Wall clock time and date at job start Tue Mar 31 2020 21:16:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 N 1.34235 * 126.28487 * 2 1 4 4 H 0.97002 * 125.73457 * 359.97438 * 3 2 1 5 5 N 1.39936 * 108.52502 * 180.29809 * 3 2 1 6 6 C 1.30526 * 108.89230 * 359.72533 * 5 3 2 7 7 Cl 1.73596 * 126.00318 * 180.02562 * 6 5 3 8 8 C 1.38072 * 126.28077 * 179.84620 * 2 1 3 9 9 C 1.47382 * 126.42085 * 359.96206 * 8 2 1 10 10 O 1.21607 * 120.00302 * 269.71339 * 9 8 2 11 11 N 1.34779 * 119.99780 * 89.99473 * 9 8 2 12 12 C 1.47194 * 135.99663 * 359.35338 * 11 9 8 13 13 C 1.53207 * 87.73397 * 153.42848 * 12 11 9 14 14 C 1.47147 * 135.99743 * 179.72398 * 11 9 8 15 15 C 1.52509 * 114.05532 * 139.66560 * 13 12 11 16 16 C 1.53199 * 109.36500 * 190.02437 * 15 13 12 17 17 C 1.53153 * 109.35644 * 301.10614 * 16 15 13 18 18 N 1.46899 * 109.07134 * 56.57505 * 17 16 15 19 19 C 1.36944 * 120.69989 * 124.52216 * 18 17 16 20 20 H 1.08000 * 119.99621 * 332.83190 * 19 18 17 21 21 C 1.38809 * 120.00208 * 152.82798 * 19 18 17 22 22 N 1.31620 * 120.00042 * 343.31067 * 21 19 18 23 23 Si 1.86803 * 119.99989 * 163.30403 * 21 19 18 24 24 H 1.48505 * 109.46655 * 90.00229 * 23 21 19 25 25 H 1.48497 * 109.47313 * 210.00086 * 23 21 19 26 26 H 1.48499 * 109.47026 * 330.00586 * 23 21 19 27 27 C 1.47137 * 118.60683 * 304.53927 * 18 17 16 28 28 H 1.08994 * 109.47402 * 270.15747 * 1 2 3 29 29 H 1.08999 * 109.46794 * 30.15596 * 1 2 3 30 30 H 1.08997 * 109.47483 * 150.15236 * 1 2 3 31 31 H 1.09003 * 113.49410 * 268.11637 * 12 11 9 32 32 H 1.09000 * 113.49411 * 38.63041 * 12 11 9 33 33 H 1.09001 * 113.48940 * 321.37215 * 14 11 9 34 34 H 1.09005 * 113.49050 * 91.81616 * 14 11 9 35 35 H 1.09001 * 109.48885 * 309.98915 * 15 13 12 36 36 H 1.08998 * 109.49165 * 70.05515 * 15 13 12 37 37 H 1.09002 * 109.48811 * 181.14614 * 16 15 13 38 38 H 1.08992 * 109.49231 * 61.07337 * 16 15 13 39 39 H 1.08991 * 109.53751 * 296.69543 * 17 16 15 40 40 H 1.08997 * 109.53335 * 176.44581 * 17 16 15 41 41 H 0.97001 * 119.99931 * 180.02562 * 22 21 19 42 42 H 1.09006 * 109.63755 * 291.52765 * 27 18 17 43 43 H 1.09001 * 109.80709 * 171.01780 * 27 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 7 2.3013 1.0821 0.0000 4 1 2.0019 2.0047 -0.0004 5 7 3.6340 0.6552 -0.0069 6 6 3.6598 -0.6498 -0.0051 7 17 5.0841 -1.6423 -0.0111 8 6 2.3240 -1.1130 0.0030 9 6 1.8857 -2.5202 0.0076 10 8 1.7105 -3.0991 1.0625 11 7 1.6846 -3.1671 -1.1576 12 6 1.7786 -2.8280 -2.5869 13 6 2.0459 -4.3118 -2.8590 14 6 1.2685 -4.5203 -1.5588 15 6 1.3443 -4.8524 -4.1005 16 6 1.4749 -6.3784 -4.1339 17 6 2.9579 -6.7608 -4.1471 18 7 3.6176 -6.1652 -2.9775 19 6 4.3112 -6.9470 -2.0925 20 1 4.0444 -7.9858 -1.9656 21 6 5.3571 -6.4044 -1.3588 22 7 5.8990 -5.2637 -1.7298 23 14 5.9954 -7.2929 0.1553 24 1 7.0834 -8.2236 -0.2389 25 1 6.5209 -6.3004 1.1269 26 1 4.8895 -8.0610 0.7815 27 6 3.5172 -4.7111 -2.7764 28 1 -0.3634 0.0028 1.0276 29 1 -0.3633 0.8886 -0.5163 30 1 -0.3634 -0.8913 -0.5114 31 1 0.8404 -2.4706 -3.0113 32 1 2.6234 -2.1817 -2.8255 33 1 1.6813 -5.3069 -0.9272 34 1 0.1929 -4.6184 -1.7057 35 1 0.2897 -4.5782 -4.0706 36 1 1.8054 -4.4283 -4.9925 37 1 0.9917 -6.7652 -5.0311 38 1 0.9976 -6.8037 -3.2512 39 1 3.4230 -6.3852 -5.0585 40 1 3.0549 -7.8457 -4.1072 41 1 6.6301 -4.8847 -1.2173 42 1 4.0812 -4.1942 -3.5528 43 1 3.9144 -4.4454 -1.7968 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000981803962.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 21:16:20 Heat of formation + Delta-G solvation = 95.299180 kcal Electronic energy + Delta-G solvation = -28469.376247 eV Core-core repulsion = 24579.193677 eV Total energy + Delta-G solvation = -3890.182571 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 338.125 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -41.55845 -40.26688 -37.79685 -36.54996 -35.70511 -32.91140 -32.80936 -31.51509 -30.25188 -29.59431 -27.74746 -25.88721 -25.63388 -25.27454 -22.29312 -22.04128 -21.90374 -20.53821 -18.84785 -17.88204 -17.61324 -16.65169 -16.41490 -15.60489 -15.20008 -15.14584 -15.11461 -14.70160 -14.04538 -13.87906 -13.55029 -13.34408 -13.33031 -13.02052 -12.86890 -12.72032 -12.44120 -12.13980 -11.91507 -11.78699 -11.62923 -11.48275 -11.23183 -10.87783 -10.66653 -10.60666 -10.40996 -10.20854 -10.05922 -9.84227 -9.78239 -9.42458 -9.40593 -9.33683 -8.79039 -8.40211 -8.25285 -6.63172 -5.73014 -3.13748 1.42999 1.62478 2.18817 2.80835 2.89406 3.34827 3.44319 3.53427 3.54897 4.32823 4.54590 4.64117 4.71241 4.78939 5.09356 5.13112 5.32178 5.40068 5.48473 5.50437 5.54305 5.61432 5.66889 5.72477 5.80429 5.83545 5.87309 6.00434 6.22002 6.27967 6.33883 6.44226 6.54245 6.63237 6.79351 6.85464 6.87350 7.01294 7.21029 7.34086 7.70530 7.86891 8.13596 8.49589 8.53218 9.26538 9.90647 10.46178 11.35237 Molecular weight = 338.13amu Principal moments of inertia in cm(-1) A = 0.011339 B = 0.005324 C = 0.004172 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2468.826478 B = 5258.133750 C = 6709.302923 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.133 3.867 3 N -0.452 5.452 4 H 0.445 0.555 5 N -0.281 5.281 6 C 0.158 3.842 7 Cl 0.045 6.955 8 C -0.254 4.254 9 C 0.624 3.376 10 O -0.534 6.534 11 N -0.626 5.626 12 C 0.106 3.894 13 C -0.110 4.110 14 C 0.120 3.880 15 C -0.091 4.091 16 C -0.134 4.134 17 C 0.144 3.856 18 N -0.589 5.589 19 C -0.254 4.254 20 H 0.064 0.936 21 C 0.010 3.990 22 N -0.895 5.895 23 Si 0.893 3.107 24 H -0.288 1.288 25 H -0.289 1.289 26 H -0.279 1.279 27 C 0.200 3.800 28 H 0.090 0.910 29 H 0.080 0.920 30 H 0.090 0.910 31 H 0.077 0.923 32 H 0.074 0.926 33 H 0.086 0.914 34 H 0.072 0.928 35 H 0.050 0.950 36 H 0.061 0.939 37 H 0.050 0.950 38 H 0.058 0.942 39 H 0.017 0.983 40 H 0.052 0.948 41 H 0.252 0.748 42 H 0.022 0.978 43 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.824 12.581 -2.484 18.136 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.001 3.999 3 N -0.162 5.162 4 H 0.291 0.709 5 N -0.106 5.106 6 C -0.034 4.034 7 Cl 0.073 6.927 8 C -0.270 4.270 9 C 0.411 3.589 10 O -0.410 6.410 11 N -0.359 5.359 12 C -0.018 4.018 13 C -0.113 4.113 14 C -0.002 4.002 15 C -0.129 4.129 16 C -0.173 4.173 17 C 0.018 3.982 18 N -0.311 5.311 19 C -0.384 4.384 20 H 0.082 0.918 21 C -0.189 4.189 22 N -0.539 5.539 23 Si 0.723 3.277 24 H -0.215 1.215 25 H -0.215 1.215 26 H -0.204 1.204 27 C 0.074 3.926 28 H 0.109 0.891 29 H 0.099 0.901 30 H 0.108 0.892 31 H 0.095 0.905 32 H 0.092 0.908 33 H 0.105 0.895 34 H 0.090 0.910 35 H 0.068 0.932 36 H 0.079 0.921 37 H 0.069 0.931 38 H 0.077 0.923 39 H 0.035 0.965 40 H 0.071 0.929 41 H 0.062 0.938 42 H 0.040 0.960 43 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -11.859 13.379 -1.608 17.950 hybrid contribution -0.022 -0.514 0.787 0.940 sum -11.881 12.865 -0.822 17.531 Atomic orbital electron populations 1.20564 0.85950 1.04526 1.04374 1.21317 0.94635 0.86119 0.97783 1.45788 1.03255 1.08349 1.58779 0.70903 1.77169 0.96131 1.10919 1.26402 1.22860 0.89970 0.90471 1.00145 1.98518 1.34159 1.63627 1.96390 1.19784 0.91326 0.94250 1.21607 1.16481 0.76773 0.83656 0.81972 1.90789 1.52362 1.67678 1.30216 1.49408 1.66308 1.15261 1.04952 1.23134 1.00776 0.98579 0.79299 1.22766 1.01600 0.92970 0.93939 1.22967 0.97945 0.84555 0.94778 1.21213 0.98266 0.96628 0.96815 1.22026 0.99790 0.95088 1.00424 1.20878 0.90144 0.96932 0.90243 1.44001 1.59785 1.03107 1.24193 1.19083 1.09133 0.94404 1.15734 0.91781 1.24945 0.96074 0.97726 1.00184 1.70001 1.24938 1.20225 1.38705 0.86445 0.78770 0.78963 0.83560 1.21489 1.21522 1.20410 1.20456 0.85820 0.83832 1.02472 0.89110 0.90129 0.89151 0.90543 0.90755 0.89506 0.91019 0.93157 0.92050 0.93083 0.92284 0.96509 0.92901 0.93841 0.95972 0.88553 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.73 10.25 36.00 0.37 -0.36 16 2 C 0.13 1.58 7.29 -81.61 -0.60 0.98 16 3 N -0.45 -4.88 7.28 33.86 0.25 -4.63 16 4 H 0.45 2.80 8.96 -182.72 -1.64 1.17 16 5 N -0.28 -4.24 12.64 33.17 0.42 -3.82 16 6 C 0.16 2.74 7.89 -16.91 -0.13 2.60 16 7 Cl 0.05 0.87 29.19 -51.86 -1.51 -0.65 16 8 C -0.25 -4.19 5.70 -105.04 -0.60 -4.79 16 9 C 0.62 11.94 7.42 -12.54 -0.09 11.84 16 10 O -0.53 -12.20 17.88 5.27 0.09 -12.11 16 11 N -0.63 -11.01 3.48 -186.23 -0.65 -11.66 16 12 C 0.11 1.58 7.58 -8.03 -0.06 1.52 16 13 C -0.11 -1.89 0.96 -154.87 -0.15 -2.04 16 14 C 0.12 2.10 7.54 -8.21 -0.06 2.04 16 15 C -0.09 -1.32 5.11 -26.88 -0.14 -1.46 16 16 C -0.13 -2.11 6.03 -26.55 -0.16 -2.27 16 17 C 0.14 2.87 6.46 -3.75 -0.02 2.84 16 18 N -0.59 -14.14 3.01 -172.51 -0.52 -14.66 16 19 C -0.25 -6.87 9.60 -15.06 -0.14 -7.01 16 20 H 0.06 1.72 7.88 -52.49 -0.41 1.30 16 21 C 0.01 0.27 4.93 -17.43 -0.09 0.19 16 22 N -0.89 -25.54 11.16 55.49 0.62 -24.92 16 23 Si 0.89 22.46 29.59 -169.99 -5.03 17.43 16 24 H -0.29 -7.16 7.11 56.52 0.40 -6.75 16 25 H -0.29 -7.45 7.11 56.52 0.40 -7.05 16 26 H -0.28 -6.96 7.11 56.52 0.40 -6.56 16 27 C 0.20 4.53 4.42 -3.86 -0.02 4.51 16 28 H 0.09 0.63 8.14 -51.93 -0.42 0.21 16 29 H 0.08 0.35 8.14 -51.93 -0.42 -0.07 16 30 H 0.09 0.76 7.96 -51.93 -0.41 0.35 16 31 H 0.08 0.88 8.10 -51.93 -0.42 0.46 16 32 H 0.07 1.16 8.12 -51.93 -0.42 0.73 16 33 H 0.09 1.84 8.11 -51.93 -0.42 1.42 16 34 H 0.07 1.05 8.06 -51.93 -0.42 0.63 16 35 H 0.05 0.61 8.09 -51.93 -0.42 0.19 16 36 H 0.06 0.87 8.14 -51.93 -0.42 0.45 16 37 H 0.05 0.68 8.14 -51.93 -0.42 0.26 16 38 H 0.06 0.97 8.03 -51.93 -0.42 0.55 16 39 H 0.02 0.34 8.14 -51.93 -0.42 -0.08 16 40 H 0.05 1.04 7.93 -51.93 -0.41 0.63 16 41 H 0.25 7.10 8.31 -40.82 -0.34 6.76 16 42 H 0.02 0.54 8.14 -51.93 -0.42 0.12 16 43 H 0.10 2.53 5.94 -51.93 -0.31 2.22 16 LS Contribution 371.06 15.07 5.59 5.59 Total: -1.00 -33.88 371.06 -10.01 -43.89 By element: Atomic # 1 Polarization: 4.31 SS G_CDS: -7.38 Total: -3.06 kcal Atomic # 6 Polarization: 10.48 SS G_CDS: -1.89 Total: 8.59 kcal Atomic # 7 Polarization: -59.80 SS G_CDS: 0.12 Total: -59.68 kcal Atomic # 8 Polarization: -12.20 SS G_CDS: 0.09 Total: -12.11 kcal Atomic # 14 Polarization: 22.46 SS G_CDS: -5.03 Total: 17.43 kcal Atomic # 17 Polarization: 0.87 SS G_CDS: -1.51 Total: -0.65 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -33.88 -10.01 -43.89 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000981803962.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 139.185 kcal (2) G-P(sol) polarization free energy of solvation -33.880 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 105.305 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.005 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.886 kcal (6) G-S(sol) free energy of system = (1) + (5) 95.299 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds