Wall clock time and date at job start Tue Mar 31 2020 20:41:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35654 * 117.00203 * 2 1 4 4 C 1.38668 * 120.14636 * 0.02562 * 3 2 1 5 5 C 1.38093 * 120.12420 * 179.97438 * 4 3 2 6 6 C 1.38478 * 120.41055 * 0.02562 * 5 4 3 7 7 C 1.37968 * 120.28920 * 0.02562 * 6 5 4 8 8 Cl 1.73599 * 120.06431 * 179.97438 * 7 6 5 9 9 C 1.39839 * 119.86593 * 0.23291 * 7 6 5 10 10 C 1.47461 * 120.19829 * 179.74574 * 9 7 6 11 11 O 1.21607 * 120.00133 * 89.99724 * 10 9 7 12 12 N 1.34771 * 120.00245 * 269.99670 * 10 9 7 13 13 C 1.46506 * 120.00186 * 180.02562 * 12 10 9 14 14 H 1.08993 * 109.47254 * 34.99685 * 13 12 10 15 15 C 1.53004 * 109.46639 * 274.99618 * 13 12 10 16 16 C 1.52996 * 109.46969 * 155.00233 * 13 12 10 17 17 C 1.53950 * 113.74073 * 278.73628 * 16 13 12 18 18 N 1.47808 * 86.03898 * 222.08776 * 17 16 13 19 19 C 1.36939 * 134.45558 * 204.64660 * 18 17 16 20 20 H 1.08008 * 119.99580 * 179.86869 * 19 18 17 21 21 C 1.38803 * 120.00104 * 359.86364 * 19 18 17 22 22 N 1.31622 * 120.00404 * 359.97438 * 21 19 18 23 23 Si 1.86807 * 120.00039 * 180.02562 * 21 19 18 24 24 H 1.48497 * 109.46774 * 359.97438 * 23 21 19 25 25 H 1.48500 * 109.47089 * 119.99824 * 23 21 19 26 26 H 1.48504 * 109.47127 * 239.99920 * 23 21 19 27 27 C 1.47583 * 91.05005 * 24.54785 * 18 17 16 28 28 H 1.08994 * 109.47768 * 180.02562 * 1 2 3 29 29 H 1.09006 * 109.46538 * 300.00010 * 1 2 3 30 30 H 1.09004 * 109.47298 * 59.99453 * 1 2 3 31 31 H 1.08001 * 119.93480 * 359.97438 * 4 3 2 32 32 H 1.07994 * 119.79455 * 180.02562 * 5 4 3 33 33 H 1.08001 * 119.85493 * 179.97438 * 6 5 4 34 34 H 0.96997 * 119.99903 * 0.02562 * 12 10 9 35 35 H 1.08998 * 109.46818 * 60.00717 * 15 13 12 36 36 H 1.09003 * 109.46641 * 179.97438 * 15 13 12 37 37 H 1.08993 * 109.47352 * 300.00007 * 15 13 12 38 38 H 1.09001 * 112.95055 * 50.32670 * 16 13 12 39 39 H 1.09006 * 113.76902 * 336.35289 * 17 16 13 40 40 H 1.09005 * 113.76977 * 107.74804 * 17 16 13 41 41 H 0.96999 * 120.00669 * 179.97438 * 22 21 19 42 42 H 1.09002 * 113.76642 * 221.15027 * 27 18 17 43 43 H 1.08999 * 113.86815 * 89.76919 * 27 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2926 2.3736 0.0005 5 6 1.9201 3.6037 0.0011 6 6 3.3024 3.6855 0.0005 7 6 4.0675 2.5374 -0.0011 8 17 5.8000 2.6467 -0.0024 9 6 3.4444 1.2855 -0.0071 10 6 4.2549 0.0536 -0.0145 11 8 4.5903 -0.4599 1.0356 12 7 4.6241 -0.5032 -1.1850 13 6 5.4289 -1.7273 -1.1923 14 1 5.1368 -2.3592 -0.3537 15 6 6.9100 -1.3646 -1.0660 16 6 5.1985 -2.4812 -2.5036 17 6 3.9147 -3.3309 -2.5127 18 7 4.7288 -4.3687 -3.1799 19 6 4.4481 -5.4216 -4.0092 20 1 5.2475 -6.0499 -4.3736 21 6 3.1364 -5.6814 -4.3815 22 7 2.1622 -4.9161 -3.9369 23 14 2.7535 -7.1182 -5.5123 24 1 4.0142 -7.8175 -5.8681 25 1 1.8409 -8.0633 -4.8201 26 1 2.1011 -6.6154 -6.7480 27 6 5.9649 -3.8132 -2.5956 28 1 -0.3634 -1.0276 0.0005 29 1 -0.3632 0.5139 0.8901 30 1 -0.3634 0.5139 -0.8900 31 1 0.2140 2.3186 0.0005 32 1 1.3290 4.5076 0.0019 33 1 3.7838 4.6523 0.0005 34 1 4.3569 -0.0934 -2.0226 35 1 7.0741 -0.8276 -0.1319 36 1 7.5087 -2.2755 -1.0710 37 1 7.2021 -0.7328 -1.9047 38 1 5.3118 -1.8480 -3.3835 39 1 3.5690 -3.6153 -1.5188 40 1 3.1219 -2.9224 -3.1394 41 1 1.2456 -5.0974 -4.1973 42 1 6.8061 -3.7891 -3.2885 43 1 6.2245 -4.2386 -1.6262 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000970923922.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:41:57 Heat of formation + Delta-G solvation = 2.638885 kcal Electronic energy + Delta-G solvation = -27197.010111 eV Core-core repulsion = 23270.516737 eV Total energy + Delta-G solvation = -3926.493374 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 338.118 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -40.75500 -39.28866 -38.08202 -37.63754 -36.50409 -34.65604 -32.29889 -31.71252 -30.40514 -29.93507 -27.56022 -27.46200 -25.01717 -24.28479 -23.60003 -22.48052 -21.39396 -20.30946 -19.29615 -18.40029 -17.29062 -16.81414 -16.66632 -16.23452 -15.79515 -15.54904 -15.22050 -14.84935 -14.54173 -14.10182 -13.83224 -13.79296 -13.56580 -13.35629 -12.89149 -12.66070 -12.38124 -12.19406 -12.07552 -11.96896 -11.60789 -11.56986 -11.27599 -11.23444 -11.22417 -11.14995 -10.88494 -10.68916 -10.29112 -9.97017 -9.69825 -9.64780 -9.34578 -9.14514 -8.76247 -8.69620 -8.57863 -6.82395 -5.72764 -3.04586 0.64965 0.94868 1.74023 2.75862 3.04802 3.13918 3.40132 3.42188 3.45901 3.48189 4.39890 4.48354 4.60415 4.74295 4.78995 4.94715 4.98336 5.00666 5.15278 5.27588 5.35074 5.37723 5.41622 5.59293 5.73298 5.75744 5.77327 5.89335 5.93415 6.02883 6.11631 6.14002 6.32853 6.43584 6.49158 6.66135 6.74069 6.88841 7.03092 7.30148 7.43455 7.61555 7.74675 8.02342 8.42013 9.08733 9.74979 10.65272 11.44311 Molecular weight = 338.12amu Principal moments of inertia in cm(-1) A = 0.013924 B = 0.003274 C = 0.002794 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2010.410685 B = 8550.835036 C =10019.980662 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.298 6.298 3 C 0.178 3.822 4 C -0.209 4.209 5 C -0.053 4.053 6 C -0.154 4.154 7 C 0.031 3.969 8 Cl -0.047 7.047 9 C -0.153 4.153 10 C 0.576 3.424 11 O -0.529 6.529 12 N -0.703 5.703 13 C 0.152 3.848 14 H 0.088 0.912 15 C -0.158 4.158 16 C -0.146 4.146 17 C 0.173 3.827 18 N -0.614 5.614 19 C -0.220 4.220 20 H 0.080 0.920 21 C -0.009 4.009 22 N -0.921 5.921 23 Si 0.910 3.090 24 H -0.280 1.280 25 H -0.291 1.291 26 H -0.291 1.291 27 C 0.130 3.870 28 H 0.108 0.892 29 H 0.057 0.943 30 H 0.060 0.940 31 H 0.140 0.860 32 H 0.138 0.862 33 H 0.139 0.861 34 H 0.400 0.600 35 H 0.054 0.946 36 H 0.067 0.933 37 H 0.054 0.946 38 H 0.087 0.913 39 H 0.026 0.974 40 H 0.071 0.929 41 H 0.252 0.748 42 H 0.044 0.956 43 H 0.035 0.965 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.784 20.855 7.823 22.288 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.209 6.209 3 C 0.130 3.870 4 C -0.228 4.228 5 C -0.072 4.072 6 C -0.173 4.173 7 C 0.004 3.996 8 Cl -0.018 7.018 9 C -0.158 4.158 10 C 0.360 3.640 11 O -0.405 6.405 12 N -0.353 5.353 13 C 0.047 3.953 14 H 0.106 0.894 15 C -0.216 4.216 16 C -0.166 4.166 17 C 0.047 3.953 18 N -0.340 5.340 19 C -0.348 4.348 20 H 0.097 0.903 21 C -0.205 4.205 22 N -0.568 5.568 23 Si 0.741 3.259 24 H -0.205 1.205 25 H -0.218 1.218 26 H -0.218 1.218 27 C 0.004 3.996 28 H 0.127 0.873 29 H 0.076 0.924 30 H 0.079 0.921 31 H 0.158 0.842 32 H 0.156 0.844 33 H 0.157 0.843 34 H 0.233 0.767 35 H 0.073 0.927 36 H 0.085 0.915 37 H 0.073 0.927 38 H 0.106 0.894 39 H 0.044 0.956 40 H 0.089 0.911 41 H 0.062 0.938 42 H 0.062 0.938 43 H 0.053 0.947 Dipole moment (debyes) X Y Z Total from point charges -0.497 20.021 8.376 21.708 hybrid contribution -0.639 -0.471 -0.923 1.218 sum -1.136 19.550 7.453 20.953 Atomic orbital electron populations 1.23212 0.77236 1.05105 1.01303 1.86186 1.22200 1.25487 1.87046 1.18795 0.90135 0.85346 0.92735 1.21318 1.00751 0.91835 1.08890 1.20985 0.93661 0.97474 0.95033 1.20878 0.93649 0.97266 1.05518 1.20600 0.85557 0.92806 1.00683 1.98408 1.08579 1.98350 1.96464 1.19072 0.91362 0.93681 1.11673 1.17638 0.78899 0.82977 0.84486 1.90795 1.55520 1.62621 1.31574 1.46009 1.53814 1.27619 1.07811 1.21111 0.89883 0.84633 0.99638 0.89426 1.22126 0.96047 1.01909 1.01526 1.23806 1.01841 0.95867 0.95086 1.22277 0.92329 0.85426 0.95234 1.46017 1.02027 1.33353 1.52560 1.19081 0.92543 1.04104 1.19067 0.90270 1.24765 0.95436 0.99432 1.00888 1.69839 0.99012 1.39781 1.48204 0.86073 0.77945 0.81840 0.80081 1.20485 1.21799 1.21771 1.22487 0.91417 0.89690 0.96019 0.87322 0.92424 0.92097 0.84209 0.84414 0.84273 0.76659 0.92730 0.91454 0.92720 0.89445 0.95579 0.91100 0.93836 0.93800 0.94744 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.24 9.81 101.05 0.99 1.23 16 2 O -0.30 -4.13 9.94 -18.66 -0.19 -4.32 16 3 C 0.18 2.26 6.70 -38.70 -0.26 2.00 16 4 C -0.21 -1.90 9.03 -39.48 -0.36 -2.26 16 5 C -0.05 -0.41 10.03 -39.55 -0.40 -0.80 16 6 C -0.15 -1.37 9.81 -39.59 -0.39 -1.76 16 7 C 0.03 0.37 6.35 -39.08 -0.25 0.12 16 8 Cl -0.05 -0.56 28.04 -51.86 -1.45 -2.01 16 9 C -0.15 -2.15 5.64 -104.82 -0.59 -2.74 16 10 C 0.58 9.58 5.81 -12.51 -0.07 9.51 16 11 O -0.53 -10.63 16.77 5.27 0.09 -10.54 16 12 N -0.70 -10.87 5.07 -54.87 -0.28 -11.15 16 13 C 0.15 2.52 2.38 -67.93 -0.16 2.35 16 14 H 0.09 1.67 7.41 -51.93 -0.39 1.29 16 15 C -0.16 -2.26 9.31 37.16 0.35 -1.92 16 16 C -0.15 -2.72 3.47 -89.69 -0.31 -3.03 16 17 C 0.17 4.13 7.08 -2.84 -0.02 4.11 16 18 N -0.61 -16.03 3.70 -177.68 -0.66 -16.68 16 19 C -0.22 -6.29 10.70 -15.06 -0.16 -6.45 16 20 H 0.08 2.18 7.83 -52.48 -0.41 1.77 16 21 C -0.01 -0.26 5.50 -17.43 -0.10 -0.35 16 22 N -0.92 -27.52 11.39 55.49 0.63 -26.89 16 23 Si 0.91 22.35 29.55 -169.99 -5.02 17.32 16 24 H -0.28 -6.65 7.11 56.52 0.40 -6.25 16 25 H -0.29 -7.19 7.11 56.52 0.40 -6.79 16 26 H -0.29 -7.13 7.11 56.52 0.40 -6.73 16 27 C 0.13 2.69 7.64 -2.97 -0.02 2.67 16 28 H 0.11 0.96 8.14 -51.93 -0.42 0.54 16 29 H 0.06 0.40 7.66 -51.93 -0.40 0.01 16 30 H 0.06 0.45 7.66 -51.93 -0.40 0.05 16 31 H 0.14 0.91 6.30 -52.49 -0.33 0.58 16 32 H 0.14 0.61 8.06 -52.49 -0.42 0.18 16 33 H 0.14 0.91 8.06 -52.49 -0.42 0.49 16 34 H 0.40 5.50 8.59 -40.82 -0.35 5.15 16 35 H 0.05 0.81 8.14 -51.93 -0.42 0.39 16 36 H 0.07 0.92 7.52 -51.93 -0.39 0.53 16 37 H 0.05 0.71 8.14 -51.93 -0.42 0.29 16 38 H 0.09 1.56 8.14 -51.93 -0.42 1.14 16 39 H 0.03 0.67 7.99 -51.93 -0.41 0.25 16 40 H 0.07 1.86 7.17 -51.93 -0.37 1.49 16 41 H 0.25 7.26 8.31 -40.82 -0.34 6.92 16 42 H 0.04 0.85 8.14 -51.93 -0.42 0.43 16 43 H 0.04 0.70 8.10 -51.93 -0.42 0.28 16 LS Contribution 376.40 15.07 5.67 5.67 Total: -1.00 -35.02 376.40 -8.92 -43.94 By element: Atomic # 1 Polarization: 7.96 SS G_CDS: -5.96 Total: 1.99 kcal Atomic # 6 Polarization: 4.42 SS G_CDS: -1.75 Total: 2.67 kcal Atomic # 7 Polarization: -54.42 SS G_CDS: -0.30 Total: -54.73 kcal Atomic # 8 Polarization: -14.77 SS G_CDS: -0.10 Total: -14.86 kcal Atomic # 14 Polarization: 22.35 SS G_CDS: -5.02 Total: 17.32 kcal Atomic # 17 Polarization: -0.56 SS G_CDS: -1.45 Total: -2.01 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -35.02 -8.92 -43.94 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000970923922.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 46.581 kcal (2) G-P(sol) polarization free energy of solvation -35.022 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.559 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.920 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.942 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.639 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds