Wall clock time and date at job start Tue Mar 31 2020 21:08:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35673 * 117.00345 * 2 1 4 4 C 1.38701 * 120.13290 * 0.22990 * 3 2 1 5 5 C 1.38059 * 120.09541 * 180.27652 * 4 3 2 6 6 C 1.38650 * 120.37732 * 359.74892 * 5 4 3 7 7 Cl 1.73600 * 119.86146 * 180.02562 * 6 5 4 8 8 C 1.37890 * 120.27499 * 359.97438 * 6 5 4 9 9 C 1.39713 * 119.89147 * 0.02562 * 8 6 5 10 10 C 1.47539 * 120.18667 * 179.97438 * 9 8 6 11 11 O 1.21590 * 120.00347 * 204.89854 * 10 9 8 12 12 N 1.34782 * 119.99528 * 24.89684 * 10 9 8 13 13 C 1.48213 * 119.96764 * 170.97685 * 12 10 9 14 14 C 1.47137 * 110.34297 * 102.47004 * 13 12 10 15 15 C 1.53793 * 111.84292 * 58.29649 * 14 13 12 16 16 N 1.43469 * 107.95809 * 281.66809 * 15 14 13 17 17 C 1.36934 * 118.93797 * 273.60756 * 16 15 14 18 18 H 1.07996 * 120.00018 * 26.33303 * 17 16 15 19 19 C 1.38815 * 120.00014 * 206.33374 * 17 16 15 20 20 N 1.31616 * 119.99749 * 15.89245 * 19 17 16 21 21 Si 1.86801 * 120.00128 * 195.89517 * 19 17 16 22 22 H 1.48493 * 109.47284 * 265.01363 * 21 19 17 23 23 H 1.48498 * 109.47056 * 145.00919 * 21 19 17 24 24 H 1.48503 * 109.47111 * 25.01263 * 21 19 17 25 25 C 1.48855 * 122.11900 * 93.89205 * 16 15 14 26 26 C 1.43621 * 119.97388 * 350.95507 * 12 10 9 27 27 H 1.09008 * 109.46798 * 300.00053 * 1 2 3 28 28 H 1.08997 * 109.47316 * 59.99761 * 1 2 3 29 29 H 1.09003 * 109.47239 * 180.02562 * 1 2 3 30 30 H 1.07993 * 119.95788 * 0.02625 * 4 3 2 31 31 H 1.08001 * 119.81170 * 179.71962 * 5 4 3 32 32 H 1.07990 * 120.05349 * 180.02562 * 8 6 5 33 33 H 1.09005 * 109.32333 * 342.20192 * 13 12 10 34 34 H 1.08998 * 109.18156 * 222.64507 * 13 12 10 35 35 H 1.09006 * 109.00762 * 297.68651 * 14 13 12 36 36 H 1.09001 * 109.00870 * 178.90812 * 14 13 12 37 37 H 1.08998 * 109.76856 * 162.05237 * 15 14 13 38 38 H 1.08998 * 109.80565 * 41.30789 * 15 14 13 39 39 H 0.97000 * 120.00077 * 180.02562 * 20 19 17 40 40 H 1.08997 * 109.48408 * 80.34413 * 25 16 15 41 41 H 1.09005 * 109.47988 * 200.38088 * 25 16 15 42 42 H 1.08998 * 108.87092 * 31.46193 * 26 12 10 43 43 H 1.08995 * 108.87407 * 150.00433 * 26 12 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0450 1.2088 0.0000 4 6 1.2924 2.3738 0.0048 5 6 1.9200 3.6035 -0.0010 6 6 3.3041 3.6842 -0.0063 7 17 4.0794 5.2375 -0.0129 8 6 4.0674 2.5359 -0.0054 9 6 3.4441 1.2855 0.0004 10 6 4.2545 0.0526 0.0008 11 8 3.7887 -0.9813 -0.4379 12 7 5.5113 0.0725 0.4875 13 6 6.2531 -1.1970 0.6739 14 6 7.2276 -1.3843 -0.4124 15 6 8.2302 -0.2206 -0.4887 16 7 7.5802 0.8815 -1.1377 17 6 7.5997 0.9503 -2.5052 18 1 7.6950 0.0473 -3.0899 19 6 7.4969 2.1806 -3.1398 20 7 7.6940 3.2902 -2.4600 21 14 7.0787 2.2613 -4.9586 22 1 8.3312 2.3555 -5.7508 23 1 6.2364 3.4560 -5.2203 24 1 6.3360 1.0366 -5.3506 25 6 6.8906 1.9559 -0.3722 26 6 6.1305 1.3237 0.8245 27 1 -0.3633 0.5139 0.8901 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3634 -1.0277 0.0005 30 1 0.2138 2.3191 0.0090 31 1 1.3294 4.5078 -0.0018 32 1 5.1452 2.6029 -0.0092 33 1 5.5493 -2.0293 0.6747 34 1 6.7784 -1.1679 1.6286 35 1 6.6935 -1.4555 -1.3600 36 1 7.7734 -2.3126 -0.2437 37 1 9.1042 -0.5242 -1.0649 38 1 8.5347 0.0711 0.5164 39 1 7.6219 4.1499 -2.9033 40 1 7.6273 2.6693 -0.0030 41 1 6.1821 2.4685 -1.0229 42 1 5.3610 2.0188 1.1604 43 1 6.8367 1.1598 1.6384 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000989608321.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 21:08:32 Heat of formation + Delta-G solvation = 29.148927 kcal Electronic energy + Delta-G solvation = -28921.779682 eV Core-core repulsion = 24996.435869 eV Total energy + Delta-G solvation = -3925.343812 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 338.118 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -40.78397 -39.22133 -37.57784 -36.85783 -35.94586 -34.24482 -33.35199 -31.21658 -30.58925 -29.87278 -27.85000 -27.31887 -25.59340 -23.79219 -23.65810 -22.42915 -21.52151 -19.75790 -19.24675 -17.81617 -17.31556 -16.55792 -16.35736 -15.90885 -15.61138 -15.50245 -14.91212 -14.81036 -14.26553 -14.01385 -13.74214 -13.60485 -13.13878 -12.96940 -12.93405 -12.55285 -12.43101 -12.22378 -12.01670 -11.77574 -11.46029 -11.39889 -11.08342 -10.87684 -10.75168 -10.66560 -10.51652 -10.42869 -10.27022 -10.08996 -9.86610 -9.69459 -9.28566 -8.90224 -8.45740 -8.13802 -7.92155 -6.68451 -5.79070 -3.20481 0.93726 1.27294 2.34483 3.11123 3.24872 3.39119 3.47197 3.49716 3.51983 3.87575 4.52056 4.61342 4.76237 4.93263 5.05841 5.09464 5.17107 5.23408 5.37949 5.38970 5.48078 5.58486 5.65942 5.76411 5.83855 5.88557 5.95858 6.02534 6.05889 6.11758 6.24281 6.30426 6.47845 6.54651 6.56328 6.85424 6.90170 7.06963 7.27170 7.33198 7.38287 7.83575 7.98907 8.44905 8.72765 9.20741 9.88037 10.33696 11.29169 Molecular weight = 338.12amu Principal moments of inertia in cm(-1) A = 0.009339 B = 0.005989 C = 0.004721 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2997.546391 B = 4673.828877 C = 5929.589394 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.283 6.283 3 C 0.181 3.819 4 C -0.216 4.216 5 C -0.052 4.052 6 C -0.083 4.083 7 Cl -0.063 7.063 8 C -0.079 4.079 9 C -0.151 4.151 10 C 0.569 3.431 11 O -0.531 6.531 12 N -0.580 5.580 13 C 0.134 3.866 14 C -0.171 4.171 15 C 0.163 3.837 16 N -0.586 5.586 17 C -0.253 4.253 18 H 0.064 0.936 19 C 0.007 3.993 20 N -0.905 5.905 21 Si 0.894 3.106 22 H -0.287 1.287 23 H -0.288 1.288 24 H -0.279 1.279 25 C 0.149 3.851 26 C 0.044 3.956 27 H 0.054 0.946 28 H 0.056 0.944 29 H 0.101 0.899 30 H 0.139 0.861 31 H 0.136 0.864 32 H 0.204 0.796 33 H 0.076 0.924 34 H 0.061 0.939 35 H 0.070 0.930 36 H 0.055 0.945 37 H 0.047 0.953 38 H 0.034 0.966 39 H 0.254 0.746 40 H 0.050 0.950 41 H 0.087 0.913 42 H 0.090 0.910 43 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.425 -0.444 10.169 15.302 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.194 6.194 3 C 0.133 3.867 4 C -0.235 4.235 5 C -0.071 4.071 6 C -0.110 4.110 7 Cl -0.034 7.034 8 C -0.097 4.097 9 C -0.155 4.155 10 C 0.357 3.643 11 O -0.409 6.409 12 N -0.311 5.311 13 C 0.013 3.987 14 C -0.212 4.212 15 C 0.034 3.966 16 N -0.307 5.307 17 C -0.383 4.383 18 H 0.082 0.918 19 C -0.191 4.191 20 N -0.549 5.549 21 Si 0.723 3.277 22 H -0.214 1.214 23 H -0.215 1.215 24 H -0.205 1.205 25 C 0.024 3.976 26 C -0.082 4.082 27 H 0.073 0.927 28 H 0.075 0.925 29 H 0.119 0.881 30 H 0.157 0.843 31 H 0.153 0.847 32 H 0.220 0.780 33 H 0.095 0.905 34 H 0.080 0.920 35 H 0.089 0.911 36 H 0.074 0.926 37 H 0.066 0.934 38 H 0.052 0.948 39 H 0.064 0.936 40 H 0.068 0.932 41 H 0.105 0.895 42 H 0.107 0.893 43 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges -11.506 -0.908 9.905 15.209 hybrid contribution -0.461 0.595 -1.137 1.363 sum -11.966 -0.314 8.768 14.838 Atomic orbital electron populations 1.23141 0.78873 1.04172 1.01123 1.86333 1.20676 1.25547 1.86867 1.19045 0.90925 0.84793 0.91964 1.21058 1.00182 0.91302 1.10964 1.20960 0.92555 0.97888 0.95683 1.20705 0.92647 0.87466 1.10150 1.98377 1.81116 1.26732 1.97153 1.23280 1.05067 0.89136 0.92200 1.19296 0.90666 0.94241 1.11264 1.17743 0.81298 0.87434 0.77817 1.90744 1.72117 1.32673 1.45360 1.47176 1.12836 1.07383 1.63713 1.20552 0.94411 0.85649 0.98124 1.21878 0.99170 1.00119 1.00043 1.20306 0.92940 0.87692 0.95638 1.43530 1.60213 1.24081 1.02879 1.19146 1.45334 0.92001 0.81830 0.91780 1.24944 1.00822 0.95783 0.97588 1.69978 1.52520 0.96923 1.35517 0.86403 0.78144 0.77357 0.85756 1.21444 1.21451 1.20460 1.22212 0.94949 0.90006 0.90456 1.23119 0.98115 0.86528 1.00392 0.92722 0.92539 0.88083 0.84326 0.84664 0.77980 0.90548 0.92025 0.91107 0.92618 0.93443 0.94793 0.93559 0.93180 0.89528 0.89297 0.91565 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.22 9.81 101.05 0.99 1.21 16 2 O -0.28 -4.53 8.86 -38.95 -0.35 -4.88 16 3 C 0.18 2.94 6.67 -38.70 -0.26 2.68 16 4 C -0.22 -2.77 9.03 -39.48 -0.36 -3.13 16 5 C -0.05 -0.67 9.81 -39.49 -0.39 -1.06 16 6 C -0.08 -1.29 6.31 -39.56 -0.25 -1.54 16 7 Cl -0.06 -0.95 28.94 -51.86 -1.50 -2.45 16 8 C -0.08 -1.40 7.02 -39.16 -0.27 -1.67 16 9 C -0.15 -2.79 5.69 -104.85 -0.60 -3.39 16 10 C 0.57 11.77 7.43 -12.47 -0.09 11.68 16 11 O -0.53 -12.33 15.09 -14.94 -0.23 -12.55 16 12 N -0.58 -10.97 2.46 -177.68 -0.44 -11.40 16 13 C 0.13 2.29 5.65 -5.91 -0.03 2.26 16 14 C -0.17 -3.14 5.64 -29.13 -0.16 -3.30 16 15 C 0.16 3.27 5.63 -5.23 -0.03 3.24 16 16 N -0.59 -13.99 2.53 -171.78 -0.43 -14.42 16 17 C -0.25 -6.86 9.25 -15.06 -0.14 -7.00 16 18 H 0.06 1.77 7.88 -52.49 -0.41 1.35 16 19 C 0.01 0.19 4.90 -17.43 -0.09 0.11 16 20 N -0.90 -25.12 11.06 55.49 0.61 -24.50 16 21 Si 0.89 22.13 29.58 -169.99 -5.03 17.10 16 22 H -0.29 -7.07 7.11 56.52 0.40 -6.67 16 23 H -0.29 -7.18 7.11 56.52 0.40 -6.78 16 24 H -0.28 -6.99 7.11 56.52 0.40 -6.58 16 25 C 0.15 3.29 4.46 -1.56 -0.01 3.28 16 26 C 0.04 0.78 4.71 -4.39 -0.02 0.75 16 27 H 0.05 0.43 7.65 -51.92 -0.40 0.03 16 28 H 0.06 0.49 7.67 -51.93 -0.40 0.09 16 29 H 0.10 0.84 8.14 -51.93 -0.42 0.42 16 30 H 0.14 1.30 6.30 -52.49 -0.33 0.97 16 31 H 0.14 1.36 8.06 -52.49 -0.42 0.93 16 32 H 0.20 3.82 1.73 -52.51 -0.09 3.73 16 33 H 0.08 1.33 7.24 -51.93 -0.38 0.95 16 34 H 0.06 0.88 8.05 -51.93 -0.42 0.46 16 35 H 0.07 1.56 7.91 -51.93 -0.41 1.15 16 36 H 0.06 0.86 8.14 -51.93 -0.42 0.44 16 37 H 0.05 0.98 8.02 -51.93 -0.42 0.56 16 38 H 0.03 0.62 7.59 -51.93 -0.39 0.23 16 39 H 0.25 6.93 8.31 -40.82 -0.34 6.59 16 40 H 0.05 1.16 7.99 -51.93 -0.41 0.75 16 41 H 0.09 2.12 4.64 -51.93 -0.24 1.88 16 42 H 0.09 1.46 4.26 -51.95 -0.22 1.24 16 43 H 0.07 1.04 7.72 -51.93 -0.40 0.64 16 LS Contribution 349.15 15.07 5.26 5.26 Total: -1.00 -32.21 349.15 -9.13 -41.34 By element: Atomic # 1 Polarization: 7.71 SS G_CDS: -5.33 Total: 2.38 kcal Atomic # 6 Polarization: 5.83 SS G_CDS: -1.70 Total: 4.12 kcal Atomic # 7 Polarization: -50.08 SS G_CDS: -0.26 Total: -50.33 kcal Atomic # 8 Polarization: -16.86 SS G_CDS: -0.57 Total: -17.43 kcal Atomic # 14 Polarization: 22.13 SS G_CDS: -5.03 Total: 17.10 kcal Atomic # 17 Polarization: -0.95 SS G_CDS: -1.50 Total: -2.45 kcal Total LS contribution 5.26 Total: 5.26 kcal Total: -32.21 -9.13 -41.34 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000989608321.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 70.487 kcal (2) G-P(sol) polarization free energy of solvation -32.211 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.276 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.127 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.338 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.149 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds