C 1.39838 * 119.87321 * 0.24887 * 7 6 5 10 10 C 1.47466 * 120.19984 * 179.70281 * 9 7 6 11 11 O 1.21596 * 119.99525 * 90.00557 * 10 9 7 12 12 N 1.34776 * 120.00017 * 270.00222 * 10 9 7 13 13 C 1.46497 * 119.99644 * 180.02562 * 12 10 9 14 14 H 1.08998 * 109.47411 * 324.99721 * 13 12 10 15 15 C 1.53008 * 109.47262 * 85.00188 * 13 12 10 16 16 C 1.53001 * 109.47032 * 205.00140 * 13 12 10 17 17 C 1.53943 * 113.74205 * 162.06394 * 16 13 12 18 18 N 1.47583 * 86.11798 * 222.04568 * 17 16 13 19 19 C 1.36935 * 134.49485 * 204.64030 * 18 17 16 20 20 H 1.08003 * 119.99922 * 182.74120 * 19 18 17 21 21 C 1.38813 * 119.99892 * 2.74817 * 19 18 17 22 22 N 1.31614 * 120.00013 * 353.40297 * 21 19 18 23 23 Si 1.86800 * 119.99909 * 173.41138 * 21 19 18 24 24 H 1.48502 * 109.47582 * 94.96570 * 23 21 19 25 25 H 1.48504 * 109.47091 * 214.96849 * 23 21 19 26 26 H 1.48501 * 109.47303 * 334.96344 * 23 21 19 27 27 C 1.47581 * 91.01167 * 24.64092 * 18 17 16 28 28 H 1.09002 * 109.46972 * 299.99463 * 1 2 3 29 29 H 1.08995 * 109.46990 * 60.00277 * 1 2 3 30 30 H 1.08997 * 109.46729 * 180.02562 * 1 2 3 31 31 H 1.07997 * 119.93489 * 359.97438 * 4 3 2 32 32 H 1.08000 * 119.79268 * 180.02562 * 5 4 3 33 33 H 1.07995 * 119.85053 * 179.97438 * 6 5 4 34 34 H 0.96993 * 120.00039 * 359.97438 * 12 10 9 35 35 H 1.08996 * 109.47281 * 64.47832 * 15 13 12 36 36 H 1.09000 * 109.46650 * 184.48220 * 15 13 12 37 37 H 1.08997 * 109.46672 * 304.47894 * 15 13 12 38 38 H 1.09000 * 112.94438 * 293.79402 * 16 13 12 39 39 H 1.09000 * 113.77346 * 336.34680 * 17 16 13 40 40 H 1.09003 * 113.77126 * 107.74429 * 17 16 13 41 41 H 0.97004 * 120.00167 * 180.02562 * 22 21 19 42 42 H 1.09001 * 113.76836 * 221.06523 * 27 18 17 43 43 H 1.08993 * 113.87600 * 89.67630 * 27 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2086 0.0000 4 6 1.2925 2.3736 0.0005 5 6 1.9199 3.6038 0.0011 6 6 3.3023 3.6857 0.0003 7 6 4.0673 2.5375 -0.0016 8 17 5.7999 2.6470 -0.0032 9 6 3.4444 1.2856 -0.0080 10 6 4.2550 0.0537 -0.0166 11 8 4.5909 -0.4603 1.0329 12 7 4.6235 -0.5022 -1.1877 13 6 5.4284 -1.7263 -1.1962 14 1 6.1218 -1.7111 -0.3553 15 6 4.5080 -2.9427 -1.0765 16 6 6.2161 -1.8096 -2.5052 17 6 7.4013 -2.7907 -2.4540 18 7 8.1585 -1.7575 -3.1870 19 6 9.2472 -1.7736 -4.0174 20 1 9.6457 -0.8470 -4.4034 21 6 9.8385 -2.9810 -4.3631 22 7 9.4372 -4.0974 -3.7932 23 14 11.2041 -3.0211 -5.6371 24 1 12.5212 -2.9773 -4.9527 25 1 11.1014 -4.2703 -6.4336 26 1 11.0752 -1.8478 -6.5382 27 6 7.2710 -0.6999 -2.6655 28 1 -0.3633 0.5138 0.8901 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 0.2140 2.3186 0.0005 32 1 1.3288 4.5077 0.0019 33 1 3.7836 4.6525 0.0003 34 1 4.3553 -0.0924 -2.0248 35 1 3.8685 -3.0025 -1.9571 36 1 5.1104 -3.8482 -1.0027 37 1 3.8897 -2.8440 -0.1844 38 1 5.5766 -1.9366 -3.3787 39 1 7.7743 -2.9770 -1.4469 40 1 7.2398 -3.7050 -3.0250 41 1 9.8507 -4.9410 -4.0345 42 1 7.0054 0.0551 -3.4054 43 1 7.6041 -0.2707 -1.7206 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000970923921.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:41:55 Heat of formation + Delta-G solvation = 2.873754 kcal Electronic energy + Delta-G solvation = -27044.759169 eV Core-core repulsion = 23118.275980 eV Total energy + Delta-G solvation = -3926.483189 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 338.118 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -40.85670 -39.35971 -38.13462 -37.67154 -36.49459 -34.67675 -32.29120 -31.75799 -30.48311 -30.01874 -27.75112 -27.41252 -24.97440 -24.35024 -23.62970 -22.57314 -21.37735 -20.34180 -19.32239 -18.52004 -17.38446 -16.88753 -16.73279 -16.29531 -15.86803 -15.61472 -15.23537 -14.75986 -14.63764 -14.26852 -13.87742 -13.74652 -13.62582 -13.42515 -13.01777 -12.79130 -12.28590 -12.21518 -12.16576 -11.95018 -11.72677 -11.49932 -11.32804 -11.24070 -11.18922 -11.17248 -10.85911 -10.60893 -10.31025 -10.07215 -9.75697 -9.60594 -9.36454 -9.18467 -8.76725 -8.68244 -8.67426 -6.82528 -5.72578 -3.03062 0.59017 0.86682 1.76142 2.70863 2.87854 3.07187 3.36186 3.42127 3.47042 3.49264 4.30759 4.49731 4.51012 4.64278 4.70960 4.75637 4.85651 4.88438 5.09941 5.16218 5.22921 5.29222 5.48078 5.60340 5.66175 5.71427 5.75103 5.86253 5.91098 6.05575 6.08544 6.16657 6.36368 6.45154 6.54336 6.66993 6.71007 6.86175 6.89418 7.28010 7.44195 7.60848 7.70427 8.03452 8.37370 9.09840 9.76051 10.66441 11.45116 Molecular weight = 338.12amu Principal moments of inertia in cm(-1) A = 0.017195 B = 0.002930 C = 0.002651 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1628.010169 B = 9553.401144 C =10557.996860 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.303 6.303 3 C 0.173 3.827 4 C -0.210 4.210 5 C -0.054 4.054 6 C -0.151 4.151 7 C 0.030 3.970 8 Cl -0.038 7.038 9 C -0.151 4.151 10 C 0.574 3.426 11 O -0.527 6.527 12 N -0.705 5.705 13 C 0.151 3.849 14 H 0.088 0.912 15 C -0.156 4.156 16 C -0.146 4.146 17 C 0.176 3.824 18 N -0.612 5.612 19 C -0.222 4.222 20 H 0.079 0.921 21 C -0.008 4.008 22 N -0.921 5.921 23 Si 0.910 3.090 24 H -0.290 1.290 25 H -0.290 1.290 26 H -0.281 1.281 27 C 0.126 3.874 28 H 0.058 0.942 29 H 0.059 0.941 30 H 0.105 0.895 31 H 0.139 0.861 32 H 0.138 0.862 33 H 0.141 0.859 34 H 0.398 0.602 35 H 0.053 0.947 36 H 0.069 0.931 37 H 0.054 0.946 38 H 0.088 0.912 39 H 0.028 0.972 40 H 0.073 0.927 41 H 0.253 0.747 42 H 0.040 0.960 43 H 0.032 0.968 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -22.317 14.395 7.504 27.597 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.215 6.215 3 C 0.125 3.875 4 C -0.229 4.229 5 C -0.072 4.072 6 C -0.170 4.170 7 C 0.003 3.997 8 Cl -0.008 7.008 9 C -0.156 4.156 10 C 0.358 3.642 11 O -0.403 6.403 12 N -0.354 5.354 13 C 0.047 3.953 14 H 0.106 0.894 15 C -0.214 4.214 16 C -0.166 4.166 17 C 0.050 3.950 18 N -0.338 5.338 19 C -0.350 4.350 20 H 0.096 0.904 21 C -0.204 4.204 22 N -0.568 5.568 23 Si 0.740 3.260 24 H -0.217 1.217 25 H -0.216 1.216 26 H -0.206 1.206 27 C 0.000 4.000 28 H 0.077 0.923 29 H 0.078 0.922 30 H 0.123 0.877 31 H 0.157 0.843 32 H 0.156 0.844 33 H 0.159 0.841 34 H 0.232 0.768 35 H 0.072 0.928 36 H 0.088 0.912 37 H 0.073 0.927 38 H 0.107 0.893 39 H 0.046 0.954 40 H 0.091 0.909 41 H 0.063 0.937 42 H 0.058 0.942 43 H 0.050 0.950 Dipole moment (debyes) X Y Z Total from point charges -21.549 13.644 8.057 26.747 hybrid contribution 0.574 0.361 -0.964 1.178 sum -20.974 14.005 7.094 26.199 Atomic orbital electron populations 1.23172 0.77552 1.04647 1.01515 1.86128 1.21927 1.25887 1.87531 1.18730 0.90070 0.85087 0.93568 1.21277 1.00570 0.91865 1.09150 1.20997 0.93706 0.97472 0.95039 1.20931 0.93645 0.97434 1.04989 1.20694 0.86247 0.92777 1.00023 1.98446 1.07741 1.98333 1.96296 1.19101 0.91270 0.93796 1.11429 1.17652 0.79160 0.82841 0.84542 1.90804 1.55028 1.62889 1.31598 1.46054 1.53847 1.27794 1.07689 1.21140 0.91957 0.82576 0.99627 0.89413 1.22092 0.99821 0.98093 1.01412 1.23835 0.96208 1.01414 0.95173 1.22186 0.84551 0.93433 0.94785 1.45994 1.33292 1.02568 1.51935 1.19029 1.04294 0.92999 1.18651 0.90361 1.24769 0.99935 0.95383 1.00351 1.69826 1.44760 0.97622 1.44577 0.86133 0.81608 0.77022 0.81196 1.21735 1.21616 1.20612 1.22521 0.88975 0.92352 0.96116 0.92299 0.92214 0.87704 0.84338 0.84394 0.84139 0.76796 0.92766 0.91211 0.92739 0.89347 0.95437 0.90876 0.93689 0.94170 0.94994 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.15 9.81 101.05 0.99 1.14 16 2 O -0.30 -3.31 9.95 -18.65 -0.19 -3.50 16 3 C 0.17 1.90 6.70 -38.70 -0.26 1.64 16 4 C -0.21 -1.62 9.03 -39.47 -0.36 -1.98 16 5 C -0.05 -0.37 10.03 -39.54 -0.40 -0.77 16 6 C -0.15 -1.31 9.81 -39.59 -0.39 -1.70 16 7 C 0.03 0.36 6.35 -39.08 -0.25 0.11 16 8 Cl -0.04 -0.49 28.04 -51.86 -1.45 -1.95 16 9 C -0.15 -1.99 5.64 -104.82 -0.59 -2.58 16 10 C 0.57 9.15 5.81 -12.50 -0.07 9.07 16 11 O -0.53 -10.35 16.77 5.28 0.09 -10.26 16 12 N -0.70 -10.38 4.95 -54.87 -0.27 -10.65 16 13 C 0.15 2.50 2.29 -67.93 -0.16 2.35 16 14 H 0.09 1.67 7.49 -51.93 -0.39 1.28 16 15 C -0.16 -2.34 9.43 37.16 0.35 -1.99 16 16 C -0.15 -2.73 3.36 -89.70 -0.30 -3.03 16 17 C 0.18 4.20 7.02 -2.98 -0.02 4.17 16 18 N -0.61 -16.08 3.70 -177.91 -0.66 -16.74 16 19 C -0.22 -6.39 10.69 -15.06 -0.16 -6.55 16 20 H 0.08 2.18 7.84 -52.48 -0.41 1.77 16 21 C -0.01 -0.23 5.50 -17.43 -0.10 -0.33 16 22 N -0.92 -27.71 11.43 55.49 0.63 -27.07 16 23 Si 0.91 22.50 29.56 -169.99 -5.02 17.48 16 24 H -0.29 -7.18 7.11 56.52 0.40 -6.78 16 25 H -0.29 -7.18 7.11 56.52 0.40 -6.78 16 26 H -0.28 -6.73 7.11 56.52 0.40 -6.33 16 27 C 0.13 2.66 8.38 -2.98 -0.02 2.63 16 28 H 0.06 0.27 7.66 -51.93 -0.40 -0.13 16 29 H 0.06 0.25 7.66 -51.93 -0.40 -0.15 16 30 H 0.10 0.49 8.14 -51.93 -0.42 0.06 16 31 H 0.14 0.67 6.30 -52.49 -0.33 0.34 16 32 H 0.14 0.51 8.06 -52.49 -0.42 0.09 16 33 H 0.14 0.94 8.06 -52.49 -0.42 0.51 16 34 H 0.40 5.09 8.59 -40.82 -0.35 4.74 16 35 H 0.05 0.74 8.14 -51.93 -0.42 0.32 16 36 H 0.07 1.05 8.14 -51.93 -0.42 0.63 16 37 H 0.05 0.84 8.14 -51.93 -0.42 0.42 16 38 H 0.09 1.58 8.14 -51.93 -0.42 1.16 16 39 H 0.03 0.68 8.04 -51.93 -0.42 0.27 16 40 H 0.07 1.90 7.19 -51.93 -0.37 1.52 16 41 H 0.25 7.37 8.31 -40.82 -0.34 7.03 16 42 H 0.04 0.80 8.14 -51.93 -0.42 0.37 16 43 H 0.03 0.69 8.10 -51.93 -0.42 0.27 16 LS Contribution 377.67 15.07 5.69 5.69 Total: -1.00 -35.29 377.67 -8.91 -44.20 By element: Atomic # 1 Polarization: 6.62 SS G_CDS: -6.00 Total: 0.61 kcal Atomic # 6 Polarization: 3.92 SS G_CDS: -1.73 Total: 2.19 kcal Atomic # 7 Polarization: -54.17 SS G_CDS: -0.30 Total: -54.47 kcal Atomic # 8 Polarization: -13.66 SS G_CDS: -0.10 Total: -13.76 kcal Atomic # 14 Polarization: 22.50 SS G_CDS: -5.02 Total: 17.48 kcal Atomic # 17 Polarization: -0.49 SS G_CDS: -1.45 Total: -1.95 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -35.29 -8.91 -44.20 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000970923921.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.074 kcal (2) G-P(sol) polarization free energy of solvation -35.285 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.788 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.915 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.200 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.874 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds