Wall clock time and date at job start Tue Mar 31 2020 21:10:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 N 1.46499 * 110.64210 * 2 1 4 4 C 1.34776 * 120.00246 * 300.70722 * 3 2 1 5 5 O 1.21574 * 120.00393 * 359.97438 * 4 3 2 6 6 C 1.47670 * 119.99882 * 180.02562 * 4 3 2 7 7 N 1.31821 * 126.46282 * 0.02562 * 6 4 3 8 8 N 1.28475 * 110.13468 * 179.70376 * 7 6 4 9 9 H 0.96998 * 124.93394 * 180.28944 * 8 7 6 10 10 C 1.35643 * 110.13063 * 0.45717 * 8 7 6 11 11 C 1.50692 * 126.43029 * 179.81339 * 10 8 7 12 12 C 1.53000 * 117.50104 * 59.69309 * 11 10 8 13 13 C 1.53002 * 60.02940 * 252.47218 * 12 11 10 14 14 C 1.35459 * 107.13020 * 359.55580 * 10 8 7 15 15 Cl 1.73600 * 127.23719 * 180.26301 * 14 10 8 16 16 C 1.55147 * 110.72088 * 123.14713 * 2 1 3 17 17 C 1.55385 * 101.36950 * 153.94459 * 16 2 1 18 18 N 1.47432 * 104.87233 * 323.01818 * 17 16 2 19 19 C 1.36935 * 125.64537 * 204.09750 * 18 17 16 20 20 H 1.07998 * 119.99570 * 180.02562 * 19 18 17 21 21 C 1.38808 * 120.00397 * 0.03461 * 19 18 17 22 22 N 1.31621 * 120.00007 * 0.02562 * 21 19 18 23 23 Si 1.86798 * 120.00184 * 180.02562 * 21 19 18 24 24 H 1.48500 * 109.46995 * 90.00519 * 23 21 19 25 25 H 1.48496 * 109.47184 * 210.00153 * 23 21 19 26 26 H 1.48495 * 109.47218 * 330.00521 * 23 21 19 27 27 C 1.47019 * 108.70141 * 24.13111 * 18 17 16 28 28 H 1.09004 * 109.47318 * 59.29046 * 1 2 3 29 29 H 1.09000 * 109.47172 * 179.29745 * 1 2 3 30 30 H 1.09000 * 109.47074 * 299.29444 * 1 2 3 31 31 H 0.97001 * 119.99961 * 120.69587 * 3 2 1 32 32 H 1.09008 * 115.54779 * 205.35923 * 11 10 8 33 33 H 1.09002 * 117.49833 * 359.97323 * 12 11 10 34 34 H 1.09002 * 117.49953 * 144.97364 * 12 11 10 35 35 H 1.09000 * 117.49996 * 107.50493 * 13 12 11 36 36 H 1.08999 * 117.49664 * 252.51862 * 13 12 11 37 37 H 1.09007 * 111.00474 * 272.11480 * 16 2 1 38 38 H 1.09003 * 111.00763 * 35.96340 * 16 2 1 39 39 H 1.08997 * 110.34842 * 204.16341 * 17 16 2 40 40 H 1.09009 * 110.44196 * 81.91342 * 17 16 2 41 41 H 0.97002 * 120.00332 * 179.97438 * 22 21 19 42 42 H 1.09002 * 109.88085 * 239.52425 * 27 18 17 43 43 H 1.08991 * 110.01255 * 118.43440 * 27 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0465 1.3709 0.0000 4 6 1.7263 2.2117 -1.0035 5 8 1.0093 1.8324 -1.9091 6 6 2.2474 3.5934 -1.0037 7 7 3.0310 4.1353 -0.0927 8 7 3.2983 5.3521 -0.4065 9 1 3.8599 5.9490 0.1124 10 6 2.6780 5.6821 -1.5668 11 6 2.7376 7.0159 -2.2655 12 6 4.1131 7.5237 -2.7027 13 6 3.3980 8.1772 -1.5184 14 6 1.9998 4.5856 -1.9824 15 17 1.0310 4.4300 -3.4145 16 6 2.0789 -0.7935 1.2150 17 6 3.4673 -1.2456 0.6836 18 7 3.2470 -1.5461 -0.7429 19 6 4.0076 -2.3900 -1.5074 20 1 3.7632 -2.5437 -2.5480 21 6 5.0926 -3.0481 -0.9448 22 7 5.3901 -2.8614 0.3237 23 14 6.1305 -4.1987 -1.9879 24 1 7.2372 -3.4339 -2.6167 25 1 6.6951 -5.2711 -1.1297 26 1 5.2845 -4.8059 -3.0465 27 6 2.0760 -0.7890 -1.2087 28 1 -0.3634 0.5248 -0.8836 29 1 -0.3633 -1.0276 -0.0126 30 1 -0.3633 0.5028 0.8962 31 1 2.6187 1.6736 0.7224 32 1 1.8878 7.2487 -2.9073 33 1 4.9750 6.8931 -2.4845 34 1 4.1683 8.0903 -3.6322 35 1 3.7895 7.9767 -0.5211 36 1 2.9825 9.1736 -1.6689 37 1 2.1821 -0.1491 2.0881 38 1 1.4469 -1.6530 1.4382 39 1 3.8031 -2.1379 1.2118 40 1 4.1969 -0.4432 0.7939 41 1 6.1480 -3.3215 0.7170 42 1 1.3140 -1.4752 -1.5782 43 1 2.3685 -0.0992 -2.0002 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001046445085.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 21:10:18 Heat of formation + Delta-G solvation = 91.572220 kcal Electronic energy + Delta-G solvation = -27218.433825 eV Core-core repulsion = 23328.089641 eV Total energy + Delta-G solvation = -3890.344184 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 338.125 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.99043 -39.65243 -37.69086 -37.12568 -36.47714 -33.93249 -32.32907 -31.47717 -30.71769 -29.74046 -28.56887 -25.62097 -24.65776 -23.83386 -23.21800 -22.89452 -21.34915 -20.41171 -19.97853 -18.89300 -18.14248 -17.12141 -16.61408 -16.25190 -15.95620 -15.44698 -14.91663 -14.60755 -14.38503 -14.29841 -13.93512 -13.61908 -13.11578 -12.79009 -12.68057 -12.18094 -12.14726 -12.13001 -11.93800 -11.66836 -11.59370 -11.48195 -11.38943 -11.06274 -10.88136 -10.81329 -10.67464 -10.33478 -10.27714 -10.03574 -9.90460 -9.61585 -9.49646 -9.30483 -8.85225 -8.58990 -8.52853 -6.73885 -5.58614 -2.98581 1.34567 1.64823 1.91709 2.71362 3.31283 3.36739 3.45077 3.49880 3.52075 3.58559 3.96573 4.19010 4.34403 4.42978 4.55675 4.57172 4.99084 5.04922 5.20468 5.26164 5.35623 5.46376 5.47883 5.56029 5.57637 5.64705 5.76333 5.82129 6.11869 6.25146 6.30470 6.43223 6.53159 6.55760 6.60845 6.78811 6.91451 7.21205 7.46879 7.53737 7.70373 7.87847 7.96669 8.41981 8.55676 9.29951 9.90763 10.56051 11.45705 Molecular weight = 338.13amu Principal moments of inertia in cm(-1) A = 0.014074 B = 0.003080 C = 0.002905 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1989.077305 B = 9088.954573 C = 9636.493979 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C 0.160 3.840 3 N -0.692 5.692 4 C 0.599 3.401 5 O -0.513 6.513 6 C 0.014 3.986 7 N -0.240 5.240 8 N -0.376 5.376 9 H 0.448 0.552 10 C 0.057 3.943 11 C -0.090 4.090 12 C -0.163 4.163 13 C -0.175 4.175 14 C -0.094 4.094 15 Cl -0.005 7.005 16 C -0.147 4.147 17 C 0.153 3.847 18 N -0.604 5.604 19 C -0.215 4.215 20 H 0.077 0.923 21 C -0.014 4.014 22 N -0.925 5.925 23 Si 0.914 3.086 24 H -0.290 1.290 25 H -0.291 1.291 26 H -0.281 1.281 27 C 0.137 3.863 28 H 0.074 0.926 29 H 0.064 0.936 30 H 0.049 0.951 31 H 0.403 0.597 32 H 0.135 0.865 33 H 0.099 0.901 34 H 0.108 0.892 35 H 0.092 0.908 36 H 0.108 0.892 37 H 0.063 0.937 38 H 0.077 0.923 39 H 0.108 0.892 40 H 0.011 0.989 41 H 0.250 0.750 42 H 0.031 0.969 43 H 0.034 0.966 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.353 23.228 0.285 24.083 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C 0.074 3.926 3 N -0.343 5.343 4 C 0.381 3.619 5 O -0.387 6.387 6 C -0.148 4.148 7 N -0.075 5.075 8 N -0.092 5.092 9 H 0.294 0.706 10 C -0.069 4.069 11 C -0.110 4.110 12 C -0.201 4.201 13 C -0.212 4.212 14 C -0.131 4.131 15 Cl 0.024 6.976 16 C -0.186 4.186 17 C 0.028 3.972 18 N -0.330 5.330 19 C -0.343 4.343 20 H 0.095 0.905 21 C -0.209 4.209 22 N -0.574 5.574 23 Si 0.745 3.255 24 H -0.218 1.218 25 H -0.217 1.217 26 H -0.207 1.207 27 C 0.010 3.990 28 H 0.093 0.907 29 H 0.083 0.917 30 H 0.068 0.932 31 H 0.238 0.762 32 H 0.153 0.847 33 H 0.117 0.883 34 H 0.126 0.874 35 H 0.110 0.890 36 H 0.127 0.873 37 H 0.082 0.918 38 H 0.096 0.904 39 H 0.125 0.875 40 H 0.029 0.971 41 H 0.061 0.939 42 H 0.049 0.951 43 H 0.051 0.949 Dipole moment (debyes) X Y Z Total from point charges -6.269 22.462 0.503 23.326 hybrid contribution 0.853 0.191 -0.706 1.124 sum -5.416 22.654 -0.203 23.293 Atomic orbital electron populations 1.22060 0.94108 1.02328 1.02447 1.21392 0.93100 0.79951 0.98138 1.45824 1.51210 1.12128 1.25141 1.16680 0.80645 0.81865 0.82666 1.90801 1.36812 1.75637 1.35407 1.22086 1.02067 0.96847 0.93835 1.73709 1.15930 0.93870 1.23976 1.43121 1.38027 1.09760 1.18267 0.70599 1.20097 1.00139 0.96099 0.90569 1.20513 0.99235 0.88253 1.02965 1.23130 0.94487 1.02927 0.99510 1.23052 1.03833 0.97457 0.96840 1.20383 1.04418 0.93584 0.94714 1.98359 1.68106 1.97689 1.33470 1.23433 1.01276 0.98800 0.95050 1.22017 0.89315 1.00603 0.85237 1.44497 1.30552 1.50492 1.07456 1.19100 1.05873 1.16404 0.92929 0.90541 1.24753 0.98816 1.00871 0.96464 1.69781 1.30014 1.46704 1.10949 0.86072 0.80266 0.80236 0.78975 1.21791 1.21732 1.20696 1.21605 0.90272 0.93177 0.93903 0.90661 0.91690 0.93157 0.76231 0.84712 0.88293 0.87351 0.88983 0.87313 0.91840 0.90426 0.87473 0.97147 0.93889 0.95068 0.94852 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.47 8.41 37.16 0.31 -2.16 16 2 C 0.16 3.00 0.80 -129.99 -0.10 2.89 16 3 N -0.69 -12.13 5.14 -46.90 -0.24 -12.37 16 4 C 0.60 10.79 7.04 -12.41 -0.09 10.70 16 5 O -0.51 -10.27 12.82 5.30 0.07 -10.21 16 6 C 0.01 0.22 7.13 -82.76 -0.59 -0.37 16 7 N -0.24 -3.21 11.91 33.42 0.40 -2.81 16 8 N -0.38 -3.66 6.77 33.62 0.23 -3.43 16 9 H 0.45 2.63 7.95 -190.44 -1.51 1.11 16 10 C 0.06 0.59 6.75 -81.90 -0.55 0.04 16 11 C -0.09 -0.63 6.13 -91.74 -0.56 -1.20 16 12 C -0.16 -0.90 10.23 -26.73 -0.27 -1.18 16 13 C -0.17 -0.78 10.15 -26.69 -0.27 -1.05 16 14 C -0.09 -1.30 6.79 -39.31 -0.27 -1.56 16 15 Cl 0.00 -0.07 28.02 -51.86 -1.45 -1.52 16 16 C -0.15 -2.76 6.11 -24.33 -0.15 -2.91 16 17 C 0.15 3.74 5.88 -2.27 -0.01 3.72 16 18 N -0.60 -16.07 3.40 -169.77 -0.58 -16.65 16 19 C -0.21 -6.22 10.27 -15.06 -0.15 -6.37 16 20 H 0.08 2.18 7.83 -52.49 -0.41 1.77 16 21 C -0.01 -0.41 5.49 -17.43 -0.10 -0.51 16 22 N -0.93 -27.29 10.09 55.49 0.56 -26.73 16 23 Si 0.91 22.71 29.55 -169.99 -5.02 17.69 16 24 H -0.29 -7.24 7.11 56.52 0.40 -6.84 16 25 H -0.29 -7.22 7.11 56.52 0.40 -6.82 16 26 H -0.28 -6.84 7.11 56.52 0.40 -6.44 16 27 C 0.14 3.16 6.16 -3.06 -0.02 3.14 16 28 H 0.07 1.32 6.20 -51.93 -0.32 1.00 16 29 H 0.06 1.01 8.12 -51.93 -0.42 0.59 16 30 H 0.05 0.73 8.14 -51.93 -0.42 0.30 16 31 H 0.40 6.52 8.20 -40.82 -0.33 6.19 16 32 H 0.14 0.89 8.14 -51.92 -0.42 0.47 16 33 H 0.10 0.60 8.14 -51.93 -0.42 0.18 16 34 H 0.11 0.48 8.14 -51.93 -0.42 0.06 16 35 H 0.09 0.32 7.17 -51.93 -0.37 -0.06 16 36 H 0.11 0.36 8.14 -51.93 -0.42 -0.07 16 37 H 0.06 1.02 8.06 -51.93 -0.42 0.60 16 38 H 0.08 1.42 8.05 -51.93 -0.42 1.00 16 39 H 0.11 2.93 5.87 -51.93 -0.30 2.62 16 40 H 0.01 0.27 8.14 -51.92 -0.42 -0.15 16 41 H 0.25 7.17 8.31 -40.82 -0.34 6.83 16 42 H 0.03 0.73 7.80 -51.93 -0.41 0.32 16 43 H 0.03 0.84 6.67 -51.93 -0.35 0.49 16 LS Contribution 365.43 15.07 5.51 5.51 Total: -1.00 -33.87 365.43 -10.30 -44.17 By element: Atomic # 1 Polarization: 10.09 SS G_CDS: -6.94 Total: 3.15 kcal Atomic # 6 Polarization: 6.03 SS G_CDS: -2.83 Total: 3.20 kcal Atomic # 7 Polarization: -62.36 SS G_CDS: 0.37 Total: -61.99 kcal Atomic # 8 Polarization: -10.27 SS G_CDS: 0.07 Total: -10.21 kcal Atomic # 14 Polarization: 22.71 SS G_CDS: -5.02 Total: 17.69 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -1.45 Total: -1.52 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -33.87 -10.30 -44.17 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001046445085.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 135.738 kcal (2) G-P(sol) polarization free energy of solvation -33.865 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 101.873 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.300 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.165 kcal (6) G-S(sol) free energy of system = (1) + (5) 91.572 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds