Wall clock time and date at job start Tue Mar 31 2020 20:10:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 N 1.46903 * 109.47316 * 2 1 4 4 C 1.47018 * 110.99983 * 71.29264 * 3 2 1 5 5 C 1.53097 * 109.25645 * 182.39639 * 4 3 2 6 6 O 1.43018 * 109.29273 * 303.17482 * 5 4 3 7 7 C 1.43018 * 113.73824 * 58.60086 * 6 5 4 8 8 C 1.47010 * 111.00414 * 194.93164 * 3 2 1 9 9 H 1.09004 * 109.53950 * 297.56685 * 8 3 2 10 10 C 1.50706 * 109.50622 * 57.66738 * 8 3 2 11 11 O 1.21281 * 119.99571 * 31.27557 * 10 8 3 12 12 N 1.34776 * 120.00116 * 211.27324 * 10 8 3 13 13 C 1.37125 * 120.00053 * 4.19224 * 12 10 8 14 14 H 1.08003 * 119.99912 * 309.70048 * 13 12 10 15 15 C 1.38887 * 120.00215 * 129.69495 * 13 12 10 16 16 N 1.31425 * 119.99838 * 170.29694 * 15 13 12 17 17 Si 1.86797 * 120.00115 * 350.30585 * 15 13 12 18 18 H 1.48502 * 109.46959 * 95.44436 * 17 15 13 19 19 H 1.48497 * 109.47270 * 215.44787 * 17 15 13 20 20 H 1.48500 * 109.47097 * 335.44748 * 17 15 13 21 21 C 1.39808 * 119.99726 * 184.18679 * 12 10 8 22 22 C 1.38960 * 120.06682 * 352.19979 * 21 12 10 23 23 C 1.38070 * 119.93484 * 179.74521 * 22 21 12 24 24 C 1.38420 * 120.06086 * 0.50441 * 23 22 21 25 25 Cl 1.73608 * 119.93201 * 179.74742 * 24 23 22 26 26 C 1.38418 * 120.13504 * 359.77189 * 24 23 22 27 27 C 1.38071 * 120.06148 * 359.97384 * 26 24 23 28 28 H 1.08996 * 109.47488 * 299.99909 * 1 2 3 29 29 H 1.08997 * 109.47128 * 60.00108 * 1 2 3 30 30 H 1.09000 * 109.46900 * 180.02562 * 1 2 3 31 31 H 1.08991 * 109.47495 * 239.99594 * 2 1 3 32 32 H 1.09008 * 109.47091 * 119.99441 * 2 1 3 33 33 H 1.09002 * 109.50676 * 302.33155 * 4 3 2 34 34 H 1.09000 * 109.50419 * 62.41606 * 4 3 2 35 35 H 1.09000 * 109.50569 * 63.08613 * 5 4 3 36 36 H 1.09003 * 109.50552 * 183.21916 * 5 4 3 37 37 H 1.09001 * 109.50468 * 181.44145 * 7 6 5 38 38 H 1.08996 * 109.50544 * 61.35650 * 7 6 5 39 39 H 0.96999 * 120.00115 * 180.02562 * 16 15 13 40 40 H 1.08003 * 120.03168 * 359.97099 * 22 21 12 41 41 H 1.07998 * 119.97097 * 180.25552 * 23 22 21 42 42 H 1.08001 * 119.96940 * 180.02562 * 26 24 23 43 43 H 1.07997 * 120.03159 * 180.02562 * 27 26 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 7 2.0197 1.3850 0.0000 4 6 1.7803 2.0285 1.3000 5 6 2.2500 3.4842 1.2370 6 8 3.6294 3.5198 0.8610 7 6 3.8986 2.9013 -0.4001 8 6 3.4456 1.4397 -0.3536 9 1 4.0277 0.9018 0.3947 10 6 3.6537 0.8051 -1.7046 11 8 2.7797 0.8643 -2.5434 12 7 4.8110 0.1720 -1.9807 13 6 5.7645 0.0302 -1.0055 14 1 6.0827 0.8887 -0.4325 15 6 6.3211 -1.2172 -0.7545 16 7 7.3630 -1.3242 0.0393 17 14 5.5889 -2.7429 -1.5455 18 1 6.3361 -3.0632 -2.7882 19 1 5.6858 -3.8850 -0.6013 20 1 4.1628 -2.4933 -1.8757 21 6 5.0393 -0.3403 -3.2614 22 6 4.0169 -0.3431 -4.2025 23 6 4.2468 -0.8448 -5.4681 24 6 5.4913 -1.3543 -5.7964 25 17 5.7748 -1.9904 -7.3867 26 6 6.5100 -1.3581 -4.8593 27 6 6.2874 -0.8529 -3.5938 28 1 -0.3634 0.5138 0.8899 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 1.8933 -0.5138 -0.8899 32 1 1.8933 -0.5138 0.8901 33 1 0.7152 1.9993 1.5299 34 1 2.3346 1.4997 2.0754 35 1 1.6583 4.0260 0.4991 36 1 2.1273 3.9490 2.2153 37 1 4.9682 2.9446 -0.6057 38 1 3.3554 3.4259 -1.1860 39 1 7.7520 -2.1954 0.2143 40 1 3.0444 0.0502 -3.9454 41 1 3.4539 -0.8435 -6.2013 42 1 7.4800 -1.7559 -5.1185 43 1 7.0827 -0.8557 -2.8631 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000602352769.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:10:12 Heat of formation + Delta-G solvation = -21.304029 kcal Electronic energy + Delta-G solvation = -28613.899332 eV Core-core repulsion = 24686.367715 eV Total energy + Delta-G solvation = -3927.531617 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 338.118 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -40.65703 -39.22568 -37.69109 -36.19541 -35.70449 -35.11764 -32.39196 -31.60345 -30.70012 -30.44313 -28.93445 -26.44406 -25.52302 -24.51952 -22.43440 -21.94745 -21.73140 -20.44020 -19.33880 -18.30538 -16.89498 -16.44059 -16.25976 -15.93751 -15.77805 -14.98265 -14.77494 -14.59254 -14.44932 -14.15405 -13.88724 -13.74399 -13.46765 -13.19505 -13.11813 -12.71164 -12.57826 -12.45547 -12.08049 -11.86238 -11.77117 -11.63141 -11.40743 -11.30566 -11.13864 -10.90166 -10.66896 -10.64485 -10.38877 -10.31704 -10.24446 -9.58570 -9.54996 -9.04511 -8.56515 -8.31345 -8.09221 -7.25044 -6.73742 -4.63335 1.65442 1.89334 2.61121 2.98700 3.11362 3.17859 3.22865 3.63472 3.91775 3.95039 4.28016 4.28575 4.67980 5.00984 5.09950 5.23840 5.31313 5.32672 5.42370 5.45236 5.49995 5.56527 5.60698 5.67679 5.75367 5.88397 5.96599 5.98821 6.00081 6.04830 6.19079 6.24328 6.29272 6.39836 6.53570 6.66549 6.90169 6.96706 7.05331 7.13808 7.19301 7.28307 7.47053 7.74913 7.98865 8.58024 8.88425 9.14145 10.29303 Molecular weight = 338.12amu Principal moments of inertia in cm(-1) A = 0.013536 B = 0.004380 C = 0.003967 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2068.074727 B = 6390.442063 C = 7056.116137 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C 0.048 3.952 3 N -0.517 5.517 4 C 0.018 3.982 5 C 0.062 3.938 6 O -0.379 6.379 7 C 0.082 3.918 8 C 0.043 3.957 9 H 0.093 0.907 10 C 0.505 3.495 11 O -0.534 6.534 12 N -0.403 5.403 13 C -0.375 4.375 14 H 0.114 0.886 15 C 0.085 3.915 16 N -0.847 5.847 17 Si 0.862 3.138 18 H -0.249 1.249 19 H -0.285 1.285 20 H -0.261 1.261 21 C 0.162 3.838 22 C -0.175 4.175 23 C -0.095 4.095 24 C -0.079 4.079 25 Cl -0.100 7.100 26 C -0.093 4.093 27 C -0.143 4.143 28 H 0.049 0.951 29 H 0.064 0.936 30 H 0.054 0.946 31 H 0.080 0.920 32 H 0.033 0.967 33 H 0.086 0.914 34 H 0.043 0.957 35 H 0.058 0.942 36 H 0.095 0.905 37 H 0.106 0.894 38 H 0.060 0.940 39 H 0.282 0.718 40 H 0.188 0.812 41 H 0.125 0.875 42 H 0.125 0.875 43 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.254 2.707 -0.883 7.793 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C -0.079 4.079 3 N -0.244 5.244 4 C -0.110 4.110 5 C -0.015 4.015 6 O -0.297 6.297 7 C 0.005 3.995 8 C -0.068 4.068 9 H 0.110 0.890 10 C 0.296 3.704 11 O -0.415 6.415 12 N -0.112 5.112 13 C -0.501 4.501 14 H 0.131 0.869 15 C -0.126 4.126 16 N -0.479 5.479 17 Si 0.687 3.313 18 H -0.173 1.173 19 H -0.211 1.211 20 H -0.185 1.185 21 C 0.064 3.936 22 C -0.195 4.195 23 C -0.115 4.115 24 C -0.107 4.107 25 Cl -0.072 7.072 26 C -0.112 4.112 27 C -0.164 4.164 28 H 0.068 0.932 29 H 0.083 0.917 30 H 0.074 0.926 31 H 0.098 0.902 32 H 0.051 0.949 33 H 0.105 0.895 34 H 0.062 0.938 35 H 0.076 0.924 36 H 0.113 0.887 37 H 0.124 0.876 38 H 0.079 0.921 39 H 0.092 0.908 40 H 0.204 0.796 41 H 0.142 0.858 42 H 0.143 0.857 43 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -7.630 2.953 -1.457 8.310 hybrid contribution 0.330 -1.737 0.073 1.769 sum -7.300 1.216 -1.384 7.529 Atomic orbital electron populations 1.21706 0.94848 1.01120 1.02087 1.22123 0.96069 0.88393 1.01359 1.62021 1.15614 1.17994 1.28751 1.22833 1.01771 0.95963 0.90451 1.22659 0.83050 0.95091 1.00691 1.88009 1.25330 1.78499 1.37894 1.22480 1.01790 0.89475 0.85757 1.22119 0.89678 0.98366 0.96616 0.88962 1.20428 0.80859 0.80392 0.88694 1.90210 1.42813 1.61006 1.47453 1.41492 1.14990 1.47605 1.07083 1.19071 1.19185 0.97034 1.14784 0.86873 1.25434 0.94332 0.98331 0.94471 1.69665 1.18599 1.26338 1.33313 0.87136 0.81777 0.82258 0.80142 1.17337 1.21112 1.18466 1.18533 0.93614 0.95568 0.85885 1.22815 1.02730 1.02178 0.91774 1.20937 0.94876 0.98533 0.97125 1.20800 0.96605 1.07019 0.86273 1.98299 1.96608 1.86147 1.26102 1.20718 0.98124 1.00138 0.92269 1.21088 0.97328 1.01183 0.96759 0.93152 0.91678 0.92649 0.90185 0.94900 0.89530 0.93830 0.92367 0.88669 0.87634 0.92133 0.90777 0.79561 0.85753 0.85672 0.83233 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.83 9.95 37.16 0.37 -1.46 16 2 C 0.05 0.79 5.39 -3.82 -0.02 0.77 16 3 N -0.52 -8.56 4.25 -227.72 -0.97 -9.52 16 4 C 0.02 0.24 5.46 -3.71 -0.02 0.22 16 5 C 0.06 0.80 7.01 37.21 0.26 1.06 16 6 O -0.38 -6.10 10.83 -35.23 -0.38 -6.49 16 7 C 0.08 1.40 6.27 37.20 0.23 1.64 16 8 C 0.04 0.81 1.77 -68.75 -0.12 0.69 16 9 H 0.09 1.89 6.80 -51.93 -0.35 1.53 16 10 C 0.51 10.60 5.37 -10.98 -0.06 10.54 16 11 O -0.53 -11.60 12.22 5.56 0.07 -11.53 16 12 N -0.40 -8.99 2.27 -58.97 -0.13 -9.12 16 13 C -0.37 -8.87 7.59 -14.94 -0.11 -8.98 16 14 H 0.11 2.79 7.56 -52.48 -0.40 2.39 16 15 C 0.09 2.08 4.16 -17.49 -0.07 2.01 16 16 N -0.85 -21.49 13.96 55.49 0.77 -20.72 16 17 Si 0.86 19.65 24.19 -169.99 -4.11 15.54 16 18 H -0.25 -5.51 5.94 56.52 0.34 -5.17 16 19 H -0.28 -6.50 7.11 56.52 0.40 -6.09 16 20 H -0.26 -6.23 7.00 56.52 0.40 -5.83 16 21 C 0.16 3.54 4.52 -83.68 -0.38 3.16 16 22 C -0.18 -3.59 9.04 -39.38 -0.36 -3.95 16 23 C -0.10 -1.74 9.82 -39.58 -0.39 -2.13 16 24 C -0.08 -1.44 6.32 -39.45 -0.25 -1.68 16 25 Cl -0.10 -1.55 28.95 -51.86 -1.50 -3.06 16 26 C -0.09 -1.76 9.51 -39.58 -0.38 -2.14 16 27 C -0.14 -3.02 5.76 -39.37 -0.23 -3.25 16 28 H 0.05 0.57 6.70 -51.93 -0.35 0.22 16 29 H 0.06 0.90 8.14 -51.93 -0.42 0.47 16 30 H 0.05 0.65 8.14 -51.93 -0.42 0.23 16 31 H 0.08 1.54 6.07 -51.93 -0.32 1.22 16 32 H 0.03 0.53 8.06 -51.92 -0.42 0.11 16 33 H 0.09 0.97 6.59 -51.93 -0.34 0.63 16 34 H 0.04 0.61 8.14 -51.93 -0.42 0.19 16 35 H 0.06 0.72 8.14 -51.93 -0.42 0.30 16 36 H 0.10 0.96 8.14 -51.93 -0.42 0.54 16 37 H 0.11 1.81 7.93 -51.93 -0.41 1.40 16 38 H 0.06 1.01 8.14 -51.93 -0.42 0.59 16 39 H 0.28 6.73 8.31 -40.82 -0.34 6.39 16 40 H 0.19 3.95 4.56 -56.11 -0.26 3.69 16 41 H 0.12 1.96 8.06 -52.49 -0.42 1.54 16 42 H 0.13 2.10 8.06 -52.49 -0.42 1.67 16 43 H 0.15 3.34 5.56 -52.49 -0.29 3.04 16 LS Contribution 347.76 15.07 5.24 5.24 Total: -1.00 -25.86 347.76 -8.25 -34.11 By element: Atomic # 1 Polarization: 14.77 SS G_CDS: -5.72 Total: 9.05 kcal Atomic # 6 Polarization: -1.99 SS G_CDS: -1.52 Total: -3.51 kcal Atomic # 7 Polarization: -39.04 SS G_CDS: -0.33 Total: -39.36 kcal Atomic # 8 Polarization: -17.70 SS G_CDS: -0.31 Total: -18.01 kcal Atomic # 14 Polarization: 19.65 SS G_CDS: -4.11 Total: 15.54 kcal Atomic # 17 Polarization: -1.55 SS G_CDS: -1.50 Total: -3.06 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -25.86 -8.25 -34.11 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000602352769.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 12.807 kcal (2) G-P(sol) polarization free energy of solvation -25.857 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.050 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.254 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.111 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.304 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds