Wall clock time and date at job start Tue Mar 31 2020 22:04:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 N 1.46501 * 109.47058 * 2 1 4 4 N 1.28434 * 125.19143 * 273.80093 * 3 2 1 5 5 C 1.30828 * 110.98193 * 179.81947 * 4 3 2 6 6 C 1.39813 * 107.87874 * 0.43851 * 5 4 3 7 7 Cl 1.73598 * 127.34031 * 179.74639 * 6 5 4 8 8 C 1.36750 * 125.18206 * 94.10391 * 3 2 1 9 9 C 1.47027 * 126.90914 * 359.97438 * 8 3 2 10 10 O 1.21643 * 120.00558 * 92.77257 * 9 8 3 11 11 N 1.34780 * 119.99517 * 272.77657 * 9 8 3 12 12 C 1.47165 * 120.70869 * 175.37808 * 11 9 8 13 13 C 1.53890 * 108.02657 * 132.75098 * 12 11 9 14 14 H 1.08996 * 112.09306 * 181.91532 * 13 12 11 15 15 C 1.54544 * 107.82987 * 306.50749 * 13 12 11 16 16 C 1.54283 * 104.85024 * 89.07945 * 15 13 12 17 17 C 1.54545 * 104.84565 * 359.97438 * 16 15 13 18 18 H 1.08997 * 112.18561 * 146.41875 * 17 16 15 19 19 C 1.47167 * 120.71245 * 355.09422 * 11 9 8 20 20 N 1.48306 * 107.20885 * 58.36968 * 13 12 11 21 21 C 1.36936 * 128.07772 * 106.66183 * 20 13 12 22 22 H 1.07995 * 119.99863 * 12.98315 * 21 20 13 23 23 C 1.38820 * 119.99683 * 192.97754 * 21 20 13 24 24 N 1.31617 * 120.00194 * 9.86160 * 23 21 20 25 25 Si 1.86796 * 119.99563 * 189.85531 * 23 21 20 26 26 H 1.48492 * 109.47361 * 60.00457 * 25 23 21 27 27 H 1.48500 * 109.46910 * 180.02562 * 25 23 21 28 28 H 1.48504 * 109.47315 * 299.99748 * 25 23 21 29 29 H 1.09000 * 109.46970 * 54.35890 * 1 2 3 30 30 H 1.08999 * 109.46995 * 294.36096 * 1 2 3 31 31 H 1.09005 * 109.46932 * 174.35503 * 1 2 3 32 32 H 1.08999 * 109.47327 * 120.00008 * 2 1 3 33 33 H 1.08999 * 109.47029 * 240.00278 * 2 1 3 34 34 H 1.08002 * 126.06679 * 180.14387 * 5 4 3 35 35 H 1.09001 * 109.74869 * 252.38800 * 12 11 9 36 36 H 1.09000 * 109.74890 * 13.06566 * 12 11 9 37 37 H 1.08999 * 110.35900 * 207.91878 * 15 13 12 38 38 H 1.08993 * 110.36498 * 330.23772 * 15 13 12 39 39 H 1.08990 * 110.36590 * 241.14768 * 16 15 13 40 40 H 1.08998 * 110.36133 * 118.82833 * 16 15 13 41 41 H 1.09004 * 109.74528 * 346.88390 * 19 11 9 42 42 H 1.09004 * 109.74415 * 107.60766 * 19 11 9 43 43 H 0.96993 * 119.99841 * 180.02562 * 24 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 7 2.1995 2.1023 -1.0473 5 6 2.6386 3.2922 -0.7266 6 6 2.7627 3.3433 0.6651 7 17 3.3092 4.6825 1.6250 8 6 2.3564 2.0974 1.1148 9 6 2.2996 1.6380 2.5103 10 8 3.2827 1.1430 3.0283 11 7 1.1581 1.7651 3.2156 12 6 1.0522 1.2201 4.5785 13 6 0.4333 2.3043 5.4783 14 1 0.3550 1.9803 6.5160 15 6 1.2756 3.5901 5.3174 16 6 0.6285 4.3413 4.1353 17 6 -0.5455 3.4408 3.6889 18 1 -1.3927 4.0206 3.3226 19 6 -0.0068 2.4575 2.6418 20 7 -0.8865 2.6543 4.8994 21 6 -2.1294 2.3267 5.3715 22 1 -2.2405 1.9301 6.3698 23 6 -3.2466 2.5047 4.5669 24 7 -3.0996 2.8011 3.2930 25 14 -4.9583 2.3231 5.2922 26 1 -5.1410 3.3132 6.3837 27 1 -5.9722 2.5602 4.2334 28 1 -5.1227 0.9510 5.8359 29 1 -0.3633 0.5988 -0.8352 30 1 -0.3633 0.4239 0.9362 31 1 -0.3633 -1.0227 -0.1011 32 1 1.8934 -0.5138 0.8900 33 1 1.8933 -0.5138 -0.8900 34 1 2.8695 4.0916 -1.4151 35 1 0.4133 0.3369 4.5733 36 1 2.0431 0.9555 4.9475 37 1 1.2239 4.1932 6.2239 38 1 2.3107 3.3390 5.0863 39 1 1.3456 4.4597 3.3230 40 1 0.2586 5.3136 4.4606 41 1 0.2927 3.0019 1.7462 42 1 -0.7800 1.7312 2.3908 43 1 -3.8802 2.9258 2.7309 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001029322368.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 22:04:34 Heat of formation + Delta-G solvation = 81.480430 kcal Electronic energy + Delta-G solvation = -29326.636458 eV Core-core repulsion = 25435.854661 eV Total energy + Delta-G solvation = -3890.781797 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 338.125 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -42.59744 -39.97123 -37.82046 -36.49627 -34.57644 -33.85171 -32.53492 -31.14858 -30.26251 -29.78167 -29.29988 -26.43052 -24.48216 -23.91771 -23.76192 -22.37603 -21.51318 -19.76678 -19.61521 -18.77387 -17.84271 -16.69198 -16.22103 -15.72293 -15.59810 -15.31870 -14.84342 -14.68945 -14.19737 -13.91277 -13.80453 -13.45405 -13.10434 -13.03802 -12.89837 -12.78510 -12.17409 -11.92548 -11.88033 -11.73803 -11.70248 -11.50854 -11.38230 -11.08701 -10.93158 -10.84513 -10.48961 -10.36892 -10.14771 -9.86274 -9.81018 -9.65037 -9.59088 -9.20595 -8.89873 -8.64237 -8.24260 -6.95587 -5.91377 -3.25712 1.57780 1.85885 2.48096 2.51336 2.93409 3.31296 3.36565 3.37430 3.39632 4.35500 4.41725 4.55790 4.82458 4.92895 5.04909 5.12678 5.24840 5.28011 5.39306 5.52215 5.63287 5.66852 5.71614 5.76142 5.88948 5.92432 5.98926 6.09034 6.19892 6.24114 6.32857 6.51682 6.54209 6.58610 6.63899 6.69986 6.82243 6.87494 7.16917 7.39321 7.57589 7.80287 7.94508 8.05879 8.34190 8.98398 9.60721 10.36264 11.21247 Molecular weight = 338.13amu Principal moments of inertia in cm(-1) A = 0.013425 B = 0.004936 C = 0.004402 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2085.121844 B = 5671.064894 C = 6358.990894 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C 0.118 3.882 3 N -0.262 5.262 4 N -0.276 5.276 5 C 0.022 3.978 6 C -0.124 4.124 7 Cl -0.021 7.021 8 C 0.013 3.987 9 C 0.579 3.421 10 O -0.541 6.541 11 N -0.571 5.571 12 C 0.100 3.900 13 C 0.135 3.865 14 H 0.081 0.919 15 C -0.124 4.124 16 C -0.142 4.142 17 C 0.169 3.831 18 H 0.124 0.876 19 C 0.106 3.894 20 N -0.583 5.583 21 C -0.224 4.224 22 H 0.077 0.923 23 C -0.003 4.003 24 N -0.916 5.916 25 Si 0.912 3.088 26 H -0.285 1.285 27 H -0.290 1.290 28 H -0.285 1.285 29 H 0.070 0.930 30 H 0.076 0.924 31 H 0.082 0.918 32 H 0.098 0.902 33 H 0.104 0.896 34 H 0.192 0.808 35 H 0.068 0.932 36 H 0.078 0.922 37 H 0.055 0.945 38 H 0.055 0.945 39 H 0.059 0.941 40 H 0.053 0.947 41 H 0.058 0.942 42 H 0.083 0.917 43 H 0.255 0.745 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.785 -1.155 -6.232 10.833 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.233 4.233 2 C -0.002 4.002 3 N -0.050 5.050 4 N -0.106 5.106 5 C -0.157 4.157 6 C -0.162 4.162 7 Cl 0.008 6.992 8 C -0.118 4.118 9 C 0.362 3.638 10 O -0.418 6.418 11 N -0.302 5.302 12 C -0.024 4.024 13 C 0.026 3.974 14 H 0.099 0.901 15 C -0.163 4.163 16 C -0.182 4.182 17 C 0.061 3.939 18 H 0.142 0.858 19 C -0.018 4.018 20 N -0.304 5.304 21 C -0.352 4.352 22 H 0.095 0.905 23 C -0.200 4.200 24 N -0.563 5.563 25 Si 0.742 3.258 26 H -0.212 1.212 27 H -0.216 1.216 28 H -0.212 1.212 29 H 0.089 0.911 30 H 0.095 0.905 31 H 0.101 0.899 32 H 0.117 0.883 33 H 0.122 0.878 34 H 0.209 0.791 35 H 0.086 0.914 36 H 0.097 0.903 37 H 0.074 0.926 38 H 0.074 0.926 39 H 0.078 0.922 40 H 0.072 0.928 41 H 0.077 0.923 42 H 0.101 0.899 43 H 0.065 0.935 Dipole moment (debyes) X Y Z Total from point charges 8.657 -2.168 -6.822 11.233 hybrid contribution -0.665 0.567 0.919 1.268 sum 7.992 -1.601 -5.903 10.064 Atomic orbital electron populations 1.22261 0.92479 1.03851 1.04677 1.22093 0.96725 0.76104 1.05229 1.45692 1.45241 1.12449 1.01649 1.73173 1.19449 1.04316 1.13620 1.23440 1.04070 0.95475 0.92673 1.21185 1.12157 0.90258 0.92557 1.98342 1.88101 1.42303 1.70499 1.21292 1.07178 0.93160 0.90193 1.16938 0.83750 0.79698 0.83381 1.90796 1.34800 1.45825 1.70401 1.48223 1.12285 1.53848 1.15814 1.22523 1.00972 0.97621 0.81300 1.21973 0.87120 0.92502 0.95808 0.90111 1.22475 0.98182 0.97351 0.98313 1.22743 0.98799 0.98910 0.97701 1.21821 0.94719 0.90396 0.86974 0.85824 1.22592 0.85653 0.96853 0.96678 1.45197 0.99546 1.59177 1.26513 1.18983 0.81530 1.37560 0.97110 0.90490 1.24772 0.97950 1.01997 0.95279 1.69787 1.28776 1.53773 1.03953 0.86202 0.83755 0.77908 0.77887 1.21168 1.21619 1.21161 0.91083 0.90545 0.89918 0.88333 0.87754 0.79081 0.91421 0.90331 0.92636 0.92601 0.92204 0.92792 0.92332 0.89856 0.93455 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.07 10.24 37.16 0.38 -1.69 16 2 C 0.12 1.40 6.90 -4.04 -0.03 1.37 16 3 N -0.26 -3.88 3.35 -57.11 -0.19 -4.07 16 4 N -0.28 -4.01 11.89 30.61 0.36 -3.64 16 5 C 0.02 0.30 12.04 -17.39 -0.21 0.09 16 6 C -0.12 -1.92 6.67 -38.88 -0.26 -2.18 16 7 Cl -0.02 -0.31 27.74 -51.86 -1.44 -1.75 16 8 C 0.01 0.21 4.83 -82.00 -0.40 -0.19 16 9 C 0.58 10.57 6.81 -12.70 -0.09 10.48 16 10 O -0.54 -11.07 16.57 5.24 0.09 -10.99 16 11 N -0.57 -10.44 2.26 -173.23 -0.39 -10.84 16 12 C 0.10 1.82 5.92 -3.22 -0.02 1.80 16 13 C 0.13 2.58 4.32 -65.66 -0.28 2.29 16 14 H 0.08 1.47 8.14 -51.93 -0.42 1.05 16 15 C -0.12 -2.23 6.18 -25.25 -0.16 -2.39 16 16 C -0.14 -2.69 6.18 -25.25 -0.16 -2.84 16 17 C 0.17 3.60 3.14 -65.90 -0.21 3.39 16 18 H 0.12 3.03 6.23 -51.93 -0.32 2.71 16 19 C 0.11 2.06 5.24 -3.47 -0.02 2.04 16 20 N -0.58 -13.19 2.82 -152.86 -0.43 -13.62 16 21 C -0.22 -5.60 10.38 -15.06 -0.16 -5.75 16 22 H 0.08 1.89 7.85 -52.49 -0.41 1.47 16 23 C 0.00 -0.08 5.42 -17.43 -0.09 -0.18 16 24 N -0.92 -23.75 10.51 55.49 0.58 -23.16 16 25 Si 0.91 20.51 29.56 -169.99 -5.03 15.49 16 26 H -0.29 -6.45 7.11 56.52 0.40 -6.04 16 27 H -0.29 -6.65 7.11 56.52 0.40 -6.25 16 28 H -0.29 -6.38 7.11 56.52 0.40 -5.98 16 29 H 0.07 0.87 8.14 -51.93 -0.42 0.44 16 30 H 0.08 1.12 6.33 -51.93 -0.33 0.79 16 31 H 0.08 0.78 8.14 -51.93 -0.42 0.36 16 32 H 0.10 1.18 7.68 -51.93 -0.40 0.78 16 33 H 0.10 0.98 8.14 -51.93 -0.42 0.56 16 34 H 0.19 1.93 8.06 -52.49 -0.42 1.50 16 35 H 0.07 1.27 8.14 -51.93 -0.42 0.84 16 36 H 0.08 1.38 7.08 -51.93 -0.37 1.01 16 37 H 0.05 0.95 8.14 -51.93 -0.42 0.52 16 38 H 0.06 0.99 7.84 -51.93 -0.41 0.59 16 39 H 0.06 1.07 6.26 -51.93 -0.32 0.75 16 40 H 0.05 1.01 8.14 -51.93 -0.42 0.58 16 41 H 0.06 1.12 6.37 -51.93 -0.33 0.79 16 42 H 0.08 1.82 6.67 -51.93 -0.35 1.48 16 43 H 0.26 6.56 8.31 -40.82 -0.34 6.22 16 LS Contribution 355.95 15.07 5.36 5.36 Total: -1.00 -28.26 355.95 -8.53 -36.79 By element: Atomic # 1 Polarization: 9.93 SS G_CDS: -5.76 Total: 4.17 kcal Atomic # 6 Polarization: 7.95 SS G_CDS: -1.69 Total: 6.26 kcal Atomic # 7 Polarization: -55.27 SS G_CDS: -0.07 Total: -55.33 kcal Atomic # 8 Polarization: -11.07 SS G_CDS: 0.09 Total: -10.99 kcal Atomic # 14 Polarization: 20.51 SS G_CDS: -5.03 Total: 15.49 kcal Atomic # 17 Polarization: -0.31 SS G_CDS: -1.44 Total: -1.75 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -28.26 -8.53 -36.79 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001029322368.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 118.268 kcal (2) G-P(sol) polarization free energy of solvation -28.262 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 90.006 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.526 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.788 kcal (6) G-S(sol) free energy of system = (1) + (5) 81.480 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds