Wall clock time and date at job start Tue Mar 31 2020 20:30:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 O 1.21280 * 119.99583 * 2 1 4 4 N 1.34778 * 119.99783 * 180.02562 * 2 1 3 5 5 C 1.46500 * 119.99565 * 184.63311 * 4 2 1 6 6 H 1.08999 * 109.46668 * 182.17347 * 5 4 2 7 7 C 1.53001 * 109.47325 * 62.17024 * 5 4 2 8 8 C 1.50697 * 109.47050 * 65.00051 * 7 5 4 9 9 O 1.21283 * 120.00171 * 359.97438 * 8 7 5 10 10 N 1.34778 * 119.99779 * 179.97438 * 8 7 5 11 11 C 1.46502 * 119.99813 * 0.02562 * 10 8 7 12 12 C 1.46499 * 119.99852 * 179.97438 * 10 8 7 13 13 C 1.50700 * 109.47034 * 90.00228 * 12 10 8 14 14 H 1.08000 * 119.99840 * 359.97438 * 13 12 10 15 15 C 1.37877 * 120.00101 * 179.97438 * 13 12 10 16 16 N 1.31513 * 119.99877 * 359.97438 * 15 13 12 17 17 Si 1.86800 * 120.00321 * 179.97438 * 15 13 12 18 18 H 1.48501 * 109.46834 * 0.02562 * 17 15 13 19 19 H 1.48504 * 109.46835 * 119.99791 * 17 15 13 20 20 H 1.48500 * 109.47334 * 240.00282 * 17 15 13 21 21 C 1.50705 * 109.46779 * 302.16610 * 5 4 2 22 22 C 1.38244 * 119.97989 * 140.24879 * 21 5 4 23 23 C 1.38217 * 120.00836 * 179.97438 * 22 21 5 24 24 C 1.38352 * 119.98716 * 0.02562 * 23 22 21 25 25 Cl 1.73602 * 120.01170 * 180.02562 * 24 23 22 26 26 C 1.38351 * 119.97301 * 0.27999 * 24 23 22 27 27 C 1.38210 * 119.98706 * 359.40410 * 26 24 23 28 28 H 1.08999 * 109.47222 * 180.02562 * 1 2 3 29 29 H 1.09002 * 109.47038 * 300.00013 * 1 2 3 30 30 H 1.08992 * 109.47163 * 60.00123 * 1 2 3 31 31 H 0.96995 * 120.00148 * 4.62487 * 4 2 1 32 32 H 1.08998 * 109.46598 * 185.00047 * 7 5 4 33 33 H 1.09000 * 109.47026 * 304.99983 * 7 5 4 34 34 H 1.08993 * 109.47188 * 90.00089 * 11 10 8 35 35 H 1.09006 * 109.46634 * 209.99846 * 11 10 8 36 36 H 1.08994 * 109.47025 * 329.99600 * 11 10 8 37 37 H 1.08999 * 109.47079 * 209.99942 * 12 10 8 38 38 H 1.09000 * 109.47416 * 330.00194 * 12 10 8 39 39 H 0.97003 * 120.00346 * 179.97438 * 16 15 13 40 40 H 1.08002 * 119.99646 * 359.97438 * 22 21 5 41 41 H 1.08003 * 120.00571 * 180.02562 * 23 22 21 42 42 H 1.08000 * 120.00223 * 179.72425 * 26 24 23 43 43 H 1.08004 * 119.99490 * 180.32444 * 27 26 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 8 2.1134 1.0504 0.0000 4 7 2.1809 -1.1672 -0.0005 5 6 3.6423 -1.1693 0.1020 6 1 4.0089 -2.1943 0.0466 7 6 4.0609 -0.5492 1.4366 8 6 3.5807 -1.4211 2.5681 9 8 2.9640 -2.4380 2.3305 10 7 3.8366 -1.0707 3.8441 11 6 4.5812 0.1579 4.1311 12 6 3.3693 -1.9180 4.9441 13 6 4.4277 -2.9378 5.2772 14 1 5.3554 -2.9535 4.7244 15 6 4.2116 -3.8508 6.2875 16 7 3.0821 -3.8313 6.9609 17 14 5.5231 -5.1154 6.7000 18 1 6.6918 -4.9269 5.8034 19 1 5.9501 -4.9433 8.1119 20 1 4.9703 -6.4809 6.5129 21 6 4.2264 -0.3651 -1.0309 22 6 5.3126 0.4595 -0.8044 23 6 5.8491 1.1970 -1.8430 24 6 5.2985 1.1101 -3.1093 25 17 5.9722 2.0356 -4.4145 26 6 4.2075 0.2895 -3.3338 27 6 3.6760 -0.4524 -2.2959 28 1 -0.3633 -1.0276 0.0005 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8899 31 1 1.6983 -2.0058 -0.0686 32 1 5.1473 -0.4694 1.4752 33 1 3.6201 0.4432 1.5303 34 1 3.8841 0.9894 4.2345 35 1 5.1407 0.0354 5.0585 36 1 5.2727 0.3629 3.3139 37 1 3.1718 -1.3000 5.8200 38 1 2.4538 -2.4287 4.6458 39 1 2.9299 -4.4738 7.6715 40 1 5.7421 0.5275 0.1842 41 1 6.6980 1.8409 -1.6662 42 1 3.7745 0.2248 -4.3211 43 1 2.8275 -1.0971 -2.4722 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000067509399.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:30:29 Heat of formation + Delta-G solvation = -51.016807 kcal Electronic energy + Delta-G solvation = -27199.931005 eV Core-core repulsion = 23271.110946 eV Total energy + Delta-G solvation = -3928.820059 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 338.118 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -40.62497 -38.91568 -38.65043 -36.69173 -35.27816 -34.60569 -32.72661 -32.22433 -31.18996 -29.74857 -29.18925 -27.55831 -25.80563 -24.57226 -23.10143 -22.37951 -21.57876 -19.91859 -18.35728 -17.59445 -17.38659 -16.55658 -16.29110 -15.99599 -15.60932 -15.22853 -15.01431 -14.91425 -14.50365 -14.20833 -13.76214 -13.68432 -13.63122 -13.43803 -12.78358 -12.64080 -12.45404 -12.27541 -12.20321 -12.16510 -11.87005 -11.74604 -11.62053 -11.40967 -11.23683 -11.18937 -10.92295 -10.87980 -10.61631 -10.19246 -9.79679 -9.63920 -9.17127 -9.10678 -8.91885 -8.58326 -8.47383 -7.66417 -6.07861 -4.12707 1.00934 1.18336 1.97581 2.70337 3.23672 3.26807 3.33914 3.36968 3.43438 3.56993 3.91492 4.40599 4.59332 4.60677 4.73081 4.86163 5.00864 5.12784 5.17055 5.19691 5.26848 5.33722 5.37222 5.46486 5.46642 5.59059 5.73909 5.80060 5.80610 5.91714 5.99839 6.07787 6.10031 6.20329 6.31439 6.57111 6.65805 7.02672 7.40250 7.50984 7.60659 7.88547 8.19904 8.30113 8.39309 8.86612 9.05805 9.52661 11.00180 Molecular weight = 338.12amu Principal moments of inertia in cm(-1) A = 0.015935 B = 0.002799 C = 0.002573 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1756.670051 B =10001.988224 C =10880.998536 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C 0.510 3.490 3 O -0.541 6.541 4 N -0.711 5.711 5 C 0.205 3.795 6 H 0.111 0.889 7 C -0.162 4.162 8 C 0.508 3.492 9 O -0.544 6.544 10 N -0.602 5.602 11 C 0.083 3.917 12 C 0.246 3.754 13 C -0.524 4.524 14 H 0.057 0.943 15 C 0.060 3.940 16 N -0.895 5.895 17 Si 0.898 3.102 18 H -0.273 1.273 19 H -0.284 1.284 20 H -0.283 1.283 21 C -0.066 4.066 22 C -0.096 4.096 23 C -0.107 4.107 24 C -0.039 4.039 25 Cl -0.081 7.081 26 C -0.109 4.109 27 C -0.094 4.094 28 H 0.076 0.924 29 H 0.093 0.907 30 H 0.089 0.911 31 H 0.408 0.592 32 H 0.097 0.903 33 H 0.107 0.893 34 H 0.044 0.956 35 H 0.074 0.926 36 H 0.056 0.944 37 H 0.031 0.969 38 H 0.043 0.957 39 H 0.263 0.737 40 H 0.135 0.865 41 H 0.132 0.868 42 H 0.129 0.871 43 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.571 9.935 -19.155 21.585 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.231 4.231 2 C 0.298 3.702 3 O -0.419 6.419 4 N -0.362 5.362 5 C 0.099 3.901 6 H 0.129 0.871 7 C -0.202 4.202 8 C 0.295 3.705 9 O -0.423 6.423 10 N -0.334 5.334 11 C -0.061 4.061 12 C 0.126 3.874 13 C -0.563 4.563 14 H 0.075 0.925 15 C -0.142 4.142 16 N -0.534 5.534 17 Si 0.726 3.274 18 H -0.198 1.198 19 H -0.210 1.210 20 H -0.209 1.209 21 C -0.067 4.067 22 C -0.114 4.114 23 C -0.126 4.126 24 C -0.066 4.066 25 Cl -0.052 7.052 26 C -0.128 4.128 27 C -0.113 4.113 28 H 0.095 0.905 29 H 0.112 0.888 30 H 0.108 0.892 31 H 0.243 0.757 32 H 0.115 0.885 33 H 0.125 0.875 34 H 0.063 0.937 35 H 0.092 0.908 36 H 0.075 0.925 37 H 0.049 0.951 38 H 0.061 0.939 39 H 0.072 0.928 40 H 0.153 0.847 41 H 0.150 0.850 42 H 0.147 0.853 43 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 0.624 10.140 -19.187 21.710 hybrid contribution 0.572 -0.941 0.331 1.150 sum 1.196 9.199 -18.856 21.014 Atomic orbital electron populations 1.21843 0.92155 1.04253 1.04895 1.20772 0.90508 0.83667 0.75292 1.90697 1.70442 1.31285 1.49434 1.45986 1.06546 1.09163 1.74508 1.19466 0.80397 0.99556 0.90657 0.87083 1.22275 1.02795 1.01866 0.93290 1.20174 0.80619 0.85962 0.83759 1.90617 1.41662 1.26160 1.83854 1.48134 1.54306 1.23922 1.07005 1.21641 0.95739 0.86747 1.01964 1.19275 0.96117 0.89079 0.82894 1.21458 1.02442 1.15229 1.17208 0.92451 1.24943 0.95748 0.97470 0.96002 1.69942 1.23971 1.36788 1.22703 0.86447 0.81639 0.81338 0.78015 1.19799 1.20965 1.20879 1.20144 0.95317 0.96672 0.94544 1.21076 0.96001 0.95325 0.99031 1.21003 1.00493 1.00108 0.90946 1.20886 0.97810 0.98365 0.89518 1.98357 1.84932 1.72890 1.49009 1.20941 0.95390 0.96568 0.99911 1.20805 0.99599 0.99093 0.91755 0.90533 0.88830 0.89188 0.75675 0.88474 0.87521 0.93743 0.90756 0.92506 0.95149 0.93908 0.92768 0.84696 0.85048 0.85309 0.85510 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.60 10.39 36.01 0.37 -1.22 16 2 C 0.51 6.48 6.97 -10.98 -0.08 6.41 16 3 O -0.54 -8.54 14.38 5.56 0.08 -8.46 16 4 N -0.71 -8.52 3.72 -54.93 -0.20 -8.72 16 5 C 0.20 2.61 2.56 -69.08 -0.18 2.44 16 6 H 0.11 1.42 7.96 -51.93 -0.41 1.01 16 7 C -0.16 -2.33 2.82 -27.88 -0.08 -2.41 16 8 C 0.51 9.89 7.53 -10.99 -0.08 9.81 16 9 O -0.54 -12.22 14.93 5.56 0.08 -12.13 16 10 N -0.60 -12.48 2.86 -182.96 -0.52 -13.00 16 11 C 0.08 1.33 10.24 59.85 0.61 1.94 16 12 C 0.25 6.32 5.16 -5.19 -0.03 6.29 16 13 C -0.52 -14.60 9.39 -34.44 -0.32 -14.92 16 14 H 0.06 1.60 7.81 -52.49 -0.41 1.19 16 15 C 0.06 1.70 5.46 -17.82 -0.10 1.60 16 16 N -0.89 -26.27 13.29 55.43 0.74 -25.53 16 17 Si 0.90 21.52 29.54 -169.99 -5.02 16.50 16 18 H -0.27 -6.45 7.11 56.52 0.40 -6.05 16 19 H -0.28 -6.65 7.11 56.52 0.40 -6.25 16 20 H -0.28 -6.77 7.11 56.52 0.40 -6.37 16 21 C -0.07 -0.77 4.03 -104.62 -0.42 -1.20 16 22 C -0.10 -1.08 9.11 -39.59 -0.36 -1.44 16 23 C -0.11 -1.15 9.83 -39.55 -0.39 -1.54 16 24 C -0.04 -0.43 6.32 -39.50 -0.25 -0.68 16 25 Cl -0.08 -0.81 28.96 -51.86 -1.50 -2.31 16 26 C -0.11 -1.15 9.83 -39.55 -0.39 -1.54 16 27 C -0.09 -1.02 8.93 -39.59 -0.35 -1.38 16 28 H 0.08 0.58 7.92 -51.93 -0.41 0.16 16 29 H 0.09 0.90 8.14 -51.93 -0.42 0.47 16 30 H 0.09 0.71 8.14 -51.93 -0.42 0.28 16 31 H 0.41 4.28 8.67 -40.82 -0.35 3.93 16 32 H 0.10 1.20 5.60 -51.93 -0.29 0.91 16 33 H 0.11 1.61 6.34 -51.93 -0.33 1.28 16 34 H 0.04 0.64 8.14 -51.93 -0.42 0.22 16 35 H 0.07 1.21 8.07 -51.93 -0.42 0.79 16 36 H 0.06 0.73 6.44 -51.93 -0.33 0.40 16 37 H 0.03 0.80 8.07 -51.93 -0.42 0.38 16 38 H 0.04 1.23 7.42 -51.93 -0.39 0.85 16 39 H 0.26 7.26 8.31 -40.82 -0.34 6.92 16 40 H 0.14 1.35 5.86 -52.49 -0.31 1.04 16 41 H 0.13 1.18 8.06 -52.48 -0.42 0.76 16 42 H 0.13 1.12 8.06 -52.49 -0.42 0.70 16 43 H 0.13 1.19 7.71 -52.48 -0.40 0.78 16 LS Contribution 374.31 15.07 5.64 5.64 Total: -1.00 -33.99 374.31 -8.48 -42.47 By element: Atomic # 1 Polarization: 9.12 SS G_CDS: -5.73 Total: 3.40 kcal Atomic # 6 Polarization: 4.20 SS G_CDS: -2.04 Total: 2.16 kcal Atomic # 7 Polarization: -47.26 SS G_CDS: 0.01 Total: -47.25 kcal Atomic # 8 Polarization: -20.76 SS G_CDS: 0.16 Total: -20.60 kcal Atomic # 14 Polarization: 21.52 SS G_CDS: -5.02 Total: 16.50 kcal Atomic # 17 Polarization: -0.81 SS G_CDS: -1.50 Total: -2.31 kcal Total LS contribution 5.64 Total: 5.64 kcal Total: -33.99 -8.48 -42.47 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000067509399.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.550 kcal (2) G-P(sol) polarization free energy of solvation -33.990 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.541 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.476 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.466 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.017 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds