Wall clock time and date at job start Tue Mar 31 2020 20:30:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 O 1.21280 * 119.99583 * 2 1 4 4 N 1.34778 * 119.99783 * 180.02562 * 2 1 3 5 5 C 1.46498 * 119.99568 * 184.62680 * 4 2 1 6 6 H 1.09003 * 109.46853 * 182.20297 * 5 4 2 7 7 C 1.53000 * 109.47522 * 62.20171 * 5 4 2 8 8 C 1.50697 * 109.47014 * 64.99584 * 7 5 4 9 9 O 1.21278 * 120.00163 * 0.02562 * 8 7 5 10 10 N 1.34782 * 119.99610 * 179.97438 * 8 7 5 11 11 C 1.46499 * 119.99568 * 180.02562 * 10 8 7 12 12 C 1.53001 * 109.46939 * 180.02562 * 11 10 8 13 13 C 1.50698 * 109.47305 * 180.02562 * 12 11 10 14 14 H 1.08001 * 119.99859 * 359.97438 * 13 12 11 15 15 C 1.37875 * 120.00274 * 179.97438 * 13 12 11 16 16 N 1.31520 * 119.99747 * 0.02562 * 15 13 12 17 17 Si 1.86801 * 120.00210 * 179.97438 * 15 13 12 18 18 H 1.48496 * 109.47154 * 59.99847 * 17 15 13 19 19 H 1.48501 * 109.47317 * 180.02562 * 17 15 13 20 20 H 1.48503 * 109.46995 * 299.99875 * 17 15 13 21 21 C 1.50702 * 109.46837 * 302.19844 * 5 4 2 22 22 C 1.38239 * 119.98492 * 140.24422 * 21 5 4 23 23 C 1.38214 * 120.01664 * 179.97438 * 22 21 5 24 24 C 1.38356 * 119.98214 * 0.02562 * 23 22 21 25 25 Cl 1.73598 * 120.01255 * 179.97438 * 24 23 22 26 26 C 1.38352 * 119.97587 * 0.27654 * 24 23 22 27 27 C 1.38217 * 119.98324 * 359.39924 * 26 24 23 28 28 H 1.09006 * 109.46646 * 270.00113 * 1 2 3 29 29 H 1.08992 * 109.47421 * 30.00059 * 1 2 3 30 30 H 1.09000 * 109.47012 * 150.00765 * 1 2 3 31 31 H 0.97001 * 120.00144 * 4.61961 * 4 2 1 32 32 H 1.09002 * 109.46815 * 185.00244 * 7 5 4 33 33 H 1.08998 * 109.46802 * 304.99845 * 7 5 4 34 34 H 0.96997 * 119.99850 * 0.02562 * 10 8 7 35 35 H 1.08998 * 109.47136 * 300.00015 * 11 10 8 36 36 H 1.08998 * 109.47414 * 60.00490 * 11 10 8 37 37 H 1.09004 * 109.47171 * 299.99775 * 12 11 10 38 38 H 1.08998 * 109.47139 * 59.99744 * 12 11 10 39 39 H 0.97001 * 119.99602 * 180.02562 * 16 15 13 40 40 H 1.08002 * 119.99445 * 0.02562 * 22 21 5 41 41 H 1.07999 * 120.01150 * 180.02562 * 23 22 21 42 42 H 1.07993 * 120.01014 * 179.72471 * 26 24 23 43 43 H 1.08002 * 119.99429 * 180.32369 * 27 26 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 8 2.1134 1.0504 0.0000 4 7 2.1809 -1.1672 -0.0005 5 6 3.6423 -1.1693 0.1018 6 1 4.0090 -2.1943 0.0460 7 6 4.0611 -0.5499 1.4367 8 6 3.5809 -1.4222 2.5678 9 8 2.9649 -2.4395 2.3298 10 7 3.8370 -1.0725 3.8440 11 6 3.3707 -1.9208 4.9436 12 6 3.7894 -1.3013 6.2785 13 6 3.3103 -2.1743 7.4096 14 1 2.7617 -3.0801 7.1976 15 6 3.5723 -1.8166 8.7151 16 7 4.2400 -0.7132 8.9733 17 14 2.9779 -2.8983 10.1173 18 1 3.5783 -4.2503 9.9883 19 1 3.3843 -2.2971 11.4129 20 1 1.4977 -3.0070 10.0653 21 6 4.2263 -0.3645 -1.0306 22 6 5.3124 0.4601 -0.8039 23 6 5.8488 1.1981 -1.8422 24 6 5.2981 1.1118 -3.1085 25 17 5.9708 2.0389 -4.4129 26 6 4.2072 0.2911 -3.3334 27 6 3.6759 -0.4515 -2.2958 28 1 -0.3633 0.0000 1.0278 29 1 -0.3634 0.8899 -0.5138 30 1 -0.3633 -0.8901 -0.5137 31 1 1.6983 -2.0059 -0.0686 32 1 5.1475 -0.4700 1.4752 33 1 3.6202 0.4425 1.5309 34 1 4.3300 -0.2591 4.0343 35 1 2.2843 -2.0007 4.9054 36 1 3.8116 -2.9132 4.8491 37 1 4.8758 -1.2211 6.3170 38 1 3.3482 -0.3091 6.3728 39 1 4.4246 -0.4618 9.8918 40 1 5.7424 0.5271 0.1845 41 1 6.6976 1.8420 -1.6651 42 1 3.7741 0.2267 -4.3206 43 1 2.8275 -1.0962 -2.4723 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000273025387.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:30:35 Heat of formation + Delta-G solvation = -68.339189 kcal Electronic energy + Delta-G solvation = -26290.607761 eV Core-core repulsion = 22361.036547 eV Total energy + Delta-G solvation = -3929.571214 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 338.118 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -40.79640 -39.10899 -38.86717 -36.78744 -35.41805 -34.71623 -32.91551 -32.45101 -31.30275 -30.24967 -29.64737 -28.68635 -25.28677 -24.15685 -22.99329 -21.83127 -21.07447 -20.42735 -19.57765 -17.80259 -17.60278 -16.67226 -16.45361 -16.03704 -15.77290 -15.40005 -15.11164 -14.94909 -14.72956 -14.49230 -13.98612 -13.91392 -13.76172 -13.58811 -13.25202 -12.97655 -12.71379 -12.52715 -12.33793 -12.29823 -11.98607 -11.73060 -11.56373 -11.41211 -11.25110 -11.04980 -11.01527 -10.68972 -10.35911 -9.96722 -9.82672 -9.51215 -9.33378 -9.25157 -9.19792 -8.71441 -8.57956 -8.39100 -6.12068 -4.15381 0.89121 1.07420 1.89170 2.55770 2.94797 3.07982 3.28521 3.32742 3.34871 3.42179 3.63149 4.37329 4.46631 4.47565 4.62627 4.66863 4.83106 4.96529 5.05952 5.07054 5.19291 5.24744 5.25859 5.30650 5.36630 5.48531 5.67829 5.69557 5.75268 5.96093 5.98961 6.15919 6.29504 6.29636 6.40139 6.54364 6.68671 6.87041 7.42683 7.47761 7.57881 7.85396 7.96360 8.14408 8.24012 8.58847 8.90317 9.49519 10.99408 Molecular weight = 338.12amu Principal moments of inertia in cm(-1) A = 0.019705 B = 0.002106 C = 0.001988 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1420.606586 B =13294.812274 C =14082.505094 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C 0.510 3.490 3 O -0.537 6.537 4 N -0.714 5.714 5 C 0.207 3.793 6 H 0.111 0.889 7 C -0.165 4.165 8 C 0.509 3.491 9 O -0.553 6.553 10 N -0.722 5.722 11 C 0.123 3.877 12 C 0.012 3.988 13 C -0.523 4.523 14 H 0.058 0.942 15 C 0.059 3.941 16 N -0.894 5.894 17 Si 0.898 3.102 18 H -0.276 1.276 19 H -0.287 1.287 20 H -0.276 1.276 21 C -0.070 4.070 22 C -0.096 4.096 23 C -0.106 4.106 24 C -0.038 4.038 25 Cl -0.078 7.078 26 C -0.109 4.109 27 C -0.093 4.093 28 H 0.094 0.906 29 H 0.090 0.910 30 H 0.077 0.923 31 H 0.408 0.592 32 H 0.103 0.897 33 H 0.112 0.888 34 H 0.398 0.602 35 H 0.054 0.946 36 H 0.056 0.944 37 H 0.022 0.978 38 H 0.022 0.978 39 H 0.263 0.737 40 H 0.136 0.864 41 H 0.133 0.867 42 H 0.130 0.870 43 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.574 2.542 -26.005 26.135 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.233 4.233 2 C 0.297 3.703 3 O -0.414 6.414 4 N -0.366 5.366 5 C 0.102 3.898 6 H 0.129 0.871 7 C -0.206 4.206 8 C 0.295 3.705 9 O -0.432 6.432 10 N -0.371 5.371 11 C 0.001 3.999 12 C -0.025 4.025 13 C -0.562 4.562 14 H 0.077 0.923 15 C -0.143 4.143 16 N -0.532 5.532 17 Si 0.725 3.275 18 H -0.201 1.201 19 H -0.212 1.212 20 H -0.201 1.201 21 C -0.071 4.071 22 C -0.114 4.114 23 C -0.125 4.125 24 C -0.064 4.064 25 Cl -0.050 7.050 26 C -0.128 4.128 27 C -0.112 4.112 28 H 0.113 0.887 29 H 0.109 0.891 30 H 0.096 0.904 31 H 0.243 0.757 32 H 0.121 0.879 33 H 0.130 0.870 34 H 0.231 0.769 35 H 0.073 0.927 36 H 0.074 0.926 37 H 0.040 0.960 38 H 0.040 0.960 39 H 0.072 0.928 40 H 0.154 0.846 41 H 0.151 0.849 42 H 0.148 0.852 43 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -0.473 2.752 -26.089 26.238 hybrid contribution -0.221 -0.365 0.902 0.998 sum -0.694 2.387 -25.187 25.309 Atomic orbital electron populations 1.21886 0.91981 1.04471 1.04976 1.20809 0.90586 0.83626 0.75269 1.90716 1.70465 1.31254 1.48973 1.45963 1.06439 1.09203 1.74981 1.19411 0.80485 0.99449 0.90468 0.87120 1.22273 1.03337 1.01959 0.93046 1.20416 0.79926 0.86066 0.84125 1.90624 1.41578 1.26504 1.84531 1.46346 1.57099 1.27588 1.06111 1.21700 0.98530 0.93513 0.86196 1.19318 0.97264 0.96690 0.89226 1.21000 1.36185 1.08340 0.90649 0.92345 1.25005 0.95026 0.95261 0.99017 1.69947 1.39893 1.23339 1.20036 0.86566 0.79266 0.80599 0.81062 1.20103 1.21221 1.20120 1.20097 0.95517 0.96998 0.94511 1.21072 0.95973 0.95320 0.99071 1.21022 1.00520 1.00029 0.90932 1.20910 0.97716 0.98191 0.89614 1.98364 1.84925 1.72724 1.48949 1.20957 0.95359 0.96518 0.99970 1.20793 0.99532 0.99089 0.91743 0.88727 0.89134 0.90360 0.75718 0.87921 0.87015 0.76868 0.92723 0.92599 0.95961 0.95985 0.92751 0.84634 0.84946 0.85242 0.85522 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.37 10.31 36.01 0.37 -1.00 16 2 C 0.51 5.63 6.97 -10.98 -0.08 5.55 16 3 O -0.54 -7.76 14.38 5.56 0.08 -7.68 16 4 N -0.71 -6.91 3.72 -54.93 -0.20 -7.12 16 5 C 0.21 2.11 2.56 -69.08 -0.18 1.93 16 6 H 0.11 1.07 7.95 -51.93 -0.41 0.66 16 7 C -0.17 -1.89 4.27 -27.88 -0.12 -2.01 16 8 C 0.51 7.75 7.69 -10.98 -0.08 7.66 16 9 O -0.55 -9.69 15.35 5.56 0.09 -9.61 16 10 N -0.72 -11.99 5.56 -60.30 -0.33 -12.32 16 11 C 0.12 2.53 5.61 -4.04 -0.02 2.50 16 12 C 0.01 0.30 5.09 -27.88 -0.14 0.16 16 13 C -0.52 -14.32 9.11 -34.44 -0.31 -14.64 16 14 H 0.06 1.56 7.74 -52.49 -0.41 1.15 16 15 C 0.06 1.64 5.46 -17.82 -0.10 1.54 16 16 N -0.89 -25.93 13.29 55.43 0.74 -25.19 16 17 Si 0.90 21.16 29.54 -169.99 -5.02 16.14 16 18 H -0.28 -6.39 7.11 56.52 0.40 -5.99 16 19 H -0.29 -6.69 7.11 56.52 0.40 -6.28 16 20 H -0.28 -6.40 7.11 56.52 0.40 -6.00 16 21 C -0.07 -0.70 4.03 -104.62 -0.42 -1.12 16 22 C -0.10 -0.93 9.11 -39.59 -0.36 -1.29 16 23 C -0.11 -1.02 9.83 -39.55 -0.39 -1.41 16 24 C -0.04 -0.37 6.32 -39.50 -0.25 -0.62 16 25 Cl -0.08 -0.73 28.96 -51.86 -1.50 -2.23 16 26 C -0.11 -1.02 9.83 -39.55 -0.39 -1.41 16 27 C -0.09 -0.87 8.93 -39.59 -0.35 -1.23 16 28 H 0.09 0.77 8.14 -51.93 -0.42 0.35 16 29 H 0.09 0.69 8.14 -51.93 -0.42 0.26 16 30 H 0.08 0.42 8.14 -51.93 -0.42 0.00 16 31 H 0.41 3.27 8.83 -40.82 -0.36 2.91 16 32 H 0.10 0.93 6.34 -51.93 -0.33 0.60 16 33 H 0.11 1.42 6.38 -51.93 -0.33 1.09 16 34 H 0.40 5.86 8.47 -40.82 -0.35 5.51 16 35 H 0.05 1.17 8.14 -51.93 -0.42 0.75 16 36 H 0.06 1.19 8.14 -51.93 -0.42 0.77 16 37 H 0.02 0.56 8.14 -51.93 -0.42 0.14 16 38 H 0.02 0.56 8.14 -51.93 -0.42 0.14 16 39 H 0.26 7.23 8.31 -40.82 -0.34 6.89 16 40 H 0.14 1.11 5.86 -52.49 -0.31 0.80 16 41 H 0.13 1.06 8.06 -52.49 -0.42 0.64 16 42 H 0.13 0.99 8.06 -52.49 -0.42 0.57 16 43 H 0.13 0.99 7.71 -52.49 -0.40 0.59 16 LS Contribution 377.95 15.07 5.70 5.70 Total: -1.00 -33.04 377.95 -9.13 -42.17 By element: Atomic # 1 Polarization: 11.38 SS G_CDS: -5.84 Total: 5.54 kcal Atomic # 6 Polarization: -2.57 SS G_CDS: -2.82 Total: -5.39 kcal Atomic # 7 Polarization: -44.84 SS G_CDS: 0.20 Total: -44.64 kcal Atomic # 8 Polarization: -17.46 SS G_CDS: 0.17 Total: -17.29 kcal Atomic # 14 Polarization: 21.16 SS G_CDS: -5.02 Total: 16.14 kcal Atomic # 17 Polarization: -0.73 SS G_CDS: -1.50 Total: -2.23 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -33.04 -9.13 -42.17 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000273025387.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.169 kcal (2) G-P(sol) polarization free energy of solvation -33.042 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.211 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.128 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.170 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.339 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds