Wall clock time and date at job start Tue Mar 31 2020 22:36:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35925 * 116.99722 * 2 1 4 4 C 1.38727 * 120.05502 * 359.97438 * 3 2 1 5 5 C 1.38151 * 119.98392 * 179.97438 * 4 3 2 6 6 C 1.38258 * 120.08786 * 359.97286 * 5 4 3 7 7 S 1.76200 * 119.94824 * 180.02562 * 6 5 4 8 8 O 1.42103 * 106.40324 * 228.54261 * 7 6 5 9 9 O 1.42100 * 106.40079 * 1.46172 * 7 6 5 10 10 N 1.65593 * 107.21909 * 115.00381 * 7 6 5 11 11 C 1.46501 * 120.00644 * 65.00020 * 10 7 6 12 12 C 1.50693 * 109.47660 * 164.99745 * 11 10 7 13 13 H 1.08004 * 120.00117 * 0.02562 * 12 11 10 14 14 C 1.37877 * 120.00351 * 179.97438 * 12 11 10 15 15 N 1.31520 * 119.99720 * 0.02562 * 14 12 11 16 16 Si 1.86798 * 120.00329 * 180.02562 * 14 12 11 17 17 H 1.48501 * 109.47170 * 359.97438 * 16 14 12 18 18 H 1.48493 * 109.47540 * 120.00093 * 16 14 12 19 19 H 1.48497 * 109.47076 * 240.00360 * 16 14 12 20 20 C 1.38369 * 120.10612 * 0.02562 * 6 5 4 21 21 Cl 1.73600 * 119.98964 * 179.97438 * 20 6 5 22 22 C 1.38366 * 120.01428 * 359.78359 * 20 6 5 23 23 Cl 1.73598 * 120.04032 * 180.25587 * 22 20 6 24 24 H 1.09002 * 109.47382 * 60.00054 * 1 2 3 25 25 H 1.09001 * 109.46938 * 300.00041 * 1 2 3 26 26 H 1.09004 * 109.46926 * 180.02562 * 1 2 3 27 27 H 1.08000 * 120.00399 * 359.97438 * 4 3 2 28 28 H 1.08003 * 119.95634 * 180.02562 * 5 4 3 29 29 H 0.97001 * 119.99835 * 244.99857 * 10 7 6 30 30 H 1.09002 * 109.46953 * 285.00514 * 11 10 7 31 31 H 1.09002 * 109.46665 * 44.99933 * 11 10 7 32 32 H 0.96996 * 120.00244 * 179.97438 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2111 0.0000 4 6 1.2916 2.3753 -0.0005 5 6 1.9202 3.6055 0.0000 6 6 3.3009 3.6783 0.0016 7 16 4.0989 5.2492 0.0030 8 8 5.0864 5.1986 -1.0175 9 8 3.0655 6.2241 0.0368 10 7 4.9152 5.3831 1.4375 11 6 6.0338 4.4836 1.7306 12 6 6.8263 5.0288 2.8905 13 1 6.5266 5.9528 3.3626 14 6 7.9335 4.3475 3.3499 15 7 8.2982 3.2220 2.7755 16 14 8.9156 5.0230 4.7882 17 1 8.3029 6.2935 5.2528 18 1 8.9111 4.0361 5.8977 19 1 10.3137 5.2769 4.3572 20 6 4.0570 2.5195 0.0022 21 17 5.7904 2.6145 0.0036 22 6 3.4319 1.2851 0.0057 23 17 4.3799 -0.1691 0.0131 24 1 -0.3634 0.5138 -0.8900 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 0.2130 2.3198 -0.0014 28 1 1.3324 4.5115 0.0000 29 1 4.6529 6.0572 2.0837 30 1 5.6487 3.4962 1.9856 31 1 6.6777 4.4072 0.8545 32 1 9.0773 2.7429 3.0984 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000487410080.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 22:36:30 Heat of formation + Delta-G solvation = -80.364328 kcal Electronic energy + Delta-G solvation = -23107.844354 eV Core-core repulsion = 19248.686861 eV Total energy + Delta-G solvation = -3859.157493 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 338.993 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -40.51632 -38.03523 -36.88054 -36.43260 -36.17040 -35.36621 -34.61932 -32.14314 -31.07220 -30.53789 -27.76109 -26.75059 -23.38244 -22.88142 -22.58690 -19.25449 -18.74359 -17.84118 -17.20350 -16.85860 -16.24913 -15.91333 -15.48372 -15.43002 -14.77572 -14.55595 -14.46262 -13.90286 -13.56731 -13.46949 -12.80218 -12.69059 -12.42494 -11.88111 -11.82144 -11.72081 -11.62099 -11.57199 -11.52040 -11.24441 -10.96435 -10.88985 -10.76067 -10.62883 -10.47620 -10.03111 -9.16864 -8.99794 -8.71124 -8.58514 -8.15473 -6.14227 -4.18722 0.53932 0.79995 0.92361 1.87800 2.19632 2.86851 3.01156 3.26223 3.34153 3.37230 3.65545 4.09371 4.36041 4.40030 4.47836 4.77631 4.78661 4.86351 5.00092 5.10691 5.22056 5.24157 5.33761 5.67682 5.76757 6.07635 6.43400 6.79730 7.29550 7.34195 7.79158 7.82124 8.19583 8.84226 9.45499 10.95138 Molecular weight = 338.99amu Principal moments of inertia in cm(-1) A = 0.013547 B = 0.004988 C = 0.004143 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2066.401276 B = 5612.174347 C = 6757.533321 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.298 6.298 3 C 0.194 3.806 4 C -0.224 4.224 5 C 0.031 3.969 6 C -0.698 4.698 7 S 2.691 3.309 8 O -0.946 6.946 9 O -0.977 6.977 10 N -1.098 6.098 11 C 0.235 3.765 12 C -0.531 4.531 13 H 0.066 0.934 14 C 0.064 3.936 15 N -0.885 5.885 16 Si 0.901 3.099 17 H -0.272 1.272 18 H -0.283 1.283 19 H -0.283 1.283 20 C 0.085 3.915 21 Cl 0.037 6.963 22 C -0.091 4.091 23 Cl -0.029 7.029 24 H 0.061 0.939 25 H 0.062 0.938 26 H 0.106 0.894 27 H 0.148 0.852 28 H 0.158 0.842 29 H 0.412 0.588 30 H 0.033 0.967 31 H 0.045 0.955 32 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.772 -5.829 -5.485 17.686 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.210 6.210 3 C 0.145 3.855 4 C -0.244 4.244 5 C 0.012 3.988 6 C -0.782 4.782 7 S 2.776 3.224 8 O -0.936 6.936 9 O -0.967 6.967 10 N -0.861 5.861 11 C 0.113 3.887 12 C -0.571 4.571 13 H 0.084 0.916 14 C -0.140 4.140 15 N -0.523 5.523 16 Si 0.728 3.272 17 H -0.197 1.197 18 H -0.209 1.209 19 H -0.209 1.209 20 C 0.055 3.945 21 Cl 0.068 6.932 22 C -0.120 4.120 23 Cl 0.000 7.000 24 H 0.080 0.920 25 H 0.081 0.919 26 H 0.125 0.875 27 H 0.166 0.834 28 H 0.176 0.824 29 H 0.247 0.753 30 H 0.050 0.950 31 H 0.062 0.938 32 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -15.295 -5.898 -6.290 17.558 hybrid contribution 0.183 -0.318 1.418 1.465 sum -15.112 -6.216 -4.871 17.051 Atomic orbital electron populations 1.23231 0.77375 1.04699 1.01948 1.86198 1.22135 1.25524 1.87105 1.18700 0.90037 0.85403 0.91319 1.21320 1.00685 0.91405 1.11018 1.20791 0.91658 0.98660 0.87697 1.31164 1.04778 1.21290 1.20954 1.02023 0.73261 0.72782 0.74356 1.93614 1.58086 1.85999 1.55921 1.93516 1.58785 1.57136 1.87298 1.55436 1.45700 1.47503 1.37476 1.19864 0.82843 0.88328 0.97693 1.21281 1.11529 1.08899 1.15377 0.91634 1.24931 0.97057 0.94839 0.97145 1.69935 1.26099 1.15294 1.40945 0.86407 0.79885 0.78979 0.81925 1.19662 1.20925 1.20863 1.20525 0.89776 0.91371 0.92807 1.98624 1.02808 1.97457 1.94351 1.19949 0.89296 0.88662 1.14128 1.98390 1.70925 1.33770 1.96942 0.92012 0.91940 0.87548 0.83415 0.82430 0.75287 0.94951 0.93755 0.92557 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.14 9.81 101.05 0.99 1.13 16 2 O -0.30 -3.44 9.96 -19.51 -0.19 -3.63 16 3 C 0.19 2.62 6.68 -39.20 -0.26 2.36 16 4 C -0.22 -2.58 9.04 -39.43 -0.36 -2.94 16 5 C 0.03 0.42 9.54 -39.61 -0.38 0.04 16 6 C -0.70 -11.79 5.89 -39.53 -0.23 -12.02 16 7 S 2.69 50.43 5.44 -107.50 -0.58 49.84 16 8 O -0.95 -20.30 15.96 -57.17 -0.91 -21.22 16 9 O -0.98 -18.13 16.96 -57.17 -0.97 -19.10 16 10 N -1.10 -22.21 5.99 -11.66 -0.07 -22.28 16 11 C 0.24 5.73 3.86 -5.20 -0.02 5.71 16 12 C -0.53 -14.04 9.27 -34.44 -0.32 -14.36 16 13 H 0.07 1.66 7.65 -52.48 -0.40 1.26 16 14 C 0.06 1.72 5.46 -17.82 -0.10 1.62 16 15 N -0.88 -24.63 13.29 55.43 0.74 -23.89 16 16 Si 0.90 20.67 29.54 -169.99 -5.02 15.65 16 17 H -0.27 -6.12 7.11 56.52 0.40 -5.72 16 18 H -0.28 -6.46 7.11 56.52 0.40 -6.06 16 19 H -0.28 -6.49 7.11 56.52 0.40 -6.09 16 20 C 0.08 1.54 6.09 -39.49 -0.24 1.30 16 21 Cl 0.04 0.78 19.60 -51.86 -1.02 -0.24 16 22 C -0.09 -1.50 6.34 -39.33 -0.25 -1.75 16 23 Cl -0.03 -0.47 27.51 -51.86 -1.43 -1.90 16 24 H 0.06 0.31 7.66 -51.93 -0.40 -0.08 16 25 H 0.06 0.34 7.66 -51.93 -0.40 -0.06 16 26 H 0.11 0.47 8.14 -51.93 -0.42 0.05 16 27 H 0.15 1.10 6.30 -52.49 -0.33 0.77 16 28 H 0.16 1.74 7.33 -52.48 -0.38 1.36 16 29 H 0.41 7.48 8.54 -34.46 -0.29 7.19 16 30 H 0.03 0.81 6.14 -51.93 -0.32 0.49 16 31 H 0.04 1.16 5.88 -51.93 -0.31 0.86 16 32 H 0.26 6.99 8.31 -40.82 -0.34 6.65 16 LS Contribution 311.15 15.07 4.69 4.69 Total: -1.00 -32.04 311.15 -8.32 -40.37 By element: Atomic # 1 Polarization: 3.00 SS G_CDS: -2.39 Total: 0.61 kcal Atomic # 6 Polarization: -17.74 SS G_CDS: -1.16 Total: -18.90 kcal Atomic # 7 Polarization: -46.84 SS G_CDS: 0.67 Total: -46.18 kcal Atomic # 8 Polarization: -41.87 SS G_CDS: -2.08 Total: -43.95 kcal Atomic # 14 Polarization: 20.67 SS G_CDS: -5.02 Total: 15.65 kcal Atomic # 16 Polarization: 50.43 SS G_CDS: -0.58 Total: 49.84 kcal Atomic # 17 Polarization: 0.31 SS G_CDS: -2.44 Total: -2.13 kcal Total LS contribution 4.69 Total: 4.69 kcal Total: -32.04 -8.32 -40.37 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000487410080.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.999 kcal (2) G-P(sol) polarization free energy of solvation -32.044 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.043 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.322 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.366 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.364 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds