Wall clock time and date at job start Tue Mar 31 2020 21:54:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.53002 * 112.85116 * 2 1 4 4 C 1.53785 * 113.61443 * 228.69734 * 2 1 3 5 5 H 1.08999 * 113.60950 * 105.46742 * 4 2 1 6 6 O 1.42898 * 113.61392 * 334.64932 * 4 2 1 7 7 C 1.53779 * 87.07958 * 220.01606 * 4 2 1 8 8 C 1.53775 * 87.08398 * 25.43418 * 7 4 2 9 9 H 1.08999 * 113.69496 * 89.12710 * 8 7 4 10 10 N 1.46504 * 113.61233 * 220.02010 * 8 7 4 11 11 C 1.34775 * 119.99457 * 252.49466 * 10 8 7 12 12 O 1.21593 * 120.00686 * 359.97438 * 11 10 8 13 13 N 1.34782 * 119.99576 * 180.02562 * 11 10 8 14 14 C 1.40136 * 119.99784 * 175.91552 * 13 11 10 15 15 C 1.38693 * 120.07736 * 34.56929 * 14 13 11 16 16 C 1.38196 * 120.02196 * 179.97438 * 15 14 13 17 17 C 1.38547 * 120.17752 * 0.02562 * 16 15 14 18 18 F 1.35095 * 119.92776 * 179.97438 * 17 16 15 19 19 C 1.38346 * 120.14688 * 0.02562 * 17 16 15 20 20 C 1.38739 * 119.98022 * 359.74558 * 19 17 16 21 21 O 1.35776 * 120.08979 * 180.27235 * 20 19 17 22 22 C 1.34802 * 117.00094 * 5.43897 * 21 20 19 23 23 H 1.08000 * 119.99992 * 354.95147 * 22 21 20 24 24 C 1.38641 * 119.99987 * 174.95167 * 22 21 20 25 25 N 1.31569 * 120.00094 * 0.02562 * 24 22 21 26 26 Si 1.86799 * 119.99810 * 179.97438 * 24 22 21 27 27 H 1.48502 * 109.47032 * 59.99935 * 26 24 22 28 28 H 1.48503 * 109.46906 * 180.02562 * 26 24 22 29 29 H 1.48501 * 109.47178 * 300.00111 * 26 24 22 30 30 H 1.09003 * 109.47041 * 288.79573 * 1 2 3 31 31 H 1.08994 * 109.47428 * 48.79820 * 1 2 3 32 32 H 1.09002 * 109.47285 * 168.80651 * 1 2 3 33 33 H 1.08996 * 109.47306 * 191.19452 * 3 2 1 34 34 H 1.08996 * 109.47345 * 311.20346 * 3 2 1 35 35 H 1.09005 * 109.46594 * 71.19769 * 3 2 1 36 36 H 0.96701 * 114.00196 * 179.97438 * 6 4 2 37 37 H 1.08994 * 113.61462 * 270.87726 * 7 4 2 38 38 H 1.09010 * 113.61117 * 139.98284 * 7 4 2 39 39 H 0.97000 * 120.00177 * 72.49428 * 10 8 7 40 40 H 0.96999 * 120.00055 * 355.63382 * 13 11 10 41 41 H 1.08001 * 119.98910 * 0.02562 * 15 14 13 42 42 H 1.07997 * 119.91332 * 179.97438 * 16 15 14 43 43 H 1.08004 * 120.01350 * 180.02562 * 19 17 16 44 44 H 0.96994 * 119.99963 * 179.97438 * 25 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.1241 1.4099 0.0000 4 6 2.1460 -0.9300 -1.0585 5 1 2.5649 -0.4005 -1.9142 6 8 1.2911 -2.0102 -1.4386 7 6 3.1923 -1.3135 0.0011 8 6 2.1461 -0.9281 1.0602 9 1 1.4940 -1.7515 1.3516 10 7 2.7093 -0.2144 2.2089 11 6 2.8174 -0.8347 3.4006 12 8 2.4472 -1.9864 3.5224 13 7 3.3351 -0.1779 4.4576 14 6 3.3690 -0.7927 5.7164 15 6 3.5760 -2.1604 5.8166 16 6 3.6098 -2.7654 7.0586 17 6 3.4366 -2.0093 8.2066 18 9 3.4700 -2.6061 9.4182 19 6 3.2285 -0.6447 8.1149 20 6 3.1982 -0.0300 6.8715 21 8 2.9997 1.3100 6.7792 22 6 2.9515 2.0026 7.9347 23 1 2.9867 1.4801 8.8793 24 6 2.8567 3.3855 7.9105 25 7 2.8133 4.0220 6.7598 26 14 2.7892 4.3451 9.5118 27 1 4.0216 4.0837 10.2979 28 1 2.6893 5.7968 9.2150 29 1 1.6023 3.9178 10.2953 30 1 -0.3633 0.3311 0.9729 31 1 -0.3634 0.6769 -0.7731 32 1 -0.3634 -1.0081 -0.1995 33 1 3.1942 1.3533 -0.1995 34 1 1.6414 2.0077 -0.7731 35 1 1.9599 1.8733 0.9729 36 1 1.6729 -2.5984 -2.1044 37 1 4.0710 -0.6687 0.0005 38 1 3.4444 -2.3741 0.0021 39 1 3.0043 0.7046 2.1119 40 1 3.6879 0.7188 4.3461 41 1 3.7118 -2.7527 4.9238 42 1 3.7707 -3.8307 7.1346 43 1 3.0942 -0.0572 9.0112 44 1 2.7466 4.9895 6.7430 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000189146785.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 21:54:45 Heat of formation + Delta-G solvation = -98.631149 kcal Electronic energy + Delta-G solvation = -29428.940804 eV Core-core repulsion = 25069.719657 eV Total energy + Delta-G solvation = -4359.221147 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 338.147 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -48.22428 -40.85444 -39.79850 -38.52496 -36.38794 -35.59614 -33.99738 -33.02604 -32.39886 -30.57423 -29.37524 -28.17043 -27.62398 -25.50616 -24.54336 -22.80453 -22.34897 -21.59338 -20.43557 -19.00806 -18.31435 -18.15452 -17.78862 -17.28331 -16.53719 -15.79073 -15.38903 -15.33206 -15.21202 -14.99501 -14.70064 -14.55871 -14.27701 -13.78150 -13.73653 -13.57828 -13.48129 -13.25523 -12.85403 -12.65284 -12.51148 -12.34953 -12.26069 -12.11931 -11.89120 -11.65438 -11.37099 -11.18743 -11.05943 -10.90853 -10.71903 -10.56567 -10.27642 -9.97048 -9.82704 -9.73699 -9.41776 -8.95092 -8.86503 -7.84532 -7.07548 -6.59824 -4.17514 1.88506 2.15392 2.94662 3.07896 3.08218 3.10677 3.46811 3.69929 3.85735 4.21965 4.37847 4.39864 4.50437 4.66740 4.82087 4.88470 4.96909 5.00120 5.14488 5.17509 5.41388 5.44414 5.48153 5.60935 5.70192 5.74941 5.76594 5.83128 5.85562 5.99094 6.06435 6.14018 6.23917 6.32520 6.57631 6.67767 6.74630 6.93713 6.96301 7.09979 7.18334 7.34495 7.38815 7.69360 7.84619 8.30364 8.85732 8.90211 9.48287 10.57226 Molecular weight = 338.15amu Principal moments of inertia in cm(-1) A = 0.010955 B = 0.003284 C = 0.002617 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2555.244880 B = 8524.034978 C =10698.053571 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C -0.085 4.085 3 C -0.136 4.136 4 C 0.089 3.911 5 H 0.071 0.929 6 O -0.546 6.546 7 C -0.185 4.185 8 C 0.161 3.839 9 H 0.120 0.880 10 N -0.736 5.736 11 C 0.704 3.296 12 O -0.585 6.585 13 N -0.665 5.665 14 C 0.078 3.922 15 C -0.050 4.050 16 C -0.228 4.228 17 C 0.127 3.873 18 F -0.152 7.152 19 C -0.258 4.258 20 C 0.157 3.843 21 O -0.168 6.168 22 C -0.393 4.393 23 H 0.094 0.906 24 C 0.044 3.956 25 N -0.861 5.861 26 Si 0.942 3.058 27 H -0.269 1.269 28 H -0.277 1.277 29 H -0.269 1.269 30 H 0.057 0.943 31 H 0.054 0.946 32 H 0.070 0.930 33 H 0.061 0.939 34 H 0.065 0.935 35 H 0.070 0.930 36 H 0.379 0.621 37 H 0.091 0.909 38 H 0.077 0.923 39 H 0.398 0.602 40 H 0.410 0.590 41 H 0.143 0.857 42 H 0.122 0.878 43 H 0.143 0.857 44 H 0.272 0.728 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.269 -5.295 -14.762 15.734 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 C -0.086 4.086 3 C -0.193 4.193 4 C 0.029 3.971 5 H 0.089 0.911 6 O -0.351 6.351 7 C -0.225 4.225 8 C 0.055 3.945 9 H 0.137 0.863 10 N -0.391 5.391 11 C 0.405 3.595 12 O -0.463 6.463 13 N -0.312 5.312 14 C -0.017 4.017 15 C -0.071 4.071 16 C -0.248 4.248 17 C 0.107 3.893 18 F -0.131 7.131 19 C -0.279 4.279 20 C 0.101 3.899 21 O -0.071 6.071 22 C -0.469 4.469 23 H 0.111 0.889 24 C -0.161 4.161 25 N -0.495 5.495 26 Si 0.766 3.234 27 H -0.194 1.194 28 H -0.202 1.202 29 H -0.194 1.194 30 H 0.076 0.924 31 H 0.073 0.927 32 H 0.089 0.911 33 H 0.080 0.920 34 H 0.084 0.916 35 H 0.089 0.911 36 H 0.227 0.773 37 H 0.109 0.891 38 H 0.096 0.904 39 H 0.233 0.767 40 H 0.246 0.754 41 H 0.160 0.840 42 H 0.140 0.860 43 H 0.160 0.840 44 H 0.082 0.918 Dipole moment (debyes) X Y Z Total from point charges 0.457 -5.629 -14.471 15.534 hybrid contribution 0.657 1.053 0.648 1.400 sum 1.114 -4.576 -13.824 14.604 Atomic orbital electron populations 1.21602 0.93013 1.02805 1.01646 1.22389 0.97046 0.94749 0.94441 1.21620 1.00683 0.93935 1.03093 1.22622 0.90831 0.88637 0.95044 0.91083 1.86464 1.44189 1.41248 1.63208 1.24159 0.98305 1.02804 0.97222 1.22363 0.94676 0.95064 0.82395 0.86266 1.45142 1.68185 1.16867 1.08877 1.15946 0.78357 0.84920 0.80283 1.90867 1.55698 1.16155 1.83626 1.42206 1.62999 1.19849 1.06127 1.16649 1.11588 0.91776 0.81643 1.20670 0.96672 0.92345 0.97406 1.20485 1.13670 0.99702 0.90968 1.17455 1.01419 0.90766 0.79622 1.91406 1.94134 1.84163 1.43370 1.20838 1.14921 0.93273 0.98895 1.18817 0.94054 0.85839 0.91208 1.83929 1.77067 1.12383 1.33751 1.21304 1.52840 0.88912 0.83813 0.88910 1.25262 0.96205 0.95540 0.99121 1.69996 1.45388 1.09312 1.24805 0.85760 0.79390 0.78352 0.79902 1.19363 1.20212 1.19385 0.92394 0.92715 0.91142 0.91977 0.91607 0.91068 0.77301 0.89096 0.90434 0.76682 0.75418 0.83985 0.85982 0.83999 0.91842 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -1.43 9.04 37.15 0.34 -1.09 16 2 C -0.09 -0.84 1.35 -153.69 -0.21 -1.05 16 3 C -0.14 -1.15 8.05 37.16 0.30 -0.85 16 4 C 0.09 0.75 4.69 -25.92 -0.12 0.63 16 5 H 0.07 0.48 8.10 -51.93 -0.42 0.06 16 6 O -0.55 -4.78 12.13 -35.23 -0.43 -5.20 16 7 C -0.19 -1.78 7.36 -25.92 -0.19 -1.97 16 8 C 0.16 1.97 3.63 -67.12 -0.24 1.73 16 9 H 0.12 1.79 7.42 -51.93 -0.39 1.41 16 10 N -0.74 -9.98 5.23 -57.88 -0.30 -10.28 16 11 C 0.70 12.50 8.41 -86.91 -0.73 11.77 16 12 O -0.59 -12.01 13.37 5.28 0.07 -11.94 16 13 N -0.67 -12.43 5.20 -14.07 -0.07 -12.51 16 14 C 0.08 1.65 6.33 -83.43 -0.53 1.13 16 15 C -0.05 -0.99 8.69 -39.43 -0.34 -1.33 16 16 C -0.23 -4.33 10.02 -39.48 -0.40 -4.72 16 17 C 0.13 2.58 7.29 -39.43 -0.29 2.30 16 18 F -0.15 -2.95 17.26 2.25 0.04 -2.91 16 19 C -0.26 -5.71 9.14 -39.36 -0.36 -6.06 16 20 C 0.16 3.65 6.66 -38.94 -0.26 3.39 16 21 O -0.17 -4.40 9.31 0.05 0.00 -4.40 16 22 C -0.39 -10.37 9.49 30.88 0.29 -10.07 16 23 H 0.09 2.31 5.20 -52.49 -0.27 2.03 16 24 C 0.04 1.13 5.49 -17.52 -0.10 1.03 16 25 N -0.86 -23.33 13.67 55.48 0.76 -22.57 16 26 Si 0.94 19.67 29.55 -169.99 -5.02 14.65 16 27 H -0.27 -5.47 7.11 56.52 0.40 -5.07 16 28 H -0.28 -5.65 7.11 56.52 0.40 -5.25 16 29 H -0.27 -5.52 7.11 56.52 0.40 -5.12 16 30 H 0.06 0.68 8.14 -51.93 -0.42 0.26 16 31 H 0.05 0.52 8.14 -51.93 -0.42 0.09 16 32 H 0.07 0.81 6.96 -51.93 -0.36 0.45 16 33 H 0.06 0.45 7.35 -51.93 -0.38 0.07 16 34 H 0.06 0.49 8.14 -51.93 -0.42 0.07 16 35 H 0.07 0.66 7.10 -51.93 -0.37 0.29 16 36 H 0.38 1.66 9.12 45.56 0.42 2.07 16 37 H 0.09 0.79 7.66 -51.93 -0.40 0.39 16 38 H 0.08 0.78 8.14 -51.92 -0.42 0.35 16 39 H 0.40 4.61 6.68 -40.82 -0.27 4.34 16 40 H 0.41 7.25 8.58 -40.82 -0.35 6.90 16 41 H 0.14 2.74 6.20 -52.49 -0.33 2.41 16 42 H 0.12 2.00 8.06 -52.49 -0.42 1.58 16 43 H 0.14 3.12 5.64 -52.48 -0.30 2.82 16 44 H 0.27 6.82 8.31 -40.82 -0.34 6.48 16 LS Contribution 367.63 15.07 5.54 5.54 Total: -1.00 -31.25 367.63 -6.92 -38.17 By element: Atomic # 1 Polarization: 21.31 SS G_CDS: -4.67 Total: 16.64 kcal Atomic # 6 Polarization: -2.35 SS G_CDS: -2.83 Total: -5.18 kcal Atomic # 7 Polarization: -45.74 SS G_CDS: 0.38 Total: -45.36 kcal Atomic # 8 Polarization: -21.19 SS G_CDS: -0.36 Total: -21.55 kcal Atomic # 9 Polarization: -2.95 SS G_CDS: 0.04 Total: -2.91 kcal Atomic # 14 Polarization: 19.67 SS G_CDS: -5.02 Total: 14.65 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -31.25 -6.92 -38.17 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000189146785.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.465 kcal (2) G-P(sol) polarization free energy of solvation -31.248 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.713 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.918 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.166 kcal (6) G-S(sol) free energy of system = (1) + (5) -98.631 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds