Wall clock time and date at job start Tue Mar 31 2020 21:15:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 N 1.30856 * 125.89535 * 2 1 4 4 N 1.40074 * 108.22465 * 180.29293 * 3 2 1 5 5 C 1.46498 * 126.03786 * 179.69414 * 4 3 2 6 6 C 1.50703 * 109.47447 * 270.02291 * 5 4 3 7 7 O 1.21275 * 119.99598 * 0.02562 * 6 5 4 8 8 N 1.34776 * 120.00003 * 179.97438 * 6 5 4 9 9 C 1.46504 * 119.99661 * 180.02562 * 8 6 5 10 10 H 1.09002 * 115.51583 * 9.41271 * 9 8 6 11 11 C 1.52999 * 117.43992 * 224.00262 * 9 8 6 12 12 H 1.09005 * 119.54190 * 4.11545 * 11 9 8 13 13 C 1.54383 * 118.12457 * 160.80962 * 11 9 8 14 14 N 1.48141 * 104.62127 * 87.18824 * 13 11 9 15 15 C 1.36939 * 127.84060 * 140.41521 * 14 13 11 16 16 H 1.07997 * 119.99828 * 344.89954 * 15 14 13 17 17 C 1.38806 * 119.99977 * 164.90407 * 15 14 13 18 18 N 1.31625 * 120.00295 * 350.65849 * 17 15 14 19 19 Si 1.86802 * 120.00244 * 170.66319 * 17 15 14 20 20 H 1.48502 * 109.47131 * 89.99261 * 19 17 15 21 21 H 1.48491 * 109.47601 * 209.99744 * 19 17 15 22 22 H 1.48501 * 109.46796 * 330.00062 * 19 17 15 23 23 C 1.51692 * 104.54629 * 320.19334 * 14 13 11 24 24 C 1.53000 * 117.44246 * 154.83536 * 9 8 6 25 25 H 1.08996 * 119.53974 * 355.87593 * 24 9 8 26 26 C 1.35046 * 107.93034 * 359.71698 * 4 3 2 27 27 C 1.50696 * 126.14072 * 180.02562 * 26 4 3 28 28 C 1.35379 * 107.72610 * 0.02562 * 26 4 3 29 29 Cl 1.73594 * 126.04852 * 180.02562 * 28 26 4 30 30 H 1.08994 * 109.46882 * 270.17501 * 1 2 3 31 31 H 1.08995 * 109.46860 * 30.17589 * 1 2 3 32 32 H 1.08995 * 109.46855 * 150.17326 * 1 2 3 33 33 H 1.09001 * 109.46968 * 30.02606 * 5 4 3 34 34 H 1.09005 * 109.47353 * 150.02218 * 5 4 3 35 35 H 0.96995 * 120.00055 * 0.02562 * 8 6 5 36 36 H 1.09006 * 110.40894 * 205.97625 * 13 11 9 37 37 H 1.09006 * 110.40524 * 328.39899 * 13 11 9 38 38 H 0.96997 * 120.00321 * 180.02562 * 18 17 15 39 39 H 1.09008 * 111.95721 * 281.12642 * 23 14 13 40 40 H 1.08998 * 110.49689 * 157.55505 * 23 14 13 41 41 H 1.08995 * 109.47572 * 270.01972 * 27 26 4 42 42 H 1.08997 * 109.46843 * 30.02618 * 27 26 4 43 43 H 1.09007 * 109.46863 * 150.02237 * 27 26 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 7 2.2743 1.0600 0.0000 4 7 3.6089 0.6349 -0.0068 5 6 4.7897 1.5020 -0.0154 6 6 5.1861 1.7969 -1.4392 7 8 4.5451 1.3291 -2.3563 8 7 6.2523 2.5812 -1.6931 9 6 6.6373 2.8682 -3.0772 10 1 5.9261 2.5476 -3.8385 11 6 8.1252 2.7921 -3.4255 12 1 8.8384 2.4662 -2.6683 13 6 8.5181 2.6398 -4.9107 14 7 8.5866 4.0279 -5.4235 15 6 9.5010 4.5575 -6.2946 16 1 10.4196 4.0284 -6.5009 17 6 9.2471 5.7743 -6.9123 18 7 8.0585 6.3300 -6.8082 19 14 10.5924 6.6234 -7.8916 20 1 10.5330 6.1751 -9.3061 21 1 10.3967 8.0940 -7.8297 22 1 11.9170 6.2756 -7.3174 23 6 7.4123 4.7332 -4.7720 24 6 7.4169 4.1584 -3.3392 25 1 7.6022 4.8504 -2.5177 26 6 3.6150 -0.7156 -0.0045 27 6 4.8360 -1.5988 -0.0094 28 6 2.3274 -1.1336 0.0029 29 17 1.7892 -2.7840 0.0091 30 1 -0.3633 0.0031 1.0276 31 1 -0.3633 0.8884 -0.5165 32 1 -0.3633 -0.8915 -0.5111 33 1 4.5588 2.4353 0.4982 34 1 5.6124 1.0006 0.4944 35 1 6.7647 2.9555 -0.9596 36 1 9.4897 2.1536 -4.9989 37 1 7.7583 2.0729 -5.4486 38 1 7.8810 7.1802 -7.2402 39 1 6.4708 4.5031 -5.2709 40 1 7.5784 5.8103 -4.7500 41 1 5.1253 -1.8133 -1.0381 42 1 5.6545 -1.0899 0.4998 43 1 4.6113 -2.5322 0.5069 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000962598628.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 21:15:40 Heat of formation + Delta-G solvation = 99.030790 kcal Electronic energy + Delta-G solvation = -26116.543534 eV Core-core repulsion = 22226.522778 eV Total energy + Delta-G solvation = -3890.020756 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 338.125 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -41.74483 -39.88665 -38.32596 -36.61690 -34.54322 -34.42430 -32.80905 -32.19747 -30.53170 -29.82122 -27.31719 -27.21452 -26.59299 -25.41673 -22.24055 -20.96829 -20.75329 -20.46686 -19.71954 -19.29419 -17.59577 -17.35603 -16.87174 -16.13836 -15.71257 -15.50448 -14.78871 -14.62687 -14.26932 -14.18655 -13.69291 -13.58596 -13.53122 -13.29210 -12.84741 -12.79188 -12.75828 -12.54542 -12.28069 -12.26399 -12.01346 -11.60478 -11.53484 -11.45997 -11.05387 -10.86031 -10.66301 -10.51751 -10.31221 -10.26198 -10.15767 -9.72814 -9.41193 -9.27262 -8.80437 -8.55372 -8.47946 -6.92317 -5.82682 -3.16042 1.33905 1.66569 2.29731 2.31898 2.46097 2.97052 3.36225 3.41597 3.43481 4.07026 4.16886 4.23335 4.35125 4.44229 4.52440 4.53675 4.74230 4.98075 5.04370 5.14985 5.25804 5.29771 5.33924 5.38252 5.47271 5.49987 5.59638 5.71326 5.71678 5.80639 5.99650 6.11566 6.18440 6.42943 6.47505 6.62651 6.66593 6.81785 7.24021 7.32281 7.33873 7.46466 7.65535 8.00622 8.10488 9.02512 9.69244 10.45223 11.32370 Molecular weight = 338.13amu Principal moments of inertia in cm(-1) A = 0.027912 B = 0.001964 C = 0.001930 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1002.903429 B =14255.962157 C =14506.968139 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 C 0.095 3.905 3 N -0.273 5.273 4 N -0.349 5.349 5 C 0.116 3.884 6 C 0.497 3.503 7 O -0.516 6.516 8 N -0.692 5.692 9 C 0.093 3.907 10 H 0.132 0.868 11 C -0.180 4.180 12 H 0.104 0.896 13 C 0.158 3.842 14 N -0.598 5.598 15 C -0.226 4.226 16 H 0.077 0.923 17 C -0.007 4.007 18 N -0.916 5.916 19 Si 0.913 3.087 20 H -0.287 1.287 21 H -0.289 1.289 22 H -0.280 1.280 23 C 0.185 3.815 24 C -0.175 4.175 25 H 0.103 0.897 26 C 0.117 3.883 27 C -0.098 4.098 28 C -0.188 4.188 29 Cl -0.044 7.044 30 H 0.080 0.920 31 H 0.078 0.922 32 H 0.081 0.919 33 H 0.130 0.870 34 H 0.125 0.875 35 H 0.400 0.600 36 H 0.052 0.948 37 H 0.026 0.974 38 H 0.255 0.745 39 H 0.032 0.968 40 H 0.092 0.908 41 H 0.090 0.910 42 H 0.074 0.926 43 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.250 -14.382 20.418 26.633 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C -0.073 4.073 3 N -0.094 5.094 4 N -0.130 5.130 5 C -0.009 4.009 6 C 0.280 3.720 7 O -0.390 6.390 8 N -0.342 5.342 9 C -0.012 4.012 10 H 0.149 0.851 11 C -0.201 4.201 12 H 0.122 0.878 13 C 0.031 3.969 14 N -0.322 5.322 15 C -0.354 4.354 16 H 0.095 0.905 17 C -0.204 4.204 18 N -0.563 5.563 19 Si 0.743 3.257 20 H -0.214 1.214 21 H -0.216 1.216 22 H -0.206 1.206 23 C 0.060 3.940 24 C -0.197 4.197 25 H 0.121 0.879 26 C -0.011 4.011 27 C -0.156 4.156 28 C -0.226 4.226 29 Cl -0.016 7.016 30 H 0.099 0.901 31 H 0.097 0.903 32 H 0.100 0.900 33 H 0.147 0.853 34 H 0.143 0.857 35 H 0.234 0.766 36 H 0.071 0.929 37 H 0.044 0.956 38 H 0.065 0.935 39 H 0.050 0.950 40 H 0.111 0.889 41 H 0.108 0.892 42 H 0.093 0.907 43 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -9.542 -13.284 19.567 25.502 hybrid contribution 1.024 -0.203 -0.102 1.049 sum -8.518 -13.486 19.465 25.166 Atomic orbital electron populations 1.20233 0.85897 1.03908 1.03276 1.22260 0.97351 0.88854 0.98839 1.77480 0.85598 1.21509 1.24794 1.47540 1.04995 1.03272 1.57192 1.21513 0.85866 0.97248 0.96300 1.20645 0.80884 0.79439 0.91034 1.90799 1.51928 1.50403 1.45872 1.45293 1.30090 1.50333 1.08501 1.21917 0.94419 1.01899 0.82978 0.85077 1.24372 0.93277 1.02287 1.00208 0.87827 1.21065 0.98290 0.88763 0.88793 1.46031 1.30944 1.03796 1.51451 1.18994 0.96295 1.03117 1.17003 0.90513 1.24882 0.96739 0.99199 0.99561 1.69882 1.19620 1.19088 1.47690 0.86118 0.80951 0.78794 0.79860 1.21444 1.21557 1.20606 1.21687 0.89667 0.98703 0.83945 1.24583 1.02694 0.90048 1.02335 0.87913 1.20669 0.96316 0.84691 0.99449 1.20564 0.92406 0.98235 1.04377 1.20245 0.92008 0.86909 1.23441 1.98301 1.89767 1.15663 1.97834 0.90144 0.90334 0.90044 0.85263 0.85727 0.76562 0.92926 0.95648 0.93516 0.94976 0.88947 0.89176 0.90736 0.89094 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.64 10.31 36.01 0.37 -0.27 16 2 C 0.09 1.14 7.22 -82.37 -0.59 0.55 16 3 N -0.27 -3.71 12.57 33.69 0.42 -3.28 16 4 N -0.35 -4.09 3.10 -58.27 -0.18 -4.27 16 5 C 0.12 0.99 6.73 -5.19 -0.03 0.95 16 6 C 0.50 6.24 7.90 -10.98 -0.09 6.15 16 7 O -0.52 -9.20 16.00 5.56 0.09 -9.11 16 8 N -0.69 -8.01 5.56 -53.80 -0.30 -8.31 16 9 C 0.09 1.48 5.97 -67.93 -0.41 1.08 16 10 H 0.13 2.46 7.40 -51.93 -0.38 2.08 16 11 C -0.18 -3.02 7.05 -89.30 -0.63 -3.65 16 12 H 0.10 1.50 8.14 -51.93 -0.42 1.08 16 13 C 0.16 3.25 7.05 -2.41 -0.02 3.23 16 14 N -0.60 -15.07 3.45 -165.83 -0.57 -15.65 16 15 C -0.23 -6.22 10.36 -15.06 -0.16 -6.37 16 16 H 0.08 2.04 7.85 -52.49 -0.41 1.62 16 17 C -0.01 -0.19 5.41 -17.43 -0.09 -0.28 16 18 N -0.92 -26.64 10.84 55.49 0.60 -26.04 16 19 Si 0.91 21.73 29.56 -169.99 -5.03 16.70 16 20 H -0.29 -6.85 7.11 56.52 0.40 -6.45 16 21 H -0.29 -6.93 7.11 56.52 0.40 -6.53 16 22 H -0.28 -6.50 7.11 56.52 0.40 -6.09 16 23 C 0.18 4.34 5.91 -0.38 0.00 4.33 16 24 C -0.18 -3.13 6.96 -89.30 -0.62 -3.75 16 25 H 0.10 1.64 8.14 -51.93 -0.42 1.22 16 26 C 0.12 1.28 6.94 -82.20 -0.57 0.71 16 27 C -0.10 -0.74 9.95 36.00 0.36 -0.38 16 28 C -0.19 -2.17 6.63 -39.97 -0.27 -2.44 16 29 Cl -0.04 -0.43 28.58 -51.86 -1.48 -1.91 16 30 H 0.08 0.55 8.14 -51.93 -0.42 0.13 16 31 H 0.08 0.66 8.14 -51.93 -0.42 0.24 16 32 H 0.08 0.62 8.01 -51.93 -0.42 0.21 16 33 H 0.13 0.83 8.14 -51.93 -0.42 0.41 16 34 H 0.12 0.55 7.05 -51.93 -0.37 0.19 16 35 H 0.40 3.17 8.83 -40.82 -0.36 2.81 16 36 H 0.05 1.03 8.14 -51.93 -0.42 0.61 16 37 H 0.03 0.54 8.14 -51.93 -0.42 0.12 16 38 H 0.25 7.17 8.31 -40.82 -0.34 6.83 16 39 H 0.03 0.80 8.14 -51.92 -0.42 0.38 16 40 H 0.09 2.41 6.58 -51.93 -0.34 2.07 16 41 H 0.09 0.74 8.14 -51.93 -0.42 0.32 16 42 H 0.07 0.39 7.09 -51.93 -0.37 0.02 16 43 H 0.09 0.57 7.91 -51.92 -0.41 0.16 16 LS Contribution 377.68 15.07 5.69 5.69 Total: -1.00 -35.38 377.68 -9.50 -44.89 By element: Atomic # 1 Polarization: 7.42 SS G_CDS: -6.00 Total: 1.42 kcal Atomic # 6 Polarization: 2.62 SS G_CDS: -2.75 Total: -0.13 kcal Atomic # 7 Polarization: -57.52 SS G_CDS: -0.03 Total: -57.55 kcal Atomic # 8 Polarization: -9.20 SS G_CDS: 0.09 Total: -9.11 kcal Atomic # 14 Polarization: 21.73 SS G_CDS: -5.03 Total: 16.70 kcal Atomic # 17 Polarization: -0.43 SS G_CDS: -1.48 Total: -1.91 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -35.38 -9.50 -44.89 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000962598628.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 143.917 kcal (2) G-P(sol) polarization free energy of solvation -35.385 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 108.532 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.501 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.886 kcal (6) G-S(sol) free energy of system = (1) + (5) 99.031 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds