Wall clock time and date at job start Tue Mar 31 2020 20:21:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 N 1.31923 * 119.01662 * 2 1 4 4 C 1.32137 * 121.05709 * 180.02562 * 3 2 1 5 5 C 1.38980 * 119.12488 * 359.97438 * 4 3 2 6 6 Cl 1.73602 * 120.88872 * 180.02562 * 5 4 3 7 7 C 1.39642 * 118.22916 * 0.02562 * 5 4 3 8 8 C 1.48362 * 120.56614 * 179.97438 * 7 5 4 9 9 O 1.21492 * 120.00021 * 0.02562 * 8 7 5 10 10 N 1.34781 * 119.99882 * 179.97438 * 8 7 5 11 11 C 1.46502 * 119.99505 * 180.02562 * 10 8 7 12 12 H 1.08996 * 109.50002 * 35.01052 * 11 10 8 13 13 C 1.53036 * 109.49890 * 274.93766 * 11 10 8 14 14 C 1.53104 * 109.50528 * 301.38086 * 13 11 10 15 15 C 1.53188 * 109.33264 * 298.66025 * 14 13 11 16 16 N 1.46918 * 108.77527 * 54.63386 * 15 14 13 17 17 C 1.36947 * 120.63215 * 126.41573 * 16 15 14 18 18 H 1.07997 * 120.00230 * 208.99157 * 17 16 15 19 19 C 1.38812 * 119.99667 * 28.98434 * 17 16 15 20 20 N 1.31617 * 120.00179 * 15.03886 * 19 17 16 21 21 Si 1.86803 * 119.99693 * 195.03896 * 19 17 16 22 22 H 1.48500 * 109.47146 * 60.00254 * 21 19 17 23 23 H 1.48499 * 109.46993 * 180.02562 * 21 19 17 24 24 H 1.48496 * 109.47202 * 300.00060 * 21 19 17 25 25 C 1.46926 * 118.74207 * 306.38699 * 16 15 14 26 26 H 1.09000 * 109.70556 * 293.75504 * 25 16 15 27 27 C 1.52999 * 109.59046 * 173.39644 * 25 16 15 28 28 N 1.31519 * 119.01904 * 180.30439 * 2 1 3 29 29 H 1.08996 * 109.47273 * 89.99822 * 1 2 3 30 30 H 1.09003 * 109.46777 * 210.00004 * 1 2 3 31 31 H 1.08998 * 109.46955 * 329.99597 * 1 2 3 32 32 H 1.08004 * 120.43553 * 180.02562 * 4 3 2 33 33 H 0.96997 * 120.00267 * 359.73374 * 10 8 7 34 34 H 1.08998 * 109.46036 * 61.43955 * 13 11 10 35 35 H 1.09004 * 109.45923 * 181.39748 * 13 11 10 36 36 H 1.09000 * 109.48652 * 178.69639 * 14 13 11 37 37 H 1.09005 * 109.51125 * 58.63201 * 14 13 11 38 38 H 1.08999 * 109.58603 * 294.84002 * 15 14 13 39 39 H 1.09002 * 109.58737 * 174.42311 * 15 14 13 40 40 H 0.97001 * 119.99929 * 179.97438 * 20 19 17 41 41 H 1.09006 * 109.46834 * 300.71493 * 27 25 16 42 42 H 1.09001 * 109.47066 * 60.71240 * 27 25 16 43 43 H 1.08992 * 109.47163 * 180.71299 * 27 25 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 7 2.1470 1.1536 0.0000 4 6 3.4675 1.2007 -0.0005 5 6 4.1867 0.0115 -0.0005 6 17 5.9227 0.0198 -0.0005 7 6 3.4758 -1.1904 -0.0005 8 6 4.1912 -2.4902 -0.0011 9 8 5.4058 -2.5150 -0.0011 10 7 3.4935 -3.6434 -0.0006 11 6 4.2000 -4.9268 -0.0005 12 1 5.1129 -4.8396 0.5885 13 6 4.5546 -5.3147 -1.4378 14 6 3.2748 -5.4053 -2.2734 15 6 2.3639 -6.4899 -1.6898 16 7 2.1364 -6.2014 -0.2674 17 6 0.8643 -6.1166 0.2326 18 1 0.6592 -5.4824 1.0824 19 6 -0.1616 -6.8458 -0.3529 20 7 0.1197 -7.8299 -1.1804 21 14 -1.9413 -6.4302 0.0336 22 1 -2.2214 -5.0289 -0.3703 23 1 -2.8375 -7.3495 -0.7127 24 1 -2.1798 -6.5823 1.4913 25 6 3.2995 -6.0061 0.6088 26 1 3.8554 -6.9397 0.6953 27 6 2.8288 -5.5591 1.9943 28 7 2.1451 -1.1501 -0.0061 29 1 -0.3633 0.0000 -1.0276 30 1 -0.3633 -0.8900 0.5139 31 1 -0.3633 0.8899 0.5139 32 1 3.9811 2.1508 -0.0001 33 1 2.5238 -3.6236 0.0041 34 1 5.2155 -4.5605 -1.8650 35 1 5.0582 -6.2814 -1.4393 36 1 3.5296 -5.6590 -3.3024 37 1 2.7577 -4.4460 -2.2525 38 1 2.8427 -7.4637 -1.7932 39 1 1.4112 -6.4909 -2.2195 40 1 -0.5972 -8.3396 -1.5892 41 1 2.2690 -4.6281 1.9050 42 1 2.1884 -6.3282 2.4260 43 1 3.6937 -5.4026 2.6388 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000993938619.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 20:21:02 Heat of formation + Delta-G solvation = 36.055260 kcal Electronic energy + Delta-G solvation = -28211.511394 eV Core-core repulsion = 24318.759814 eV Total energy + Delta-G solvation = -3892.751580 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 338.125 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -41.49894 -39.62267 -37.66728 -36.79723 -34.33658 -33.89469 -33.18565 -32.37399 -31.65583 -29.44874 -28.56731 -26.57218 -25.67144 -24.99960 -23.43725 -22.05629 -20.98114 -20.59679 -18.83445 -18.46907 -17.77959 -16.43916 -16.31328 -15.88260 -15.47474 -15.23495 -14.89247 -14.68909 -13.98331 -13.85213 -13.67875 -13.54936 -13.17709 -13.00838 -12.98381 -12.58115 -12.56717 -11.97675 -11.89233 -11.57498 -11.51268 -11.32392 -11.24812 -11.09901 -10.96972 -10.71480 -10.62738 -10.53814 -10.21591 -10.11908 -10.02538 -9.67495 -9.37824 -9.33360 -9.23697 -8.59675 -8.46685 -6.69241 -5.81255 -3.26419 0.17768 0.50789 1.78836 2.76176 3.09550 3.35350 3.41717 3.42081 3.55521 3.59345 3.70530 4.29633 4.44413 4.45834 4.78456 5.16042 5.28211 5.32247 5.39488 5.50102 5.53317 5.57423 5.62076 5.71302 5.93373 6.01675 6.09657 6.19767 6.27403 6.38461 6.41026 6.49813 6.63370 6.65682 6.75571 6.91028 6.92998 7.03457 7.37715 7.60745 7.66269 7.77851 7.90636 8.39948 8.42574 9.17653 9.80408 10.36954 11.26673 Molecular weight = 338.13amu Principal moments of inertia in cm(-1) A = 0.012261 B = 0.004454 C = 0.003579 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2283.100361 B = 6285.600014 C = 7821.642267 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 C 0.320 3.680 3 N -0.496 5.496 4 C 0.163 3.837 5 C -0.113 4.113 6 Cl -0.003 7.003 7 C 0.154 3.846 8 C 0.555 3.445 9 O -0.519 6.519 10 N -0.671 5.671 11 C 0.131 3.869 12 H 0.080 0.920 13 C -0.121 4.121 14 C -0.141 4.141 15 C 0.171 3.829 16 N -0.585 5.585 17 C -0.254 4.254 18 H 0.070 0.930 19 C 0.006 3.994 20 N -0.901 5.901 21 Si 0.900 3.100 22 H -0.283 1.283 23 H -0.292 1.292 24 H -0.283 1.283 25 C 0.160 3.840 26 H 0.042 0.958 27 C -0.137 4.137 28 N -0.473 5.473 29 H 0.092 0.908 30 H 0.095 0.905 31 H 0.089 0.911 32 H 0.183 0.817 33 H 0.420 0.580 34 H 0.051 0.949 35 H 0.065 0.935 36 H 0.047 0.953 37 H 0.052 0.948 38 H 0.018 0.982 39 H 0.088 0.912 40 H 0.254 0.746 41 H 0.054 0.946 42 H 0.064 0.936 43 H 0.039 0.961 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.925 15.379 1.720 16.571 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C 0.053 3.947 3 N -0.211 5.211 4 C -0.005 4.005 5 C -0.146 4.146 6 Cl 0.026 6.974 7 C 0.004 3.996 8 C 0.336 3.664 9 O -0.395 6.395 10 N -0.322 5.322 11 C 0.025 3.975 12 H 0.098 0.902 13 C -0.159 4.159 14 C -0.181 4.181 15 C 0.046 3.954 16 N -0.309 5.309 17 C -0.383 4.383 18 H 0.088 0.912 19 C -0.193 4.193 20 N -0.545 5.545 21 Si 0.730 3.270 22 H -0.209 1.209 23 H -0.218 1.218 24 H -0.210 1.210 25 C 0.052 3.948 26 H 0.060 0.940 27 C -0.195 4.195 28 N -0.190 5.190 29 H 0.110 0.890 30 H 0.113 0.887 31 H 0.107 0.893 32 H 0.200 0.800 33 H 0.259 0.741 34 H 0.070 0.930 35 H 0.083 0.917 36 H 0.066 0.934 37 H 0.071 0.929 38 H 0.036 0.964 39 H 0.106 0.894 40 H 0.064 0.936 41 H 0.073 0.927 42 H 0.083 0.917 43 H 0.058 0.942 Dipole moment (debyes) X Y Z Total from point charges 5.807 15.130 1.635 16.289 hybrid contribution -0.307 0.204 0.031 0.370 sum 5.500 15.334 1.667 16.375 Atomic orbital electron populations 1.20674 0.84535 1.04865 1.04590 1.23432 0.98723 0.82709 0.89792 1.68319 1.08905 1.30425 1.13469 1.23377 0.89280 0.97320 0.90554 1.22867 0.89738 0.96017 1.05967 1.98430 1.04364 1.98618 1.96013 1.21872 0.89549 0.94571 0.93585 1.17663 0.86758 0.82870 0.79064 1.90840 1.12037 1.86523 1.50108 1.45922 1.12018 1.04363 1.69915 1.21697 0.95725 0.82923 0.97123 0.90245 1.21783 0.98040 1.00698 0.95386 1.22169 0.96610 1.01657 0.97636 1.20815 0.98160 0.92151 0.84302 1.44153 1.00539 1.83054 1.03119 1.19108 0.83822 1.20511 1.14876 0.91225 1.25072 0.98406 0.95605 1.00177 1.70005 1.31196 1.19855 1.33449 0.86414 0.85037 0.77722 0.77833 1.20931 1.21784 1.20961 1.20717 0.89722 0.93815 0.90523 0.94040 1.21799 0.99980 1.01855 0.95826 1.68445 1.07441 1.30796 1.12344 0.88985 0.88672 0.89274 0.80049 0.74140 0.93040 0.91656 0.93422 0.92887 0.96379 0.89356 0.93625 0.92727 0.91669 0.94199 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.86 10.31 36.01 0.37 -0.49 16 2 C 0.32 4.08 7.64 -157.32 -1.20 2.88 16 3 N -0.50 -5.91 10.31 -10.70 -0.11 -6.02 16 4 C 0.16 1.75 11.14 -17.15 -0.19 1.56 16 5 C -0.11 -1.47 6.40 -38.78 -0.25 -1.72 16 6 Cl 0.00 -0.04 26.25 -51.86 -1.36 -1.40 16 7 C 0.15 2.33 6.79 -82.61 -0.56 1.77 16 8 C 0.55 9.36 7.79 -12.09 -0.09 9.26 16 9 O -0.52 -9.38 13.81 5.37 0.07 -9.30 16 10 N -0.67 -11.60 3.47 -54.47 -0.19 -11.79 16 11 C 0.13 2.30 2.32 -67.81 -0.16 2.15 16 12 H 0.08 1.37 7.58 -51.93 -0.39 0.97 16 13 C -0.12 -2.10 5.58 -26.66 -0.15 -2.25 16 14 C -0.14 -2.68 5.93 -26.58 -0.16 -2.84 16 15 C 0.17 3.87 5.29 -3.72 -0.02 3.85 16 16 N -0.58 -13.29 2.65 -164.78 -0.44 -13.72 16 17 C -0.25 -6.31 8.61 -15.05 -0.13 -6.44 16 18 H 0.07 1.69 6.20 -52.49 -0.33 1.36 16 19 C 0.01 0.17 4.96 -17.43 -0.09 0.08 16 20 N -0.90 -24.89 11.14 55.49 0.62 -24.27 16 21 Si 0.90 20.63 29.58 -169.99 -5.03 15.60 16 22 H -0.28 -6.37 7.11 56.52 0.40 -5.97 16 23 H -0.29 -6.86 7.11 56.52 0.40 -6.45 16 24 H -0.28 -6.46 7.11 56.52 0.40 -6.06 16 25 C 0.16 3.10 3.20 -67.60 -0.22 2.88 16 26 H 0.04 0.83 8.14 -51.93 -0.42 0.41 16 27 C -0.14 -2.46 7.72 37.16 0.29 -2.18 16 28 N -0.47 -7.02 9.59 -7.31 -0.07 -7.09 16 29 H 0.09 0.81 8.14 -51.93 -0.42 0.38 16 30 H 0.09 0.95 8.14 -51.93 -0.42 0.53 16 31 H 0.09 0.70 8.14 -51.93 -0.42 0.28 16 32 H 0.18 1.27 8.06 -52.48 -0.42 0.85 16 33 H 0.42 7.75 7.14 -40.82 -0.29 7.45 16 34 H 0.05 0.89 8.14 -51.93 -0.42 0.47 16 35 H 0.06 1.10 8.14 -51.93 -0.42 0.67 16 36 H 0.05 0.84 8.14 -51.93 -0.42 0.41 16 37 H 0.05 1.04 7.53 -51.93 -0.39 0.65 16 38 H 0.02 0.43 8.14 -51.93 -0.42 0.01 16 39 H 0.09 2.25 6.06 -51.93 -0.31 1.94 16 40 H 0.25 6.88 8.31 -40.82 -0.34 6.54 16 41 H 0.05 0.99 6.37 -51.93 -0.33 0.66 16 42 H 0.06 1.25 7.66 -51.93 -0.40 0.86 16 43 H 0.04 0.62 8.14 -51.93 -0.42 0.20 16 LS Contribution 359.98 15.07 5.42 5.42 Total: -1.00 -28.44 359.98 -9.44 -37.88 By element: Atomic # 1 Polarization: 11.98 SS G_CDS: -5.81 Total: 6.17 kcal Atomic # 6 Polarization: 11.08 SS G_CDS: -2.55 Total: 8.53 kcal Atomic # 7 Polarization: -62.70 SS G_CDS: -0.19 Total: -62.89 kcal Atomic # 8 Polarization: -9.38 SS G_CDS: 0.07 Total: -9.30 kcal Atomic # 14 Polarization: 20.63 SS G_CDS: -5.03 Total: 15.60 kcal Atomic # 17 Polarization: -0.04 SS G_CDS: -1.36 Total: -1.40 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -28.44 -9.44 -37.88 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000993938619.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 73.931 kcal (2) G-P(sol) polarization free energy of solvation -28.436 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 45.495 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.439 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.875 kcal (6) G-S(sol) free energy of system = (1) + (5) 36.055 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds