Wall clock time and date at job start Tue Mar 31 2020 21:41:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46896 * 111.00288 * 2 1 4 4 C 1.53001 * 109.47240 * 199.81229 * 3 2 1 5 5 O 1.42902 * 109.47327 * 65.10307 * 4 3 2 6 6 C 1.35938 * 116.99696 * 180.02562 * 5 4 3 7 7 C 1.38706 * 120.03587 * 0.27691 * 6 5 4 8 8 C 1.38157 * 119.97450 * 180.25145 * 7 6 5 9 9 C 1.38454 * 120.02497 * 359.47056 * 8 7 6 10 10 F 1.35099 * 119.97079 * 180.30077 * 9 8 7 11 11 C 1.38455 * 120.06144 * 0.27495 * 9 8 7 12 12 C 1.38146 * 120.03058 * 359.97438 * 11 9 8 13 13 C 1.46899 * 111.00089 * 123.95705 * 2 1 3 14 14 C 1.52997 * 109.47482 * 66.04415 * 13 2 1 15 15 C 1.50697 * 109.47251 * 180.02562 * 14 13 2 16 16 O 1.21283 * 119.99920 * 359.97438 * 15 14 13 17 17 N 1.34779 * 119.99905 * 180.02562 * 15 14 13 18 18 C 1.46497 * 120.00078 * 359.97438 * 17 15 14 19 19 C 1.46497 * 119.99849 * 179.97438 * 17 15 14 20 20 C 1.50701 * 109.46982 * 89.99949 * 19 17 15 21 21 H 1.08002 * 120.00176 * 0.02562 * 20 19 17 22 22 C 1.37881 * 120.00184 * 179.97438 * 20 19 17 23 23 N 1.31510 * 119.99877 * 359.97438 * 22 20 19 24 24 Si 1.86798 * 120.00101 * 180.02562 * 22 20 19 25 25 H 1.48492 * 109.47270 * 59.99702 * 24 22 20 26 26 H 1.48504 * 109.47131 * 180.02562 * 24 22 20 27 27 H 1.48502 * 109.46894 * 299.99789 * 24 22 20 28 28 H 1.09002 * 109.47049 * 54.02912 * 1 2 3 29 29 H 1.08998 * 109.46650 * 174.02675 * 1 2 3 30 30 H 1.08996 * 109.46858 * 294.03092 * 1 2 3 31 31 H 1.08997 * 109.47528 * 79.81067 * 3 2 1 32 32 H 1.09008 * 109.47102 * 319.80748 * 3 2 1 33 33 H 1.08999 * 109.46810 * 305.09654 * 4 3 2 34 34 H 1.09005 * 109.47070 * 185.10315 * 4 3 2 35 35 H 1.08005 * 120.01390 * 0.02562 * 7 6 5 36 36 H 1.07993 * 119.98465 * 179.74778 * 8 7 6 37 37 H 1.08001 * 119.98559 * 180.02562 * 11 9 8 38 38 H 1.08004 * 120.01563 * 180.02562 * 12 11 9 39 39 H 1.09006 * 109.47295 * 186.04436 * 13 2 1 40 40 H 1.09004 * 109.47155 * 306.04314 * 13 2 1 41 41 H 1.09006 * 109.46873 * 300.00279 * 14 13 2 42 42 H 1.09004 * 109.47009 * 59.99809 * 14 13 2 43 43 H 1.08993 * 109.47554 * 89.99816 * 18 17 15 44 44 H 1.09003 * 109.46826 * 210.00489 * 18 17 15 45 45 H 1.09000 * 109.46899 * 329.99658 * 18 17 15 46 46 H 1.08996 * 109.47249 * 209.99778 * 19 17 15 47 47 H 1.09004 * 109.47440 * 330.00146 * 19 17 15 48 48 H 0.96999 * 120.00060 * 180.02562 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 3.4453 1.3611 -0.4889 5 8 3.4844 0.9434 -1.8550 6 6 4.7069 0.8791 -2.4458 7 6 5.8452 1.2057 -1.7235 8 6 7.0866 1.1449 -2.3268 9 6 7.1958 0.7476 -3.6486 10 9 8.4108 0.6827 -4.2356 11 6 6.0610 0.4162 -4.3693 12 6 4.8180 0.4811 -3.7700 13 6 1.9955 -0.7660 1.1375 14 6 1.6315 -2.2426 0.9703 15 6 2.1711 -3.0283 2.1376 16 8 2.7866 -2.4630 3.0165 17 7 1.9705 -4.3594 2.2043 18 6 1.2275 -5.0424 1.1424 19 6 2.4955 -5.1233 3.3388 20 6 1.4631 -5.1670 4.4357 21 1 0.5109 -4.6754 4.3011 22 6 1.7336 -5.8356 5.6109 23 7 2.8924 -6.4356 5.7742 24 14 0.4537 -5.8904 6.9703 25 1 -0.7801 -6.5423 6.4625 26 1 0.9859 -6.6646 8.1204 27 1 0.1380 -4.5072 7.4090 28 1 -0.3633 0.6036 -0.8317 29 1 -0.3632 -1.0221 -0.1069 30 1 -0.3633 0.4185 0.9386 31 1 1.9560 1.7758 1.0114 32 1 1.3928 1.9920 -0.6633 33 1 4.0289 0.6700 0.1193 34 1 3.8647 2.3636 -0.4034 35 1 5.7607 1.5109 -0.6910 36 1 7.9725 1.4031 -1.7658 37 1 6.1476 0.1060 -5.4001 38 1 3.9329 0.2221 -4.3322 39 1 3.0798 -0.6612 1.1756 40 1 1.5612 -0.3873 2.0628 41 1 0.5472 -2.3475 0.9323 42 1 2.0658 -2.6214 0.0450 43 1 1.9200 -5.3696 0.3670 44 1 0.7124 -5.9082 1.5585 45 1 0.4971 -4.3575 0.7118 46 1 2.7271 -6.1387 3.0171 47 1 3.4012 -4.6446 3.7112 48 1 3.0827 -6.9062 6.6008 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000130896079.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 21:41:44 Heat of formation + Delta-G solvation = -84.523843 kcal Electronic energy + Delta-G solvation = -28661.335583 eV Core-core repulsion = 24438.559269 eV Total energy + Delta-G solvation = -4222.776314 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 338.179 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -49.03334 -40.35697 -39.17308 -37.99518 -36.91605 -34.79553 -32.68574 -31.85518 -31.42590 -30.20809 -29.00380 -27.82732 -26.12990 -25.52790 -24.29932 -23.14823 -22.60889 -21.97586 -20.62925 -18.62417 -18.35265 -17.59927 -16.90317 -16.69445 -16.51683 -16.30266 -15.77049 -15.46491 -15.32451 -15.06820 -14.85200 -14.59765 -14.51580 -14.18703 -13.95235 -13.74626 -13.42451 -13.19846 -12.77517 -12.72432 -12.49665 -12.38128 -12.21718 -12.12136 -11.88654 -11.73592 -11.59715 -11.50139 -11.14877 -11.07107 -10.95831 -10.91721 -10.63943 -10.54188 -10.16567 -9.64797 -9.48902 -8.89303 -8.46541 -8.44025 -8.32464 -7.63379 -6.04746 -4.09657 0.86207 0.96060 2.92210 3.29972 3.30490 3.34930 3.36548 3.46317 3.59336 4.05412 4.12065 4.37147 4.44309 4.47453 4.64887 4.73815 4.82010 4.95960 4.99924 5.06644 5.14353 5.20089 5.26848 5.31243 5.33834 5.37752 5.46231 5.52214 5.57967 5.61714 5.75489 5.83410 5.85950 5.89731 5.93650 5.95844 6.05906 6.09136 6.23104 6.42340 6.86639 6.90497 7.06934 7.16020 7.44431 7.54599 7.91528 8.23243 8.43183 8.89508 9.10143 9.55277 11.03317 Molecular weight = 338.18amu Principal moments of inertia in cm(-1) A = 0.013912 B = 0.002146 C = 0.001990 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2012.114332 B =13043.303717 C =14066.047842 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 N -0.539 5.539 3 C 0.056 3.944 4 C 0.062 3.938 5 O -0.293 6.293 6 C 0.129 3.871 7 C -0.184 4.184 8 C -0.111 4.111 9 C 0.051 3.949 10 F -0.144 7.144 11 C -0.113 4.113 12 C -0.126 4.126 13 C 0.069 3.931 14 C -0.134 4.134 15 C 0.504 3.496 16 O -0.547 6.547 17 N -0.603 5.603 18 C 0.084 3.916 19 C 0.245 3.755 20 C -0.526 4.526 21 H 0.056 0.944 22 C 0.060 3.940 23 N -0.895 5.895 24 Si 0.898 3.102 25 H -0.277 1.277 26 H -0.286 1.286 27 H -0.277 1.277 28 H 0.067 0.933 29 H 0.072 0.928 30 H 0.026 0.974 31 H 0.061 0.939 32 H 0.085 0.915 33 H 0.069 0.931 34 H 0.066 0.934 35 H 0.137 0.863 36 H 0.136 0.864 37 H 0.140 0.860 38 H 0.141 0.859 39 H 0.080 0.920 40 H 0.045 0.955 41 H 0.086 0.914 42 H 0.093 0.907 43 H 0.044 0.956 44 H 0.073 0.927 45 H 0.057 0.943 46 H 0.032 0.968 47 H 0.043 0.957 48 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.630 16.699 -20.140 26.170 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.126 4.126 2 N -0.263 5.263 3 C -0.072 4.072 4 C -0.014 4.014 5 O -0.205 6.205 6 C 0.083 3.917 7 C -0.203 4.203 8 C -0.130 4.130 9 C 0.032 3.968 10 F -0.123 7.123 11 C -0.132 4.132 12 C -0.144 4.144 13 C -0.059 4.059 14 C -0.175 4.175 15 C 0.290 3.710 16 O -0.426 6.426 17 N -0.335 5.335 18 C -0.060 4.060 19 C 0.125 3.875 20 C -0.565 4.565 21 H 0.074 0.926 22 C -0.142 4.142 23 N -0.534 5.534 24 Si 0.726 3.274 25 H -0.202 1.202 26 H -0.211 1.211 27 H -0.202 1.202 28 H 0.085 0.915 29 H 0.091 0.909 30 H 0.045 0.955 31 H 0.079 0.921 32 H 0.103 0.897 33 H 0.087 0.913 34 H 0.084 0.916 35 H 0.155 0.845 36 H 0.154 0.846 37 H 0.158 0.842 38 H 0.159 0.841 39 H 0.098 0.902 40 H 0.063 0.937 41 H 0.104 0.896 42 H 0.111 0.889 43 H 0.063 0.937 44 H 0.091 0.909 45 H 0.076 0.924 46 H 0.050 0.950 47 H 0.061 0.939 48 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges 1.066 16.581 -20.052 26.041 hybrid contribution -0.625 0.176 1.639 1.762 sum 0.441 16.757 -18.414 24.901 Atomic orbital electron populations 1.22438 0.87104 1.02759 1.00266 1.61952 1.08017 1.12468 1.43841 1.22127 0.94116 0.90758 1.00214 1.22962 0.98433 0.99277 0.80710 1.86191 1.25298 1.82287 1.26770 1.19091 0.84731 0.95338 0.92576 1.21172 0.91676 1.06393 1.01070 1.20949 0.98611 1.00072 0.93348 1.17572 0.80491 1.06358 0.92369 1.91484 1.42022 1.94544 1.84212 1.20952 0.90777 1.00728 1.00726 1.20285 0.97872 1.03517 0.92749 1.21907 1.00832 0.92422 0.90738 1.21626 1.02247 0.94983 0.98627 1.20312 0.80843 0.82697 0.87105 1.90656 1.42069 1.69152 1.40699 1.48158 1.54009 1.07227 1.24116 1.21633 0.95649 0.98258 0.90474 1.19277 0.95469 0.90518 0.82193 1.21390 1.01354 1.33546 1.00207 0.92601 1.24943 0.95637 0.95323 0.98254 1.69921 1.22004 1.34767 1.26704 0.86558 0.81423 0.78151 0.81277 1.20244 1.21146 1.20227 0.91451 0.90882 0.95502 0.92060 0.89658 0.91315 0.91609 0.84500 0.84573 0.84199 0.84116 0.90209 0.93701 0.89569 0.88852 0.93702 0.90860 0.92426 0.95037 0.93883 0.92650 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.21 9.25 60.07 0.56 0.77 16 2 N -0.54 -5.89 4.64 -242.92 -1.13 -7.01 16 3 C 0.06 0.49 5.39 -3.83 -0.02 0.47 16 4 C 0.06 0.54 4.93 37.16 0.18 0.73 16 5 O -0.29 -3.08 10.09 -19.55 -0.20 -3.27 16 6 C 0.13 1.30 6.69 -39.23 -0.26 1.03 16 7 C -0.18 -1.70 9.04 -39.44 -0.36 -2.06 16 8 C -0.11 -1.02 10.02 -39.53 -0.40 -1.42 16 9 C 0.05 0.51 7.30 -39.42 -0.29 0.22 16 10 F -0.14 -1.54 17.27 2.25 0.04 -1.50 16 11 C -0.11 -0.98 10.02 -39.54 -0.40 -1.38 16 12 C -0.13 -1.14 9.98 -39.44 -0.39 -1.53 16 13 C 0.07 0.93 4.07 -3.83 -0.02 0.92 16 14 C -0.13 -1.97 4.17 -27.89 -0.12 -2.08 16 15 C 0.50 10.40 7.67 -10.99 -0.08 10.32 16 16 O -0.55 -13.62 15.56 5.55 0.09 -13.53 16 17 N -0.60 -12.89 2.86 -182.96 -0.52 -13.41 16 18 C 0.08 1.34 10.24 59.85 0.61 1.95 16 19 C 0.24 6.48 5.16 -5.20 -0.03 6.45 16 20 C -0.53 -15.01 9.39 -34.44 -0.32 -15.34 16 21 H 0.06 1.59 7.81 -52.49 -0.41 1.18 16 22 C 0.06 1.74 5.46 -17.82 -0.10 1.64 16 23 N -0.90 -26.76 13.29 55.43 0.74 -26.03 16 24 Si 0.90 21.89 29.54 -169.99 -5.02 16.87 16 25 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 26 H -0.29 -6.85 7.11 56.52 0.40 -6.45 16 27 H -0.28 -6.76 7.11 56.52 0.40 -6.36 16 28 H 0.07 0.53 7.93 -51.93 -0.41 0.12 16 29 H 0.07 0.68 6.57 -51.93 -0.34 0.34 16 30 H 0.03 0.25 8.12 -51.93 -0.42 -0.17 16 31 H 0.06 0.50 8.00 -51.93 -0.42 0.09 16 32 H 0.08 0.65 7.80 -51.92 -0.40 0.25 16 33 H 0.07 0.66 6.17 -51.93 -0.32 0.34 16 34 H 0.07 0.44 7.68 -51.93 -0.40 0.04 16 35 H 0.14 1.05 6.30 -52.48 -0.33 0.72 16 36 H 0.14 1.02 8.06 -52.49 -0.42 0.60 16 37 H 0.14 0.91 8.06 -52.49 -0.42 0.49 16 38 H 0.14 1.07 8.06 -52.48 -0.42 0.65 16 39 H 0.08 1.15 6.53 -51.93 -0.34 0.81 16 40 H 0.04 0.67 8.07 -51.93 -0.42 0.25 16 41 H 0.09 1.13 5.86 -51.93 -0.30 0.82 16 42 H 0.09 1.26 8.11 -51.93 -0.42 0.83 16 43 H 0.04 0.62 8.14 -51.93 -0.42 0.20 16 44 H 0.07 1.20 8.07 -51.93 -0.42 0.78 16 45 H 0.06 0.74 6.44 -51.93 -0.33 0.41 16 46 H 0.03 0.84 8.07 -51.93 -0.42 0.42 16 47 H 0.04 1.28 7.42 -51.93 -0.39 0.90 16 48 H 0.26 7.45 8.31 -40.82 -0.34 7.11 16 LS Contribution 398.90 15.07 6.01 6.01 Total: -1.00 -34.20 398.90 -8.74 -42.94 By element: Atomic # 1 Polarization: 5.57 SS G_CDS: -7.32 Total: -1.75 kcal Atomic # 6 Polarization: 2.11 SS G_CDS: -1.42 Total: 0.68 kcal Atomic # 7 Polarization: -45.53 SS G_CDS: -0.91 Total: -46.45 kcal Atomic # 8 Polarization: -16.69 SS G_CDS: -0.11 Total: -16.80 kcal Atomic # 9 Polarization: -1.54 SS G_CDS: 0.04 Total: -1.50 kcal Atomic # 14 Polarization: 21.89 SS G_CDS: -5.02 Total: 16.87 kcal Total LS contribution 6.01 Total: 6.01 kcal Total: -34.20 -8.74 -42.94 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000130896079.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.585 kcal (2) G-P(sol) polarization free energy of solvation -34.197 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.783 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.741 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.938 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.524 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds