Wall clock time and date at job start Tue Mar 31 2020 20:19:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 N 1.31923 * 119.02058 * 2 1 4 4 C 1.32132 * 121.06089 * 180.02562 * 3 2 1 5 5 C 1.38997 * 119.12244 * 359.97438 * 4 3 2 6 6 Cl 1.73599 * 120.88526 * 179.97438 * 5 4 3 7 7 C 1.39636 * 118.22319 * 0.25331 * 5 4 3 8 8 C 1.48371 * 120.55811 * 179.74969 * 7 5 4 9 9 O 1.21490 * 119.99972 * 0.02562 * 8 7 5 10 10 N 1.34777 * 119.99755 * 179.97438 * 8 7 5 11 11 C 1.46499 * 119.99896 * 180.02562 * 10 8 7 12 12 H 1.08998 * 109.47242 * 35.00274 * 11 10 8 13 13 C 1.52998 * 109.47061 * 275.00127 * 11 10 8 14 14 C 1.53008 * 109.47020 * 299.99830 * 13 11 10 15 15 C 1.52997 * 109.46969 * 300.00151 * 14 13 11 16 16 C 1.52998 * 109.47373 * 60.00065 * 15 14 13 17 17 H 1.09001 * 109.47231 * 59.99574 * 16 15 14 18 18 N 1.46499 * 109.47499 * 179.97438 * 16 15 14 19 19 C 1.36938 * 120.00092 * 274.99965 * 18 16 15 20 20 H 1.07995 * 119.99768 * 0.02562 * 19 18 16 21 21 C 1.38811 * 119.99978 * 179.97438 * 19 18 16 22 22 N 1.31620 * 119.99873 * 0.02562 * 21 19 18 23 23 Si 1.86803 * 119.99863 * 180.02562 * 21 19 18 24 24 H 1.48491 * 109.46991 * 0.02562 * 23 21 19 25 25 H 1.48508 * 109.46827 * 120.00332 * 23 21 19 26 26 H 1.48499 * 109.46926 * 240.00040 * 23 21 19 27 27 C 1.53000 * 109.47222 * 299.99882 * 16 15 14 28 28 N 1.31523 * 119.01346 * 180.02562 * 2 1 3 29 29 H 1.09002 * 109.46873 * 90.00151 * 1 2 3 30 30 H 1.08994 * 109.46843 * 209.99599 * 1 2 3 31 31 H 1.08997 * 109.46959 * 329.99923 * 1 2 3 32 32 H 1.07997 * 120.44201 * 180.02562 * 4 3 2 33 33 H 0.96998 * 119.99903 * 0.02562 * 10 8 7 34 34 H 1.08998 * 109.47605 * 59.99905 * 13 11 10 35 35 H 1.09001 * 109.47231 * 180.02562 * 13 11 10 36 36 H 1.09002 * 109.47124 * 180.02562 * 14 13 11 37 37 H 1.09001 * 109.46849 * 60.00096 * 14 13 11 38 38 H 1.09001 * 109.47290 * 299.99675 * 15 14 13 39 39 H 1.09008 * 109.47145 * 180.02562 * 15 14 13 40 40 H 0.96998 * 120.00107 * 94.99597 * 18 16 15 41 41 H 0.97005 * 119.99730 * 179.97438 * 22 21 19 42 42 H 1.09001 * 109.46766 * 299.99976 * 27 16 15 43 43 H 1.09002 * 109.47327 * 179.97438 * 27 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 7 2.1471 1.1536 0.0000 4 6 3.4675 1.2006 -0.0005 5 6 4.1868 0.0112 -0.0005 6 17 5.9228 0.0196 -0.0018 7 6 3.4757 -1.1905 -0.0054 8 6 4.1911 -2.4903 -0.0112 9 8 5.4058 -2.5151 -0.0113 10 7 3.4935 -3.6434 -0.0154 11 6 4.1998 -4.9269 -0.0206 12 1 5.1127 -4.8416 0.5689 13 6 4.5554 -5.3075 -1.4592 14 6 3.2739 -5.4273 -2.2866 15 6 2.3748 -6.5068 -1.6807 16 6 2.0192 -6.1261 -0.2421 17 1 1.4937 -5.1712 -0.2383 18 7 1.1577 -7.1595 0.3378 19 6 -0.1954 -7.1179 0.1315 20 1 -0.6274 -6.3236 -0.4590 21 6 -1.0115 -8.0973 0.6806 22 7 -0.4849 -9.0656 1.3999 23 14 -2.8573 -8.0410 0.3986 24 1 -3.1944 -6.8614 -0.4381 25 1 -3.2899 -9.2801 -0.2962 26 1 -3.5547 -7.9371 1.7055 27 6 3.3006 -6.0064 0.5853 28 7 2.1450 -1.1502 -0.0005 29 1 -0.3633 0.0000 -1.0277 30 1 -0.3633 -0.8900 0.5138 31 1 -0.3633 0.8900 0.5138 32 1 3.9812 2.1506 -0.0001 33 1 2.5237 -3.6236 -0.0150 34 1 5.1960 -4.5385 -1.8908 35 1 5.0806 -6.2627 -1.4631 36 1 3.5272 -5.6989 -3.3114 37 1 2.7484 -4.4724 -2.2827 38 1 2.9003 -7.4617 -1.6846 39 1 1.4620 -6.5925 -2.2705 40 1 1.5458 -7.8731 0.8679 41 1 -1.0553 -9.7498 1.7839 42 1 3.8261 -6.9613 0.5814 43 1 3.0473 -5.7347 1.6101 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000981370323.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:19:59 Heat of formation + Delta-G solvation = 14.840725 kcal Electronic energy + Delta-G solvation = -27193.197981 eV Core-core repulsion = 23299.526470 eV Total energy + Delta-G solvation = -3893.671511 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 338.125 amu Computer time = 2.86 seconds Orbital eigenvalues (eV) -41.69260 -39.98065 -38.01526 -36.97180 -34.63294 -34.35471 -33.36236 -32.95203 -31.16305 -29.70648 -28.72587 -27.90258 -26.08201 -23.83524 -23.53803 -22.12746 -21.46234 -20.96611 -19.06313 -18.58931 -18.06638 -17.11791 -16.49284 -16.10290 -15.72732 -15.45455 -15.24760 -14.76457 -14.41662 -14.06284 -13.85606 -13.78061 -13.47259 -13.23997 -13.06309 -12.70821 -12.48520 -12.13282 -12.10749 -11.99833 -11.79391 -11.72073 -11.58835 -11.30298 -11.01520 -10.90799 -10.78854 -10.47201 -10.38530 -10.19342 -10.16436 -9.75908 -9.54656 -9.53820 -9.47342 -8.99438 -8.87066 -6.98025 -5.78690 -3.07480 -0.01423 0.33299 1.62238 2.51651 2.79290 3.33472 3.40225 3.41396 3.47048 3.49342 3.53079 4.05966 4.24578 4.55347 4.59247 4.92359 5.03725 5.06232 5.15356 5.25882 5.36390 5.45111 5.47452 5.56023 5.66955 5.73631 5.84049 5.86721 5.95017 6.03912 6.07665 6.20455 6.22123 6.28072 6.48510 6.53990 6.57879 6.69931 6.93313 7.07222 7.37001 7.54665 7.68670 8.04323 8.39711 9.51129 10.08407 10.42968 11.43988 Molecular weight = 338.13amu Principal moments of inertia in cm(-1) A = 0.012774 B = 0.003305 C = 0.002778 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2191.419012 B = 8469.087781 C =10078.066505 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.089 4.089 2 C 0.322 3.678 3 N -0.493 5.493 4 C 0.166 3.834 5 C -0.112 4.112 6 Cl -0.001 7.001 7 C 0.150 3.850 8 C 0.562 3.438 9 O -0.510 6.510 10 N -0.690 5.690 11 C 0.150 3.850 12 H 0.088 0.912 13 C -0.127 4.127 14 C -0.116 4.116 15 C -0.136 4.136 16 C 0.180 3.820 17 H 0.043 0.957 18 N -0.724 5.724 19 C -0.237 4.237 20 H 0.071 0.929 21 C -0.013 4.013 22 N -0.932 5.932 23 Si 0.904 3.096 24 H -0.280 1.280 25 H -0.292 1.292 26 H -0.292 1.292 27 C -0.134 4.134 28 N -0.477 5.477 29 H 0.093 0.907 30 H 0.095 0.905 31 H 0.090 0.910 32 H 0.184 0.816 33 H 0.414 0.586 34 H 0.061 0.939 35 H 0.073 0.927 36 H 0.053 0.947 37 H 0.055 0.945 38 H 0.056 0.944 39 H 0.061 0.939 40 H 0.384 0.616 41 H 0.254 0.746 42 H 0.079 0.921 43 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.851 19.862 -4.006 22.530 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.055 3.945 3 N -0.208 5.208 4 C -0.003 4.003 5 C -0.145 4.145 6 Cl 0.028 6.972 7 C 0.000 4.000 8 C 0.344 3.656 9 O -0.385 6.385 10 N -0.342 5.342 11 C 0.046 3.954 12 H 0.106 0.894 13 C -0.166 4.166 14 C -0.155 4.155 15 C -0.177 4.177 16 C 0.069 3.931 17 H 0.061 0.939 18 N -0.365 5.365 19 C -0.368 4.368 20 H 0.089 0.911 21 C -0.209 4.209 22 N -0.581 5.581 23 Si 0.736 3.264 24 H -0.205 1.205 25 H -0.219 1.219 26 H -0.219 1.219 27 C -0.172 4.172 28 N -0.195 5.195 29 H 0.111 0.889 30 H 0.114 0.886 31 H 0.109 0.891 32 H 0.201 0.799 33 H 0.252 0.748 34 H 0.080 0.920 35 H 0.091 0.909 36 H 0.072 0.928 37 H 0.073 0.927 38 H 0.075 0.925 39 H 0.080 0.920 40 H 0.217 0.783 41 H 0.064 0.936 42 H 0.097 0.903 43 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges 9.691 19.789 -4.026 22.399 hybrid contribution -0.339 -0.231 -0.029 0.411 sum 9.352 19.558 -4.055 22.055 Atomic orbital electron populations 1.20696 0.84363 1.05070 1.04638 1.23450 0.98768 0.82643 0.89615 1.68335 1.08925 1.30373 1.13181 1.23426 0.89252 0.97397 0.90191 1.22880 0.89866 0.95993 1.05734 1.98439 1.04180 1.98612 1.95963 1.21751 0.89620 0.94371 0.94209 1.17640 0.86730 0.82814 0.78444 1.90865 1.12010 1.86513 1.49069 1.46094 1.11611 1.04838 1.71691 1.21087 0.95742 0.81565 0.97033 0.89406 1.21905 0.98064 1.01641 0.94954 1.21518 0.95899 0.99710 0.98338 1.22283 0.98748 0.97546 0.99092 1.20156 0.89418 0.92913 0.90564 0.93889 1.42419 1.03543 1.29032 1.61458 1.19269 0.83163 1.07882 1.26512 0.91137 1.24734 0.97937 0.97692 1.00571 1.69670 1.34105 1.15347 1.38954 0.86154 0.85777 0.77212 0.77280 1.20538 1.21931 1.21906 1.22140 0.97138 0.97870 1.00099 1.68395 1.07377 1.31017 1.12677 0.88895 0.88613 0.89114 0.79877 0.74761 0.92003 0.90858 0.92784 0.92651 0.92516 0.92036 0.78261 0.93583 0.90271 0.91112 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.70 10.31 36.01 0.37 -0.33 16 2 C 0.32 3.48 7.64 -157.31 -1.20 2.28 16 3 N -0.49 -5.07 10.31 -10.70 -0.11 -5.18 16 4 C 0.17 1.51 11.14 -17.14 -0.19 1.32 16 5 C -0.11 -1.24 6.40 -38.78 -0.25 -1.49 16 6 Cl 0.00 -0.01 26.25 -51.86 -1.36 -1.37 16 7 C 0.15 1.92 6.79 -82.61 -0.56 1.36 16 8 C 0.56 7.88 7.79 -12.09 -0.09 7.79 16 9 O -0.51 -7.89 13.81 5.37 0.07 -7.82 16 10 N -0.69 -9.43 4.23 -54.58 -0.23 -9.66 16 11 C 0.15 2.05 2.78 -67.93 -0.19 1.86 16 12 H 0.09 1.20 7.58 -51.93 -0.39 0.81 16 13 C -0.13 -1.66 5.60 -26.73 -0.15 -1.81 16 14 C -0.12 -1.62 5.77 -26.73 -0.15 -1.78 16 15 C -0.14 -2.32 5.50 -26.73 -0.15 -2.47 16 16 C 0.18 3.31 2.60 -67.93 -0.18 3.14 16 17 H 0.04 0.81 6.44 -51.93 -0.33 0.47 16 18 N -0.72 -17.31 5.12 -53.43 -0.27 -17.58 16 19 C -0.24 -6.34 9.93 -15.06 -0.15 -6.49 16 20 H 0.07 1.84 7.83 -52.49 -0.41 1.43 16 21 C -0.01 -0.37 5.50 -17.43 -0.10 -0.47 16 22 N -0.93 -27.61 13.06 55.49 0.72 -26.88 16 23 Si 0.90 21.92 29.55 -169.99 -5.02 16.89 16 24 H -0.28 -6.54 7.11 56.52 0.40 -6.14 16 25 H -0.29 -7.16 7.11 56.52 0.40 -6.76 16 26 H -0.29 -7.13 7.11 56.52 0.40 -6.73 16 27 C -0.13 -2.07 5.08 -26.73 -0.14 -2.21 16 28 N -0.48 -5.93 9.59 -7.31 -0.07 -6.00 16 29 H 0.09 0.63 8.14 -51.93 -0.42 0.21 16 30 H 0.10 0.77 8.14 -51.93 -0.42 0.34 16 31 H 0.09 0.58 8.14 -51.93 -0.42 0.16 16 32 H 0.18 1.01 8.06 -52.49 -0.42 0.59 16 33 H 0.41 5.80 6.25 -40.82 -0.26 5.54 16 34 H 0.06 0.82 8.14 -51.93 -0.42 0.40 16 35 H 0.07 0.90 8.14 -51.93 -0.42 0.48 16 36 H 0.05 0.70 8.14 -51.93 -0.42 0.28 16 37 H 0.05 0.78 7.60 -51.93 -0.39 0.39 16 38 H 0.06 0.99 8.14 -51.93 -0.42 0.57 16 39 H 0.06 1.16 8.14 -51.92 -0.42 0.73 16 40 H 0.38 9.83 7.80 -40.82 -0.32 9.51 16 41 H 0.25 7.31 8.31 -40.82 -0.34 6.97 16 42 H 0.08 1.20 8.14 -51.93 -0.42 0.78 16 43 H 0.07 1.15 8.14 -51.93 -0.42 0.72 16 LS Contribution 367.36 15.07 5.54 5.54 Total: -1.00 -30.89 367.36 -9.75 -40.64 By element: Atomic # 1 Polarization: 16.63 SS G_CDS: -5.89 Total: 10.74 kcal Atomic # 6 Polarization: 3.81 SS G_CDS: -3.12 Total: 0.69 kcal Atomic # 7 Polarization: -65.35 SS G_CDS: 0.04 Total: -65.31 kcal Atomic # 8 Polarization: -7.89 SS G_CDS: 0.07 Total: -7.82 kcal Atomic # 14 Polarization: 21.92 SS G_CDS: -5.02 Total: 16.89 kcal Atomic # 17 Polarization: -0.01 SS G_CDS: -1.36 Total: -1.37 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -30.89 -9.75 -40.64 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000981370323.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.477 kcal (2) G-P(sol) polarization free energy of solvation -30.886 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.591 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.750 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.636 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.841 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.86 seconds