Wall clock time and date at job start Tue Mar 31 2020 20:58:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46490 * 1 3 3 C 1.34780 * 120.00111 * 2 1 4 4 O 1.21280 * 120.00423 * 179.97438 * 3 2 1 5 5 C 1.50701 * 119.99795 * 0.02562 * 3 2 1 6 6 O 1.42903 * 109.46878 * 179.97438 * 5 3 2 7 7 C 1.35904 * 116.99628 * 179.97438 * 6 5 3 8 8 C 1.38758 * 120.05096 * 359.72829 * 7 6 5 9 9 C 1.38134 * 119.97150 * 179.71918 * 8 7 6 10 10 C 1.38268 * 120.06299 * 0.55238 * 9 8 7 11 11 C 1.38359 * 120.10338 * 359.72556 * 10 9 8 12 12 Cl 1.73597 * 119.98620 * 179.97438 * 11 10 9 13 13 C 1.38282 * 120.02711 * 359.97438 * 11 10 9 14 14 C 1.46497 * 120.00322 * 180.02562 * 2 1 3 15 15 H 1.09004 * 110.89172 * 179.29907 * 14 2 1 16 16 C 1.55158 * 111.00375 * 303.17927 * 14 2 1 17 17 C 1.54324 * 102.94501 * 153.57318 * 16 14 2 18 18 N 1.47020 * 107.26986 * 337.81011 * 17 16 14 19 19 C 1.36939 * 125.64619 * 178.97477 * 18 17 16 20 20 H 1.08005 * 119.99855 * 179.97438 * 19 18 17 21 21 C 1.38813 * 120.00040 * 359.97438 * 19 18 17 22 22 N 1.31616 * 120.00025 * 0.02562 * 21 19 18 23 23 Si 1.86798 * 119.99608 * 180.02562 * 21 19 18 24 24 H 1.48494 * 109.47129 * 60.00103 * 23 21 19 25 25 H 1.48504 * 109.46857 * 179.97438 * 23 21 19 26 26 H 1.48498 * 109.47151 * 299.99592 * 23 21 19 27 27 C 1.47468 * 108.72396 * 358.96881 * 18 17 16 28 28 H 1.08995 * 109.47620 * 89.99771 * 1 2 3 29 29 H 1.09006 * 109.47028 * 209.99878 * 1 2 3 30 30 H 1.09002 * 109.47109 * 329.99455 * 1 2 3 31 31 H 1.09002 * 109.47060 * 299.99722 * 5 3 2 32 32 H 1.09001 * 109.47380 * 59.99809 * 5 3 2 33 33 H 1.08008 * 120.01469 * 359.97438 * 8 7 6 34 34 H 1.08005 * 119.96588 * 180.25405 * 9 8 7 35 35 H 1.08002 * 119.94363 * 179.69890 * 10 9 8 36 36 H 1.07998 * 120.03806 * 180.02562 * 13 11 10 37 37 H 1.09004 * 110.72197 * 271.93962 * 16 14 2 38 38 H 1.09005 * 110.71826 * 35.03156 * 16 14 2 39 39 H 1.09000 * 109.87903 * 97.22632 * 17 16 14 40 40 H 1.09000 * 109.88072 * 218.23256 * 17 16 14 41 41 H 0.96996 * 119.99941 * 180.02562 * 22 21 19 42 42 H 1.08990 * 110.35220 * 265.25582 * 27 18 17 43 43 H 1.09002 * 110.40367 * 142.91361 * 27 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1388 1.1672 0.0000 4 8 3.3516 1.1673 0.0005 5 6 1.3853 2.4723 0.0006 6 8 2.3140 3.5585 0.0011 7 6 1.7945 4.8143 0.0011 8 6 0.4190 4.9973 -0.0050 9 6 -0.1073 6.2744 0.0008 10 6 0.7352 7.3708 0.0013 11 6 2.1072 7.1917 0.0016 12 17 3.1621 8.5703 0.0015 13 6 2.6384 5.9149 0.0020 14 6 2.1975 -1.2687 -0.0006 15 1 3.2737 -1.0961 -0.0129 16 6 1.7891 -2.1472 1.2114 17 6 2.0704 -3.5795 0.7105 18 7 2.0612 -3.5377 -0.7591 19 6 2.2903 -4.6024 -1.5892 20 1 2.2608 -4.4680 -2.6605 21 6 2.5605 -5.8543 -1.0539 22 7 2.5961 -6.0181 0.2515 23 14 2.8738 -7.3064 -2.1864 24 1 4.0524 -7.0206 -3.0433 25 1 3.1366 -8.5208 -1.3730 26 1 1.6820 -7.5322 -3.0430 27 6 1.7642 -2.1595 -1.1916 28 1 -0.3634 0.0000 -1.0276 29 1 -0.3633 -0.8900 0.5138 30 1 -0.3633 0.8899 0.5139 31 1 0.7583 2.5303 -0.8892 32 1 0.7589 2.5299 0.8908 33 1 -0.2399 4.1415 -0.0103 34 1 -1.1779 6.4167 0.0002 35 1 0.3217 8.3685 0.0010 36 1 3.7092 5.7749 0.0026 37 1 2.4041 -1.9149 2.0808 38 1 0.7318 -2.0174 1.4429 39 1 3.0460 -3.9115 1.0658 40 1 1.2953 -4.2567 1.0694 41 1 2.7852 -6.8928 0.6256 42 1 0.6975 -2.0439 -1.3834 43 1 2.3401 -1.9083 -2.0823 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001267778379.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:58:13 Heat of formation + Delta-G solvation = -11.454633 kcal Electronic energy + Delta-G solvation = -26095.606331 eV Core-core repulsion = 22168.501816 eV Total energy + Delta-G solvation = -3927.104515 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 338.118 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -40.80777 -39.77907 -38.08367 -37.24191 -36.59152 -34.95384 -32.29477 -31.49736 -30.52382 -29.49675 -28.64243 -27.45304 -26.51812 -24.44787 -23.28795 -22.72937 -20.74125 -20.18208 -18.97031 -18.93595 -17.19223 -17.03928 -16.73655 -16.67135 -16.33399 -15.73329 -15.21279 -14.90174 -14.67391 -14.28143 -14.10887 -13.95465 -13.72893 -13.19265 -13.12088 -12.86724 -12.53157 -12.46197 -12.30567 -12.18139 -12.03100 -11.77888 -11.66158 -11.31626 -11.29266 -10.98535 -10.89767 -10.80434 -10.34842 -10.15554 -9.90135 -9.77622 -9.68605 -9.30278 -8.70504 -8.67327 -8.49454 -6.89116 -5.74913 -3.09438 0.66996 0.89893 1.60850 2.36487 2.50626 3.18115 3.33555 3.39590 3.43867 3.45018 4.17743 4.35119 4.47875 4.48694 4.60157 4.65573 4.68988 4.82258 4.95999 4.99226 5.21985 5.35732 5.36288 5.43061 5.54411 5.59032 5.65223 5.69022 5.78939 5.82163 5.86359 6.04674 6.11194 6.20796 6.43017 6.49725 6.60453 6.79392 6.93779 7.38465 7.50514 7.55013 7.77709 8.11205 8.21103 9.17317 9.77135 10.41557 11.36587 Molecular weight = 338.12amu Principal moments of inertia in cm(-1) A = 0.033453 B = 0.001819 C = 0.001789 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 836.788409 B =15387.438773 C =15651.793279 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.070 3.930 2 N -0.597 5.597 3 C 0.514 3.486 4 O -0.517 6.517 5 C 0.043 3.957 6 O -0.284 6.284 7 C 0.147 3.853 8 C -0.208 4.208 9 C -0.065 4.065 10 C -0.152 4.152 11 C 0.005 3.995 12 Cl -0.062 7.062 13 C -0.143 4.143 14 C 0.123 3.877 15 H 0.108 0.892 16 C -0.153 4.153 17 C 0.179 3.821 18 N -0.602 5.602 19 C -0.230 4.230 20 H 0.078 0.922 21 C -0.007 4.007 22 N -0.922 5.922 23 Si 0.914 3.086 24 H -0.284 1.284 25 H -0.290 1.290 26 H -0.285 1.285 27 C 0.132 3.868 28 H 0.062 0.938 29 H 0.084 0.916 30 H 0.065 0.935 31 H 0.095 0.905 32 H 0.094 0.906 33 H 0.135 0.865 34 H 0.136 0.864 35 H 0.135 0.865 36 H 0.144 0.856 37 H 0.063 0.937 38 H 0.062 0.938 39 H 0.049 0.951 40 H 0.046 0.954 41 H 0.254 0.746 42 H 0.022 0.978 43 H 0.042 0.958 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.930 26.408 1.876 27.940 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 N -0.331 5.331 3 C 0.299 3.701 4 O -0.392 6.392 5 C -0.035 4.035 6 O -0.196 6.196 7 C 0.101 3.899 8 C -0.227 4.227 9 C -0.084 4.084 10 C -0.171 4.171 11 C -0.022 4.022 12 Cl -0.033 7.033 13 C -0.162 4.162 14 C 0.020 3.980 15 H 0.126 0.874 16 C -0.192 4.192 17 C 0.054 3.946 18 N -0.329 5.329 19 C -0.359 4.359 20 H 0.096 0.904 21 C -0.204 4.204 22 N -0.569 5.569 23 Si 0.745 3.255 24 H -0.211 1.211 25 H -0.216 1.216 26 H -0.212 1.212 27 C 0.004 3.996 28 H 0.080 0.920 29 H 0.103 0.897 30 H 0.084 0.916 31 H 0.113 0.887 32 H 0.112 0.888 33 H 0.153 0.847 34 H 0.154 0.846 35 H 0.152 0.848 36 H 0.162 0.838 37 H 0.082 0.918 38 H 0.080 0.920 39 H 0.068 0.932 40 H 0.064 0.936 41 H 0.064 0.936 42 H 0.040 0.960 43 H 0.060 0.940 Dipole moment (debyes) X Y Z Total from point charges -7.914 26.210 1.905 27.445 hybrid contribution -0.157 -0.757 -0.526 0.935 sum -8.071 25.453 1.379 26.738 Atomic orbital electron populations 1.21882 0.79673 1.03422 1.02350 1.47717 1.07005 1.05614 1.72765 1.19867 0.88074 0.84435 0.77684 1.90760 1.13455 1.86771 1.48213 1.22628 0.91966 0.85171 1.03783 1.86191 1.34273 1.11188 1.87951 1.18827 0.91588 0.84504 0.95009 1.21408 0.93779 0.99120 1.08352 1.20904 1.00022 0.91125 0.96318 1.20972 0.91032 1.00188 1.04867 1.20566 0.91172 0.87910 1.02543 1.98387 1.66196 1.42007 1.96756 1.20242 1.01032 0.88549 1.06418 1.22536 0.97507 0.80453 0.97478 0.87368 1.23265 1.00440 0.98553 0.96956 1.21146 1.01099 0.89020 0.83293 1.44378 1.83442 1.03040 1.02069 1.19004 1.41588 0.86278 0.88988 0.90402 1.24819 1.01799 0.97655 0.96078 1.69938 1.55184 1.22635 1.09149 0.86166 0.78127 0.81870 0.79384 1.21092 1.21562 1.21150 1.21744 0.97320 0.85960 0.94529 0.91992 0.89703 0.91624 0.88736 0.88805 0.84675 0.84594 0.84752 0.83807 0.91794 0.91988 0.93244 0.93566 0.93608 0.96015 0.94003 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.66 8.99 59.84 0.54 1.20 16 2 N -0.60 -8.29 2.91 -171.48 -0.50 -8.79 16 3 C 0.51 7.46 7.75 -10.98 -0.09 7.38 16 4 O -0.52 -9.99 15.88 -14.35 -0.23 -10.22 16 5 C 0.04 0.43 3.77 36.01 0.14 0.56 16 6 O -0.28 -3.53 9.67 -39.35 -0.38 -3.91 16 7 C 0.15 1.50 6.69 -39.22 -0.26 1.23 16 8 C -0.21 -1.56 9.04 -39.43 -0.36 -1.91 16 9 C -0.07 -0.42 10.04 -39.61 -0.40 -0.81 16 10 C -0.15 -1.09 9.83 -39.53 -0.39 -1.47 16 11 C 0.00 0.04 6.32 -39.52 -0.25 -0.21 16 12 Cl -0.06 -0.52 28.95 -51.86 -1.50 -2.02 16 13 C -0.14 -1.44 9.77 -39.40 -0.38 -1.82 16 14 C 0.12 2.21 3.45 -65.78 -0.23 1.98 16 15 H 0.11 2.21 7.01 -51.93 -0.36 1.84 16 16 C -0.15 -2.76 6.51 -24.90 -0.16 -2.93 16 17 C 0.18 4.25 5.37 -3.07 -0.02 4.23 16 18 N -0.60 -15.15 3.40 -170.04 -0.58 -15.73 16 19 C -0.23 -6.37 10.28 -15.06 -0.15 -6.52 16 20 H 0.08 2.07 7.83 -52.48 -0.41 1.66 16 21 C -0.01 -0.20 5.49 -17.43 -0.10 -0.29 16 22 N -0.92 -26.77 10.31 55.49 0.57 -26.20 16 23 Si 0.91 21.96 29.55 -169.99 -5.02 16.93 16 24 H -0.28 -6.77 7.11 56.52 0.40 -6.37 16 25 H -0.29 -7.01 7.11 56.52 0.40 -6.61 16 26 H -0.28 -6.71 7.11 56.52 0.40 -6.31 16 27 C 0.13 2.67 6.81 -2.50 -0.02 2.66 16 28 H 0.06 0.53 8.08 -51.93 -0.42 0.11 16 29 H 0.08 0.87 6.21 -51.93 -0.32 0.55 16 30 H 0.07 0.39 6.44 -51.93 -0.33 0.06 16 31 H 0.09 0.69 7.61 -51.93 -0.40 0.29 16 32 H 0.09 0.66 6.94 -51.93 -0.36 0.30 16 33 H 0.14 0.70 6.30 -52.48 -0.33 0.37 16 34 H 0.14 0.49 8.06 -52.48 -0.42 0.07 16 35 H 0.13 0.71 8.06 -52.49 -0.42 0.29 16 36 H 0.14 1.44 8.06 -52.49 -0.42 1.02 16 37 H 0.06 1.10 8.14 -51.93 -0.42 0.68 16 38 H 0.06 0.98 6.20 -51.93 -0.32 0.66 16 39 H 0.05 1.31 7.38 -51.93 -0.38 0.93 16 40 H 0.05 1.19 7.50 -51.93 -0.39 0.80 16 41 H 0.25 7.17 8.31 -40.82 -0.34 6.83 16 42 H 0.02 0.42 7.10 -51.93 -0.37 0.05 16 43 H 0.04 0.87 8.14 -51.93 -0.42 0.45 16 LS Contribution 365.47 15.07 5.51 5.51 Total: -1.00 -33.56 365.47 -9.90 -43.46 By element: Atomic # 1 Polarization: 3.33 SS G_CDS: -5.65 Total: -2.32 kcal Atomic # 6 Polarization: 5.41 SS G_CDS: -2.12 Total: 3.28 kcal Atomic # 7 Polarization: -50.20 SS G_CDS: -0.50 Total: -50.71 kcal Atomic # 8 Polarization: -13.52 SS G_CDS: -0.61 Total: -14.13 kcal Atomic # 14 Polarization: 21.96 SS G_CDS: -5.02 Total: 16.93 kcal Atomic # 17 Polarization: -0.52 SS G_CDS: -1.50 Total: -2.02 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -33.56 -9.90 -43.46 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001267778379.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.005 kcal (2) G-P(sol) polarization free energy of solvation -33.556 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.551 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.904 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.460 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.455 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds