Wall clock time and date at job start Tue Mar 31 2020 21:05:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 O 1.21282 * 119.99795 * 2 1 4 4 N 1.34768 * 120.00096 * 180.02562 * 2 1 3 5 5 C 1.46504 * 119.99992 * 176.53929 * 4 2 1 6 6 H 1.08994 * 109.47109 * 33.76213 * 5 4 2 7 7 C 1.50696 * 109.47059 * 273.75745 * 5 4 2 8 8 O 1.20825 * 120.00329 * 339.99989 * 7 5 4 9 9 O 1.34229 * 119.99839 * 160.00017 * 7 5 4 10 10 C 1.45200 * 117.00192 * 179.97438 * 9 7 5 11 11 C 1.53076 * 109.45141 * 89.79072 * 10 9 7 12 12 C 1.53196 * 109.29495 * 181.24657 * 11 10 9 13 13 N 1.46924 * 108.89032 * 305.57586 * 12 11 10 14 14 C 1.36932 * 120.62951 * 233.51631 * 13 12 11 15 15 H 1.07998 * 120.00043 * 147.25079 * 14 13 12 16 16 C 1.38816 * 119.99943 * 327.25144 * 14 13 12 17 17 N 1.31618 * 120.00053 * 347.72588 * 16 14 13 18 18 Si 1.86801 * 119.99993 * 167.72879 * 16 14 13 19 19 H 1.48504 * 109.47081 * 59.99848 * 18 16 14 20 20 H 1.48501 * 109.47160 * 179.97438 * 18 16 14 21 21 H 1.48501 * 109.46997 * 299.99596 * 18 16 14 22 22 C 1.46924 * 118.73945 * 53.53895 * 13 12 11 23 23 C 1.53038 * 109.46320 * 209.99770 * 10 9 7 24 24 C 1.53003 * 109.46924 * 153.75906 * 5 4 2 25 25 C 1.54267 * 110.03345 * 56.51449 * 24 5 4 26 26 C 1.54960 * 104.15964 * 217.13683 * 25 24 5 27 27 C 1.54888 * 102.77869 * 37.88750 * 26 25 24 28 28 C 1.53876 * 110.03112 * 299.29361 * 24 5 4 29 29 H 1.09004 * 109.47193 * 179.97438 * 1 2 3 30 30 H 1.08999 * 109.47233 * 299.99673 * 1 2 3 31 31 H 1.09002 * 109.47383 * 59.99692 * 1 2 3 32 32 H 0.96997 * 120.00239 * 356.54110 * 4 2 1 33 33 H 1.08993 * 109.45940 * 329.97607 * 10 9 7 34 34 H 1.08994 * 109.39640 * 61.36674 * 11 10 9 35 35 H 1.09010 * 109.62101 * 301.25731 * 11 10 9 36 36 H 1.09000 * 109.58324 * 185.71844 * 12 11 10 37 37 H 1.08996 * 109.58491 * 65.43670 * 12 11 10 38 38 H 0.96998 * 119.99612 * 180.02562 * 17 16 14 39 39 H 1.08998 * 109.59054 * 66.17534 * 22 13 12 40 40 H 1.09001 * 109.58835 * 186.45873 * 22 13 12 41 41 H 1.09009 * 109.49144 * 58.66512 * 23 10 9 42 42 H 1.08995 * 109.49735 * 298.57118 * 23 10 9 43 43 H 1.09003 * 110.01428 * 177.90514 * 24 5 4 44 44 H 1.08996 * 110.48268 * 335.78195 * 25 24 5 45 45 H 1.09003 * 110.48604 * 98.42804 * 25 24 5 46 46 H 1.09007 * 110.72266 * 279.57677 * 26 25 24 47 47 H 1.08996 * 110.77101 * 156.22404 * 26 25 24 48 48 H 1.09003 * 110.48782 * 203.40732 * 27 26 25 49 49 H 1.08997 * 110.60125 * 80.82144 * 27 26 25 50 50 H 1.09003 * 110.03505 * 238.56864 * 28 24 5 51 51 H 1.08998 * 110.03526 * 359.95517 * 28 24 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1134 1.0504 0.0000 4 7 2.1808 -1.1671 -0.0005 5 6 3.6439 -1.1682 -0.0771 6 1 4.0359 -0.2976 0.4486 7 6 4.0713 -1.1177 -1.5213 8 8 3.2989 -1.4426 -2.3917 9 8 5.3102 -0.7117 -1.8407 10 6 5.6532 -0.6886 -3.2514 11 6 5.2988 0.6793 -3.8399 12 6 5.6332 0.6893 -5.3349 13 7 7.0389 0.2996 -5.5105 14 6 7.8986 1.0917 -6.2237 15 1 8.9417 1.1411 -5.9483 16 6 7.4293 1.8313 -7.3006 17 7 6.2299 1.5950 -7.7885 18 14 8.5000 3.1618 -8.0574 19 1 9.7602 2.5572 -8.5592 20 1 7.7741 3.7995 -9.1851 21 1 8.8171 4.1860 -7.0299 22 6 7.5046 -0.9563 -4.9068 23 6 7.1526 -0.9469 -3.4159 24 6 4.1875 -2.4429 0.5714 25 6 3.5725 -3.6846 -0.1069 26 6 3.3655 -4.6880 1.0557 27 6 2.9197 -3.7728 2.2230 28 6 3.7731 -2.4990 2.0522 29 1 -0.3634 -1.0277 -0.0005 30 1 -0.3634 0.5138 0.8900 31 1 -0.3634 0.5139 -0.8900 32 1 1.6972 -2.0064 0.0498 33 1 5.0918 -1.4628 -3.7743 34 1 5.8764 1.4522 -3.3328 35 1 4.2345 0.8717 -3.7039 36 1 5.4785 1.6904 -5.7372 37 1 4.9898 -0.0182 -5.8579 38 1 5.9022 2.1115 -8.5413 39 1 7.0137 -1.7995 -5.3928 40 1 8.5843 -1.0423 -5.0290 41 1 7.4059 -1.9117 -2.9762 42 1 7.7147 -0.1592 -2.9143 43 1 5.2739 -2.4707 0.4863 44 1 2.6176 -3.4334 -0.5683 45 1 4.2593 -4.0941 -0.8476 46 1 4.2993 -5.1957 1.2979 47 1 2.5854 -5.4085 0.8101 48 1 3.1301 -4.2472 3.1815 49 1 1.8591 -3.5353 2.1406 50 1 4.6583 -2.5549 2.6859 51 1 3.1854 -1.6177 2.3091 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000119348649.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 21:05:27 Heat of formation + Delta-G solvation = -119.503580 kcal Electronic energy + Delta-G solvation = -31029.741499 eV Core-core repulsion = 26928.908655 eV Total energy + Delta-G solvation = -4100.832844 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 338.204 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -41.05456 -39.55890 -38.48384 -37.32352 -35.77657 -34.52022 -32.70111 -31.47952 -30.22445 -29.70670 -29.20175 -29.10231 -26.29950 -24.90791 -22.46366 -22.18349 -21.53200 -21.07412 -20.45737 -19.81307 -19.26988 -17.60379 -17.35999 -17.10156 -16.68143 -16.07657 -15.75120 -15.50368 -15.14547 -14.83075 -14.55866 -13.98388 -13.76230 -13.67026 -13.58665 -13.54693 -13.26810 -12.87911 -12.81956 -12.65244 -12.45470 -12.36083 -11.75077 -11.50981 -11.50702 -11.43597 -11.27603 -11.14939 -11.09882 -11.01969 -10.95425 -10.73627 -10.66972 -10.44878 -10.28977 -10.19752 -10.14251 -9.93801 -9.71889 -9.37326 -9.31121 -8.47612 -6.63873 -5.79399 -3.28485 2.22412 2.39632 2.73313 3.18729 3.39383 3.44608 3.45857 4.13100 4.14451 4.29604 4.48893 4.56755 4.75751 4.84410 4.89788 4.98198 5.07491 5.14272 5.17034 5.23217 5.27538 5.29206 5.38562 5.41078 5.46201 5.52191 5.54757 5.56408 5.57518 5.72231 5.75449 5.83796 5.88314 5.97141 6.03755 6.07669 6.23870 6.31798 6.49168 6.55853 6.63611 6.73644 6.89874 6.97757 7.18073 7.33988 7.63671 7.79516 7.93136 8.01787 8.47179 9.20441 9.81515 10.40763 11.29485 Molecular weight = 338.20amu Principal moments of inertia in cm(-1) A = 0.017680 B = 0.002742 C = 0.002504 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1583.305309 B =10209.416308 C =11178.490687 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C 0.513 3.487 3 O -0.539 6.539 4 N -0.708 5.708 5 C 0.159 3.841 6 H 0.123 0.877 7 C 0.449 3.551 8 O -0.502 6.502 9 O -0.356 6.356 10 C 0.100 3.900 11 C -0.153 4.153 12 C 0.178 3.822 13 N -0.591 5.591 14 C -0.259 4.259 15 H 0.065 0.935 16 C 0.007 3.993 17 N -0.902 5.902 18 Si 0.906 3.094 19 H -0.281 1.281 20 H -0.290 1.290 21 H -0.282 1.282 22 C 0.149 3.851 23 C -0.127 4.127 24 C -0.094 4.094 25 C -0.129 4.129 26 C -0.123 4.123 27 C -0.125 4.125 28 C -0.118 4.118 29 H 0.076 0.924 30 H 0.095 0.905 31 H 0.098 0.902 32 H 0.406 0.594 33 H 0.077 0.923 34 H 0.064 0.936 35 H 0.052 0.948 36 H 0.089 0.911 37 H 0.022 0.978 38 H 0.256 0.744 39 H 0.020 0.980 40 H 0.064 0.936 41 H 0.058 0.942 42 H 0.070 0.930 43 H 0.100 0.900 44 H 0.072 0.928 45 H 0.072 0.928 46 H 0.070 0.930 47 H 0.068 0.932 48 H 0.067 0.933 49 H 0.065 0.935 50 H 0.072 0.928 51 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.963 -12.233 21.987 27.062 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.228 4.228 2 C 0.301 3.699 3 O -0.415 6.415 4 N -0.363 5.363 5 C 0.051 3.949 6 H 0.141 0.859 7 C 0.290 3.710 8 O -0.390 6.390 9 O -0.272 6.272 10 C 0.046 3.954 11 C -0.193 4.193 12 C 0.052 3.948 13 N -0.314 5.314 14 C -0.389 4.389 15 H 0.082 0.918 16 C -0.192 4.192 17 N -0.546 5.546 18 Si 0.735 3.265 19 H -0.208 1.208 20 H -0.216 1.216 21 H -0.209 1.209 22 C 0.022 3.978 23 C -0.167 4.167 24 C -0.113 4.113 25 C -0.167 4.167 26 C -0.161 4.161 27 C -0.162 4.162 28 C -0.156 4.156 29 H 0.095 0.905 30 H 0.114 0.886 31 H 0.117 0.883 32 H 0.243 0.757 33 H 0.095 0.905 34 H 0.083 0.917 35 H 0.071 0.929 36 H 0.107 0.893 37 H 0.040 0.960 38 H 0.066 0.934 39 H 0.038 0.962 40 H 0.082 0.918 41 H 0.076 0.924 42 H 0.089 0.911 43 H 0.118 0.882 44 H 0.090 0.910 45 H 0.091 0.909 46 H 0.088 0.912 47 H 0.087 0.913 48 H 0.086 0.914 49 H 0.084 0.916 50 H 0.090 0.910 51 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -9.816 -11.457 21.500 26.265 hybrid contribution 0.149 0.324 -0.686 0.773 sum -9.667 -11.133 20.815 25.507 Atomic orbital electron populations 1.21830 0.91098 1.04314 1.05537 1.20943 0.90909 0.83284 0.74810 1.90775 1.70625 1.31274 1.48814 1.45926 1.05612 1.09533 1.75272 1.20467 0.82038 1.02052 0.90303 0.85909 1.23948 0.81048 0.73571 0.92448 1.90633 1.52997 1.44662 1.50661 1.86521 1.31529 1.77040 1.32083 1.22919 0.96856 0.99694 0.75937 1.22665 1.00070 0.95205 1.01339 1.20705 0.84676 1.01569 0.87808 1.44047 1.07381 1.19474 1.60508 1.19109 0.92123 1.20725 1.06897 0.91757 1.25220 0.97135 1.00862 0.96019 1.69982 1.18089 1.41078 1.25442 0.86329 0.79745 0.81847 0.78550 1.20765 1.21577 1.20870 1.20892 0.98363 0.89607 0.88960 1.22229 0.92760 1.01105 1.00563 1.22067 1.01834 0.91970 0.95459 1.22553 1.01482 0.94669 0.97984 1.22511 1.01543 0.97347 0.94682 1.22378 0.99561 0.95554 0.98712 1.22196 1.00347 0.98688 0.94357 0.90520 0.88614 0.88344 0.75674 0.90530 0.91731 0.92901 0.89298 0.95992 0.93434 0.96199 0.91791 0.92352 0.91132 0.88195 0.90969 0.90906 0.91165 0.91314 0.91447 0.91644 0.90970 0.91066 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.23 10.39 36.00 0.37 -0.85 16 2 C 0.51 6.05 7.91 -10.99 -0.09 5.97 16 3 O -0.54 -8.98 16.72 5.56 0.09 -8.89 16 4 N -0.71 -7.12 3.85 -54.93 -0.21 -7.33 16 5 C 0.16 1.85 2.07 -69.08 -0.14 1.70 16 6 H 0.12 1.53 7.49 -51.93 -0.39 1.14 16 7 C 0.45 7.21 6.57 36.00 0.24 7.45 16 8 O -0.50 -9.26 15.77 -18.75 -0.30 -9.56 16 9 O -0.36 -6.25 9.88 -39.26 -0.39 -6.63 16 10 C 0.10 1.94 2.41 -26.67 -0.06 1.88 16 11 C -0.15 -3.35 5.73 -26.59 -0.15 -3.51 16 12 C 0.18 4.52 5.24 -3.71 -0.02 4.50 16 13 N -0.59 -15.28 2.98 -172.32 -0.51 -15.80 16 14 C -0.26 -7.22 9.55 -15.06 -0.14 -7.37 16 15 H 0.06 1.74 7.86 -52.49 -0.41 1.33 16 16 C 0.01 0.20 5.00 -17.43 -0.09 0.11 16 17 N -0.90 -26.74 11.26 55.49 0.62 -26.12 16 18 Si 0.91 21.99 29.57 -169.99 -5.03 16.96 16 19 H -0.28 -6.70 7.11 56.52 0.40 -6.30 16 20 H -0.29 -7.08 7.11 56.52 0.40 -6.68 16 21 H -0.28 -6.79 7.11 56.52 0.40 -6.39 16 22 C 0.15 3.18 6.52 -3.71 -0.02 3.15 16 23 C -0.13 -2.34 5.74 -26.61 -0.15 -2.49 16 24 C -0.09 -0.80 2.78 -89.50 -0.25 -1.05 16 25 C -0.13 -1.05 5.54 -25.03 -0.14 -1.19 16 26 C -0.12 -0.73 6.91 -24.70 -0.17 -0.90 16 27 C -0.12 -0.65 6.83 -25.07 -0.17 -0.83 16 28 C -0.12 -0.76 6.20 -25.61 -0.16 -0.92 16 29 H 0.08 0.35 7.92 -51.93 -0.41 -0.06 16 30 H 0.10 0.56 8.14 -51.93 -0.42 0.14 16 31 H 0.10 0.76 8.14 -51.93 -0.42 0.34 16 32 H 0.41 3.01 6.61 -40.82 -0.27 2.74 16 33 H 0.08 1.57 7.16 -51.93 -0.37 1.20 16 34 H 0.06 1.44 8.14 -51.93 -0.42 1.01 16 35 H 0.05 1.16 8.14 -51.92 -0.42 0.74 16 36 H 0.09 2.49 6.27 -51.93 -0.33 2.16 16 37 H 0.02 0.59 8.14 -51.93 -0.42 0.16 16 38 H 0.26 7.32 8.31 -40.82 -0.34 6.98 16 39 H 0.02 0.43 8.14 -51.93 -0.42 0.01 16 40 H 0.06 1.30 7.93 -51.93 -0.41 0.89 16 41 H 0.06 0.91 8.14 -51.92 -0.42 0.49 16 42 H 0.07 1.32 8.14 -51.93 -0.42 0.90 16 43 H 0.10 0.86 8.14 -51.93 -0.42 0.43 16 44 H 0.07 0.62 6.13 -51.93 -0.32 0.30 16 45 H 0.07 0.67 8.14 -51.93 -0.42 0.25 16 46 H 0.07 0.41 8.14 -51.92 -0.42 -0.01 16 47 H 0.07 0.37 8.14 -51.93 -0.42 -0.06 16 48 H 0.07 0.31 8.14 -51.93 -0.42 -0.11 16 49 H 0.06 0.30 8.14 -51.93 -0.42 -0.12 16 50 H 0.07 0.42 8.14 -51.93 -0.42 0.00 16 51 H 0.07 0.49 7.40 -51.93 -0.38 0.10 16 LS Contribution 401.94 15.07 6.06 6.06 Total: -1.00 -34.46 401.94 -9.58 -44.04 By element: Atomic # 1 Polarization: 10.37 SS G_CDS: -8.77 Total: 1.60 kcal Atomic # 6 Polarization: 6.82 SS G_CDS: -1.15 Total: 5.67 kcal Atomic # 7 Polarization: -49.15 SS G_CDS: -0.10 Total: -49.25 kcal Atomic # 8 Polarization: -24.49 SS G_CDS: -0.59 Total: -25.08 kcal Atomic # 14 Polarization: 21.99 SS G_CDS: -5.03 Total: 16.96 kcal Total LS contribution 6.06 Total: 6.06 kcal Total: -34.46 -9.58 -44.04 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000119348649.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -75.460 kcal (2) G-P(sol) polarization free energy of solvation -34.462 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.922 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.582 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.044 kcal (6) G-S(sol) free energy of system = (1) + (5) -119.504 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds