Wall clock time and date at job start Tue Mar 31 2020 20:19:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34225 * 116.99759 * 2 1 4 4 O 1.20829 * 120.00313 * 0.02562 * 3 2 1 5 5 C 1.50708 * 119.99991 * 179.97438 * 3 2 1 6 6 H 1.08999 * 109.46906 * 300.00363 * 5 3 2 7 7 C 1.50703 * 109.46675 * 60.00215 * 5 3 2 8 8 C 1.38241 * 119.98800 * 79.72684 * 7 5 3 9 9 C 1.38214 * 120.01296 * 179.72111 * 8 7 5 10 10 C 1.38357 * 119.98351 * 0.55271 * 9 8 7 11 11 Cl 1.73598 * 120.01056 * 179.70262 * 10 9 8 12 12 C 1.38353 * 119.97571 * 359.72334 * 10 9 8 13 13 C 1.38214 * 119.98632 * 359.97438 * 12 10 9 14 14 N 1.46901 * 109.47069 * 179.97438 * 5 3 2 15 15 C 1.46897 * 110.99707 * 184.30380 * 14 5 3 16 16 C 1.53239 * 109.34035 * 172.74745 * 15 14 5 17 17 N 1.47080 * 108.51955 * 53.82721 * 16 15 14 18 18 C 1.36942 * 120.87668 * 128.83446 * 17 16 15 19 19 H 1.08002 * 119.99620 * 206.55650 * 18 17 16 20 20 C 1.38808 * 120.00289 * 26.56749 * 18 17 16 21 21 N 1.31623 * 119.99986 * 17.01549 * 20 18 17 22 22 Si 1.86799 * 120.00184 * 197.02297 * 20 18 17 23 23 H 1.48497 * 109.47078 * 359.97438 * 22 20 18 24 24 H 1.48506 * 109.46957 * 119.99694 * 22 20 18 25 25 H 1.48495 * 109.46952 * 239.99532 * 22 20 18 26 26 C 1.47076 * 118.24162 * 308.82003 * 17 16 15 27 27 C 1.46896 * 110.99952 * 60.00549 * 14 5 3 28 28 H 1.09002 * 109.47101 * 179.97438 * 1 2 3 29 29 H 1.09001 * 109.47284 * 299.99743 * 1 2 3 30 30 H 1.08998 * 109.47001 * 59.99860 * 1 2 3 31 31 H 1.07997 * 119.98904 * 0.02562 * 8 7 5 32 32 H 1.07995 * 120.00790 * 180.26959 * 9 8 7 33 33 H 1.07994 * 120.00320 * 179.97438 * 12 10 9 34 34 H 1.07999 * 119.99390 * 179.97438 * 13 12 10 35 35 H 1.09003 * 109.49632 * 292.70612 * 15 14 5 36 36 H 1.09003 * 109.49579 * 52.78635 * 15 14 5 37 37 H 1.08995 * 109.62590 * 294.12075 * 16 15 14 38 38 H 1.09002 * 109.63061 * 173.53803 * 16 15 14 39 39 H 0.96999 * 120.00250 * 180.02562 * 21 20 18 40 40 H 1.09003 * 109.62438 * 291.47577 * 26 17 16 41 41 H 1.08996 * 109.63221 * 170.89512 * 26 17 16 42 42 H 1.09002 * 109.49150 * 307.21241 * 27 14 5 43 43 H 1.08993 * 109.49668 * 67.28824 * 27 14 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 1 3.9557 0.7809 0.8908 7 6 4.1056 0.5916 -1.2296 8 6 4.1004 1.2510 -2.4446 9 6 4.6002 0.6269 -3.5720 10 6 5.0951 -0.6623 -3.4867 11 17 5.7158 -1.4497 -4.9039 12 6 5.0947 -1.3239 -2.2716 13 6 4.6005 -0.6964 -1.1436 14 7 3.9828 2.6837 -0.0002 15 6 5.4435 2.8007 -0.1025 16 6 5.8232 4.2744 -0.2823 17 7 5.2119 5.0506 0.8072 18 6 5.9626 5.9085 1.5659 19 1 5.6629 6.1378 2.5778 20 6 7.1087 6.4837 1.0343 21 7 7.3008 6.4856 -0.2678 22 14 8.3784 7.2547 2.1669 23 1 7.9292 7.1234 3.5762 24 1 9.6805 6.5617 1.9952 25 1 8.5345 8.6923 1.8295 26 6 3.7730 4.8812 1.0600 27 6 3.4741 3.3836 1.1869 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 3.7104 2.2558 -2.5118 32 1 4.6001 1.1437 -4.5203 33 1 5.4805 -2.3303 -2.2045 34 1 4.5997 -1.2129 -0.1951 35 1 5.9040 2.4148 0.8070 36 1 5.7952 2.2272 -0.9602 37 1 5.4510 4.6339 -1.2416 38 1 6.9074 4.3805 -0.2440 39 1 8.1019 6.8872 -0.6393 40 1 3.2037 5.2991 0.2297 41 1 3.5016 5.3885 1.9857 42 1 2.3973 3.2329 1.2644 43 1 3.9618 2.9896 2.0784 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000042132373.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:19:34 Heat of formation + Delta-G solvation = -15.277841 kcal Electronic energy + Delta-G solvation = -27811.393365 eV Core-core repulsion = 23884.123064 eV Total energy + Delta-G solvation = -3927.270301 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 338.118 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -40.91318 -39.41023 -37.98505 -36.58474 -36.35671 -34.58198 -32.20945 -31.20218 -30.49353 -29.97832 -28.46402 -27.12927 -25.13970 -23.10932 -22.86846 -22.57090 -21.90538 -20.42556 -19.14776 -17.75112 -17.21186 -16.75994 -16.69406 -16.43547 -15.68702 -15.34270 -14.82279 -14.35040 -14.25131 -14.09785 -13.75919 -13.59335 -13.47771 -13.39394 -13.13652 -13.02996 -12.79892 -12.34009 -12.13999 -11.68809 -11.62542 -11.45613 -11.35020 -11.08119 -10.91051 -10.88372 -10.76614 -10.63468 -10.42431 -10.17879 -10.02977 -9.71243 -9.56246 -9.09621 -8.66918 -8.50607 -7.99601 -6.66147 -5.77485 -3.18186 0.94788 1.22487 2.00318 2.19626 2.55371 3.37612 3.45677 3.47663 3.50083 4.19362 4.50549 4.51928 4.70432 4.77922 4.82334 4.97332 5.04209 5.11083 5.25678 5.37514 5.38486 5.40597 5.47998 5.56269 5.81933 5.87863 5.93390 6.03812 6.12650 6.14748 6.21356 6.25807 6.39649 6.43732 6.52124 6.68930 6.71679 6.96685 7.22644 7.35352 7.57265 7.66293 7.79335 7.81928 8.44137 9.22153 9.85481 10.44003 11.31496 Molecular weight = 338.12amu Principal moments of inertia in cm(-1) A = 0.010575 B = 0.003798 C = 0.002954 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2647.163231 B = 7370.044055 C = 9477.356282 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.036 3.964 2 O -0.360 6.360 3 C 0.468 3.532 4 O -0.477 6.477 5 C 0.133 3.867 6 H 0.081 0.919 7 C -0.075 4.075 8 C -0.068 4.068 9 C -0.113 4.113 10 C -0.029 4.029 11 Cl -0.077 7.077 12 C -0.115 4.115 13 C -0.088 4.088 14 N -0.510 5.510 15 C 0.035 3.965 16 C 0.181 3.819 17 N -0.596 5.596 18 C -0.251 4.251 19 H 0.066 0.934 20 C 0.002 3.998 21 N -0.903 5.903 22 Si 0.901 3.099 23 H -0.278 1.278 24 H -0.289 1.289 25 H -0.290 1.290 26 C 0.154 3.846 27 C 0.031 3.969 28 H 0.099 0.901 29 H 0.062 0.938 30 H 0.062 0.938 31 H 0.146 0.854 32 H 0.135 0.865 33 H 0.133 0.867 34 H 0.133 0.867 35 H 0.029 0.971 36 H 0.067 0.933 37 H 0.027 0.973 38 H 0.091 0.909 39 H 0.253 0.747 40 H 0.028 0.972 41 H 0.056 0.944 42 H 0.086 0.914 43 H 0.025 0.975 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.981 -18.662 -3.848 21.065 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.276 6.276 3 C 0.309 3.691 4 O -0.362 6.362 5 C 0.023 3.977 6 H 0.098 0.902 7 C -0.075 4.075 8 C -0.087 4.087 9 C -0.132 4.132 10 C -0.056 4.056 11 Cl -0.048 7.048 12 C -0.134 4.134 13 C -0.107 4.107 14 N -0.236 5.236 15 C -0.093 4.093 16 C 0.055 3.945 17 N -0.319 5.319 18 C -0.380 4.380 19 H 0.084 0.916 20 C -0.197 4.197 21 N -0.548 5.548 22 Si 0.731 3.269 23 H -0.203 1.203 24 H -0.216 1.216 25 H -0.217 1.217 26 C 0.027 3.973 27 C -0.098 4.098 28 H 0.117 0.883 29 H 0.081 0.919 30 H 0.081 0.919 31 H 0.164 0.836 32 H 0.153 0.847 33 H 0.151 0.849 34 H 0.151 0.849 35 H 0.047 0.953 36 H 0.085 0.915 37 H 0.045 0.955 38 H 0.109 0.891 39 H 0.063 0.937 40 H 0.046 0.954 41 H 0.074 0.926 42 H 0.104 0.896 43 H 0.043 0.957 Dipole moment (debyes) X Y Z Total from point charges -9.230 -18.099 -4.448 20.798 hybrid contribution 0.936 -0.005 1.093 1.439 sum -8.294 -18.103 -3.355 20.193 Atomic orbital electron populations 1.23234 0.76493 1.03442 1.02574 1.86502 1.23216 1.33520 1.84365 1.23471 0.91374 0.81412 0.72829 1.90637 1.66444 1.35800 1.43277 1.20060 0.87340 0.93377 0.96954 0.90151 1.19428 0.99955 0.94189 0.93972 1.21183 0.96450 1.00432 0.90612 1.21098 0.99157 0.93074 0.99866 1.20988 1.01893 0.94387 0.88319 1.98364 1.86020 1.80456 1.39959 1.20927 1.01171 1.00486 0.90801 1.20949 0.97359 0.93877 0.98512 1.61868 1.13589 1.06330 1.41858 1.23055 0.84270 1.02494 0.99459 1.20847 0.99333 0.83924 0.90382 1.44174 1.02464 1.47362 1.37948 1.19241 1.05107 1.19838 0.93844 0.91602 1.25010 1.00655 0.98645 0.95371 1.70031 1.27383 1.47926 1.09445 0.86242 0.81720 0.78644 0.80293 1.20342 1.21599 1.21732 1.20914 0.86682 0.90975 0.98691 1.22989 1.00195 0.97748 0.88875 0.88280 0.91947 0.91898 0.83634 0.84714 0.84906 0.84947 0.95312 0.91462 0.95453 0.89118 0.93682 0.95395 0.92586 0.89556 0.95662 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.33 10.56 101.05 1.07 1.39 16 2 O -0.36 -4.34 10.48 -39.24 -0.41 -4.75 16 3 C 0.47 6.72 6.91 36.01 0.25 6.97 16 4 O -0.48 -8.04 13.60 -18.75 -0.26 -8.29 16 5 C 0.13 1.88 2.20 -70.01 -0.15 1.73 16 6 H 0.08 1.05 8.00 -51.93 -0.42 0.63 16 7 C -0.07 -0.96 3.57 -104.62 -0.37 -1.34 16 8 C -0.07 -0.91 8.13 -39.59 -0.32 -1.23 16 9 C -0.11 -1.36 9.83 -39.55 -0.39 -1.75 16 10 C -0.03 -0.33 6.32 -39.50 -0.25 -0.58 16 11 Cl -0.08 -0.81 28.96 -51.86 -1.50 -2.31 16 12 C -0.12 -1.20 9.83 -39.55 -0.39 -1.59 16 13 C -0.09 -0.96 9.67 -39.59 -0.38 -1.34 16 14 N -0.51 -8.91 3.65 -229.13 -0.84 -9.74 16 15 C 0.04 0.67 5.23 -3.70 -0.02 0.65 16 16 C 0.18 4.31 5.42 -3.60 -0.02 4.29 16 17 N -0.60 -15.08 3.04 -172.02 -0.52 -15.60 16 18 C -0.25 -6.90 9.63 -15.06 -0.15 -7.04 16 19 H 0.07 1.79 7.88 -52.49 -0.41 1.37 16 20 C 0.00 0.04 4.94 -17.43 -0.09 -0.04 16 21 N -0.90 -26.11 11.15 55.49 0.62 -25.49 16 22 Si 0.90 21.65 29.59 -169.99 -5.03 16.62 16 23 H -0.28 -6.54 7.11 56.52 0.40 -6.14 16 24 H -0.29 -6.95 7.11 56.52 0.40 -6.55 16 25 H -0.29 -7.05 7.11 56.52 0.40 -6.65 16 26 C 0.15 3.37 6.69 -3.61 -0.02 3.34 16 27 C 0.03 0.57 5.22 -3.70 -0.02 0.55 16 28 H 0.10 0.59 8.14 -51.93 -0.42 0.16 16 29 H 0.06 0.55 8.13 -51.93 -0.42 0.12 16 30 H 0.06 0.58 8.13 -51.93 -0.42 0.15 16 31 H 0.15 2.15 7.72 -52.49 -0.41 1.74 16 32 H 0.13 1.44 8.06 -52.49 -0.42 1.01 16 33 H 0.13 1.10 8.06 -52.49 -0.42 0.68 16 34 H 0.13 1.16 8.04 -52.49 -0.42 0.74 16 35 H 0.03 0.56 8.14 -51.93 -0.42 0.13 16 36 H 0.07 1.17 5.94 -51.93 -0.31 0.86 16 37 H 0.03 0.70 8.14 -51.93 -0.42 0.27 16 38 H 0.09 2.39 6.12 -51.93 -0.32 2.07 16 39 H 0.25 7.07 8.31 -40.82 -0.34 6.73 16 40 H 0.03 0.64 8.14 -51.93 -0.42 0.22 16 41 H 0.06 1.18 7.95 -51.93 -0.41 0.77 16 42 H 0.09 1.55 5.24 -51.93 -0.27 1.28 16 43 H 0.03 0.47 8.14 -51.93 -0.42 0.05 16 LS Contribution 364.22 15.07 5.49 5.49 Total: -1.00 -30.80 364.22 -9.61 -40.41 By element: Atomic # 1 Polarization: 5.57 SS G_CDS: -5.91 Total: -0.34 kcal Atomic # 6 Polarization: 5.26 SS G_CDS: -1.26 Total: 4.00 kcal Atomic # 7 Polarization: -50.10 SS G_CDS: -0.74 Total: -50.84 kcal Atomic # 8 Polarization: -12.37 SS G_CDS: -0.67 Total: -13.04 kcal Atomic # 14 Polarization: 21.65 SS G_CDS: -5.03 Total: 16.62 kcal Atomic # 17 Polarization: -0.81 SS G_CDS: -1.50 Total: -2.31 kcal Total LS contribution 5.49 Total: 5.49 kcal Total: -30.80 -9.61 -40.41 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000042132373.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.130 kcal (2) G-P(sol) polarization free energy of solvation -30.796 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.666 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.612 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.408 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.278 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds