Wall clock time and date at job start Tue Mar 31 2020 21:10:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38511 * 120.81344 * 2 1 4 4 C 1.38371 * 119.22772 * 180.23318 * 3 2 1 5 5 Cl 1.73595 * 119.56079 * 179.76926 * 4 3 2 6 6 N 1.31974 * 120.88409 * 359.78703 * 4 3 2 7 7 C 1.31827 * 121.77316 * 359.97438 * 6 4 3 8 8 C 1.38829 * 120.68539 * 359.97438 * 7 6 4 9 9 N 1.40026 * 120.47395 * 179.97438 * 8 7 6 10 10 C 1.34775 * 120.00169 * 340.15467 * 9 8 7 11 11 O 1.21583 * 120.00037 * 354.47484 * 10 9 8 12 12 N 1.34783 * 119.99989 * 174.47474 * 10 9 8 13 13 C 1.46497 * 120.00064 * 179.97438 * 12 10 9 14 14 C 1.53049 * 109.45935 * 275.02925 * 13 12 10 15 15 C 1.53189 * 109.31074 * 178.59893 * 14 13 12 16 16 N 1.46923 * 108.76651 * 54.65779 * 15 14 13 17 17 C 1.36936 * 120.63494 * 126.35830 * 16 15 14 18 18 H 1.08003 * 119.99834 * 333.08885 * 17 16 15 19 19 C 1.38810 * 120.00196 * 153.08764 * 17 16 15 20 20 N 1.31622 * 120.00032 * 344.16011 * 19 17 16 21 21 Si 1.86800 * 120.00032 * 164.16111 * 19 17 16 22 22 H 1.48498 * 109.47299 * 60.00006 * 21 19 17 23 23 H 1.48507 * 109.46998 * 180.02562 * 21 19 17 24 24 H 1.48497 * 109.47004 * 299.99640 * 21 19 17 25 25 C 1.46931 * 118.73735 * 306.38226 * 16 15 14 26 26 C 1.53031 * 109.46349 * 154.97497 * 13 12 10 27 27 H 1.09003 * 109.46907 * 270.23008 * 1 2 3 28 28 H 1.09007 * 109.46868 * 30.22233 * 1 2 3 29 29 H 1.08994 * 109.47282 * 150.22149 * 1 2 3 30 30 H 1.08000 * 120.38374 * 359.97438 * 3 2 1 31 31 H 1.08007 * 119.65407 * 179.97438 * 7 6 4 32 32 H 0.97009 * 119.99858 * 160.14493 * 9 8 7 33 33 H 0.97005 * 119.99771 * 359.72757 * 12 10 9 34 34 H 1.08999 * 109.46088 * 34.99869 * 13 12 10 35 35 H 1.09001 * 109.49583 * 298.56953 * 14 13 12 36 36 H 1.09000 * 109.49491 * 58.66190 * 14 13 12 37 37 H 1.08998 * 109.60028 * 294.86734 * 15 14 13 38 38 H 1.09006 * 109.70055 * 174.50342 * 15 14 13 39 39 H 0.97003 * 120.00292 * 179.97438 * 20 19 17 40 40 H 1.09004 * 109.58304 * 293.82196 * 25 16 15 41 41 H 1.08996 * 109.70405 * 173.46882 * 25 16 15 42 42 H 1.09008 * 109.49721 * 301.33802 * 26 13 12 43 43 H 1.09003 * 109.50008 * 61.39515 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2165 1.1896 0.0000 4 6 3.5997 1.1513 -0.0049 5 17 4.4976 2.6370 -0.0110 6 7 4.2455 0.0004 -0.0054 7 6 3.6079 -1.1534 -0.0007 8 6 2.2203 -1.1960 0.0055 9 7 1.5475 -2.4240 0.0099 10 6 2.1847 -3.5430 -0.3878 11 8 3.3092 -3.4724 -0.8448 12 7 1.5755 -4.7403 -0.2789 13 6 2.2680 -5.9566 -0.7117 14 6 2.0626 -6.1525 -2.2157 15 6 2.8168 -7.4057 -2.6710 16 7 2.3820 -8.5436 -1.8496 17 6 1.9200 -9.6914 -2.4362 18 1 1.4641 -9.6521 -3.4145 19 6 2.0374 -10.9055 -1.7735 20 7 2.8524 -11.0182 -0.7461 21 14 1.0390 -12.3792 -2.3398 22 1 1.3885 -12.7029 -3.7463 23 1 1.3429 -13.5458 -1.4726 24 1 -0.4086 -12.0602 -2.2503 25 6 2.4519 -8.4264 -0.3866 26 6 1.7021 -7.1616 0.0430 27 1 -0.3633 0.0041 1.0277 28 1 -0.3633 0.8881 -0.5173 29 1 -0.3633 -0.8919 -0.5104 30 1 1.6962 2.1360 -0.0004 31 1 4.1709 -2.0751 -0.0016 32 1 0.6227 -2.4694 0.2993 33 1 0.6799 -4.7971 0.0894 34 1 3.3331 -5.8629 -0.4999 35 1 0.9995 -6.2711 -2.4252 36 1 2.4446 -5.2834 -2.7513 37 1 3.8888 -7.2530 -2.5457 38 1 2.5964 -7.6066 -3.7195 39 1 2.9342 -11.8665 -0.2827 40 1 3.4942 -8.3569 -0.0750 41 1 1.9901 -9.2994 0.0745 42 1 1.8275 -7.0108 1.1153 43 1 0.6423 -7.2703 -0.1875 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000766252374.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 21:10:55 Heat of formation + Delta-G solvation = 24.511261 kcal Electronic energy + Delta-G solvation = -26488.692184 eV Core-core repulsion = 22595.440019 eV Total energy + Delta-G solvation = -3893.252165 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 338.125 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -41.35547 -39.80736 -37.71164 -36.86019 -35.54258 -34.65705 -33.73807 -32.25814 -30.50353 -29.93723 -29.20322 -28.17266 -25.23231 -24.04078 -22.64557 -22.29186 -21.94928 -20.96654 -19.61805 -18.72449 -17.88045 -17.01241 -16.85823 -16.55729 -15.60030 -15.45274 -14.90740 -14.78126 -14.54181 -14.22948 -13.80255 -13.65574 -13.59764 -13.58945 -13.27072 -13.06538 -12.83375 -12.45398 -12.37736 -12.05997 -11.54096 -11.52130 -11.14455 -11.07356 -10.89761 -10.75379 -10.56777 -10.38818 -10.25908 -10.09308 -9.88386 -9.78540 -9.77577 -9.63390 -8.95034 -8.51543 -8.33432 -6.74789 -5.83068 -3.25483 0.65516 0.81176 1.60946 2.31684 2.89099 3.35429 3.41362 3.42046 3.44661 3.92117 4.16651 4.27605 4.45696 4.51132 4.59200 4.84312 5.02513 5.20360 5.27984 5.33797 5.35224 5.42374 5.48424 5.51002 5.66207 5.78352 5.82558 5.99221 6.14874 6.22975 6.34846 6.44276 6.48448 6.50608 6.63918 6.74334 6.82207 6.95103 7.27270 7.53165 7.58972 7.72064 7.75874 8.32233 8.40093 9.16596 9.79544 10.35336 11.25531 Molecular weight = 338.13amu Principal moments of inertia in cm(-1) A = 0.032492 B = 0.002005 C = 0.001953 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 861.553314 B =13961.465081 C =14334.446004 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.076 4.076 3 C -0.132 4.132 4 C 0.145 3.855 5 Cl -0.039 7.039 6 N -0.457 5.457 7 C 0.107 3.893 8 C 0.131 3.869 9 N -0.678 5.678 10 C 0.700 3.300 11 O -0.566 6.566 12 N -0.727 5.727 13 C 0.166 3.834 14 C -0.140 4.140 15 C 0.147 3.853 16 N -0.593 5.593 17 C -0.251 4.251 18 H 0.066 0.934 19 C 0.000 4.000 20 N -0.905 5.905 21 Si 0.905 3.095 22 H -0.282 1.282 23 H -0.290 1.290 24 H -0.284 1.284 25 C 0.172 3.828 26 C -0.146 4.146 27 H 0.080 0.920 28 H 0.079 0.921 29 H 0.071 0.929 30 H 0.146 0.854 31 H 0.198 0.802 32 H 0.409 0.591 33 H 0.394 0.606 34 H 0.086 0.914 35 H 0.058 0.942 36 H 0.055 0.945 37 H 0.022 0.978 38 H 0.057 0.943 39 H 0.255 0.745 40 H 0.021 0.979 41 H 0.097 0.903 42 H 0.055 0.945 43 H 0.060 0.940 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.194 23.926 5.049 25.490 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.087 4.087 3 C -0.153 4.153 4 C -0.019 4.019 5 Cl -0.011 7.011 6 N -0.168 5.168 7 C -0.054 4.054 8 C 0.031 3.969 9 N -0.324 5.324 10 C 0.401 3.599 11 O -0.443 6.443 12 N -0.380 5.380 13 C 0.063 3.937 14 C -0.180 4.180 15 C 0.020 3.980 16 N -0.316 5.316 17 C -0.381 4.381 18 H 0.084 0.916 19 C -0.198 4.198 20 N -0.550 5.550 21 Si 0.734 3.266 22 H -0.209 1.209 23 H -0.216 1.216 24 H -0.211 1.211 25 C 0.046 3.954 26 C -0.186 4.186 27 H 0.099 0.901 28 H 0.098 0.902 29 H 0.090 0.910 30 H 0.164 0.836 31 H 0.214 0.786 32 H 0.245 0.755 33 H 0.228 0.772 34 H 0.104 0.896 35 H 0.077 0.923 36 H 0.074 0.926 37 H 0.040 0.960 38 H 0.075 0.925 39 H 0.065 0.935 40 H 0.039 0.961 41 H 0.115 0.885 42 H 0.074 0.926 43 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges -5.148 23.806 4.708 24.808 hybrid contribution -2.215 -0.597 0.046 2.294 sum -7.363 23.210 4.754 24.810 Atomic orbital electron populations 1.20754 0.89306 1.03906 1.03162 1.19931 0.97010 0.90783 1.00978 1.21457 0.92261 0.98950 1.02677 1.21590 0.88816 0.88743 1.02783 1.98391 1.76682 1.29317 1.96695 1.67199 1.40695 0.97123 1.11813 1.23642 0.90314 0.96152 0.95264 1.18584 0.93124 0.84759 1.00407 1.42702 1.16140 1.04994 1.68603 1.16032 0.84731 0.80375 0.78767 1.90853 1.18070 1.84957 1.50386 1.45641 1.19990 1.05345 1.66987 1.21072 0.97055 0.80882 0.94721 1.22407 1.01294 0.99470 0.94878 1.20874 0.95284 0.86716 0.95108 1.44106 1.74285 1.12369 1.00816 1.19165 1.31567 0.84531 1.02831 0.91605 1.25041 0.98325 0.97338 0.99086 1.69988 1.36508 1.24965 1.23506 0.86336 0.80069 0.82122 0.78034 1.20872 1.21620 1.21091 1.20810 0.96594 0.93754 0.84282 1.22570 1.01306 0.96595 0.98169 0.90135 0.90168 0.91035 0.83609 0.78589 0.75515 0.77200 0.89622 0.92339 0.92611 0.96032 0.92497 0.93495 0.96054 0.88459 0.92638 0.92143 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.53 9.54 36.01 0.34 -0.19 16 2 C -0.08 -0.63 5.93 -104.14 -0.62 -1.25 16 3 C -0.13 -1.15 9.58 -39.43 -0.38 -1.52 16 4 C 0.15 1.65 7.27 -17.44 -0.13 1.52 16 5 Cl -0.04 -0.40 29.10 -51.86 -1.51 -1.91 16 6 N -0.46 -6.26 10.33 -10.21 -0.11 -6.36 16 7 C 0.11 1.42 9.96 -17.34 -0.17 1.25 16 8 C 0.13 1.40 6.51 -83.52 -0.54 0.86 16 9 N -0.68 -6.34 5.12 -14.12 -0.07 -6.41 16 10 C 0.70 9.03 8.38 -86.91 -0.73 8.31 16 11 O -0.57 -9.47 12.94 5.29 0.07 -9.40 16 12 N -0.73 -8.76 5.08 -58.64 -0.30 -9.06 16 13 C 0.17 2.64 2.42 -67.89 -0.16 2.47 16 14 C -0.14 -2.40 5.65 -26.61 -0.15 -2.55 16 15 C 0.15 3.05 6.52 -3.71 -0.02 3.02 16 16 N -0.59 -14.31 3.00 -172.32 -0.52 -14.83 16 17 C -0.25 -6.69 9.61 -15.06 -0.14 -6.83 16 18 H 0.07 1.72 7.87 -52.48 -0.41 1.31 16 19 C 0.00 0.01 4.96 -17.43 -0.09 -0.08 16 20 N -0.90 -25.51 11.03 55.49 0.61 -24.90 16 21 Si 0.90 21.13 29.58 -169.99 -5.03 16.10 16 22 H -0.28 -6.57 7.11 56.52 0.40 -6.16 16 23 H -0.29 -6.85 7.11 56.52 0.40 -6.45 16 24 H -0.28 -6.54 7.11 56.52 0.40 -6.14 16 25 C 0.17 3.87 5.31 -3.71 -0.02 3.85 16 26 C -0.15 -2.48 5.55 -26.62 -0.15 -2.62 16 27 H 0.08 0.26 8.14 -51.93 -0.42 -0.16 16 28 H 0.08 0.29 8.10 -51.92 -0.42 -0.13 16 29 H 0.07 0.30 7.01 -51.93 -0.36 -0.06 16 30 H 0.15 0.86 8.06 -52.49 -0.42 0.43 16 31 H 0.20 2.95 5.44 -52.48 -0.29 2.66 16 32 H 0.41 2.38 7.36 -40.82 -0.30 2.08 16 33 H 0.39 3.52 8.62 -40.82 -0.35 3.17 16 34 H 0.09 1.55 7.58 -51.93 -0.39 1.15 16 35 H 0.06 0.99 8.14 -51.93 -0.42 0.57 16 36 H 0.06 0.95 8.14 -51.93 -0.42 0.52 16 37 H 0.02 0.46 8.14 -51.93 -0.42 0.04 16 38 H 0.06 1.16 7.93 -51.93 -0.41 0.75 16 39 H 0.25 6.98 8.31 -40.82 -0.34 6.64 16 40 H 0.02 0.51 8.14 -51.93 -0.42 0.09 16 41 H 0.10 2.45 5.92 -51.93 -0.31 2.15 16 42 H 0.05 0.84 8.14 -51.92 -0.42 0.41 16 43 H 0.06 1.00 8.14 -51.93 -0.42 0.58 16 LS Contribution 363.89 15.07 5.48 5.48 Total: -1.00 -31.51 363.89 -10.09 -41.61 By element: Atomic # 1 Polarization: 9.21 SS G_CDS: -5.77 Total: 3.44 kcal Atomic # 6 Polarization: 9.20 SS G_CDS: -2.96 Total: 6.24 kcal Atomic # 7 Polarization: -61.18 SS G_CDS: -0.38 Total: -61.56 kcal Atomic # 8 Polarization: -9.47 SS G_CDS: 0.07 Total: -9.40 kcal Atomic # 14 Polarization: 21.13 SS G_CDS: -5.03 Total: 16.10 kcal Atomic # 17 Polarization: -0.40 SS G_CDS: -1.51 Total: -1.91 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -31.51 -10.09 -41.61 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000766252374.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 66.116 kcal (2) G-P(sol) polarization free energy of solvation -31.512 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.604 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.093 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.605 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.511 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds