Wall clock time and date at job start Tue Mar 31 2020 22:44:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.36063 * 117.00000 * 2 1 4 4 C 1.38740 * 120.86618 * 89.99691 * 3 2 1 5 5 Cl 1.73603 * 120.44055 * 0.04902 * 4 3 2 6 6 N 1.32642 * 119.12007 * 180.02562 * 4 3 2 7 7 C 1.31880 * 121.00098 * 0.02562 * 6 4 3 8 8 Cl 1.73600 * 119.03989 * 179.97438 * 7 6 4 9 9 N 1.31895 * 121.91713 * 0.27447 * 7 6 4 10 10 C 1.32933 * 120.76520 * 359.44458 * 9 7 6 11 11 N 1.38961 * 120.53223 * 180.27826 * 10 9 7 12 12 C 1.38398 * 120.00237 * 355.88772 * 11 10 9 13 13 C 1.38963 * 119.99223 * 58.06932 * 12 11 10 14 14 H 1.07998 * 119.99652 * 203.78457 * 13 12 11 15 15 C 1.40847 * 120.00390 * 23.79070 * 13 12 11 16 16 N 1.30329 * 120.00146 * 7.07550 * 15 13 12 17 17 Si 1.86807 * 119.99988 * 187.07974 * 15 13 12 18 18 H 1.48505 * 109.47104 * 59.99889 * 17 15 13 19 19 H 1.48502 * 109.47086 * 179.97438 * 17 15 13 20 20 H 1.48499 * 109.46979 * 299.99793 * 17 15 13 21 21 C 1.41138 * 120.00276 * 238.06665 * 12 11 10 22 22 C 1.43203 * 119.99857 * 185.42691 * 21 12 11 23 23 N 7.53513 * 92.39278 * 295.75231 * 2 1 3 24 24 C 1.43200 * 119.99980 * 5.42678 * 21 12 11 25 25 N 4.90325 * 58.24865 * 292.20057 * 2 1 3 26 26 H 1.09006 * 109.46740 * 59.99725 * 1 2 3 27 27 H 1.09001 * 109.47199 * 179.97438 * 1 2 3 28 28 H 1.09002 * 109.47358 * 300.00416 * 1 2 3 29 29 H 0.96998 * 119.99956 * 175.90272 * 11 10 9 30 30 H 0.96996 * 120.00074 * 185.00142 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0467 1.2123 0.0000 4 6 2.3698 1.8466 1.1909 5 17 1.9924 1.1034 2.7138 6 7 2.9712 3.0281 1.1505 7 6 3.2630 3.6028 -0.0001 8 17 4.0499 5.1502 0.0064 9 7 2.9690 3.0388 -1.1556 10 6 2.3711 1.8524 -1.2006 11 7 2.0688 1.2600 -2.4207 12 6 2.3124 1.9417 -3.6002 13 6 3.5980 2.3774 -3.8980 14 1 3.7440 3.2056 -4.5756 15 6 4.7105 1.7389 -3.3162 16 7 4.5447 0.6562 -2.6099 17 14 6.4236 2.4439 -3.5570 18 1 6.4732 3.8226 -3.0074 19 1 7.4131 1.5931 -2.8484 20 1 6.7461 2.4768 -5.0062 21 6 1.2553 2.1944 -4.5006 22 6 1.5258 2.7956 -5.7718 23 7 1.7436 3.2710 -6.7808 24 6 -0.0877 1.8496 -4.1428 25 7 -1.1513 1.5754 -3.8603 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3634 -1.0277 -0.0005 28 1 -0.3634 0.5139 0.8899 29 1 1.6869 0.3687 -2.4457 30 1 5.2995 0.2573 -2.1494 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001169080183.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 22:44:48 Heat of formation + Delta-G solvation = 66.945783 kcal Electronic energy + Delta-G solvation = -24269.351132 eV Core-core repulsion = 20345.723035 eV Total energy + Delta-G solvation = -3923.628096 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 339.003 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -41.13128 -38.18813 -37.85447 -36.83321 -36.57399 -35.47762 -34.84321 -34.01669 -32.73493 -31.17178 -29.46345 -27.25725 -26.90644 -24.25089 -23.59464 -21.61487 -19.45245 -18.79057 -17.88105 -17.67436 -17.05305 -16.44212 -16.02215 -15.76484 -15.16102 -14.67489 -14.63092 -14.00641 -13.81687 -12.95975 -12.72841 -12.60298 -12.41920 -12.31246 -12.13421 -11.85188 -11.73569 -11.66905 -11.61461 -11.54591 -11.31279 -11.12016 -11.02850 -10.98565 -10.89283 -10.57497 -10.52662 -10.13529 -9.42663 -8.98670 -8.57060 -8.02425 -7.35096 -5.52900 0.69663 1.16419 1.26394 1.87057 2.10945 2.67732 2.71887 2.84252 3.29339 3.37405 3.42887 3.74714 3.85728 3.95390 4.15085 4.20068 4.55146 4.59575 5.05720 5.09069 5.34013 5.41616 5.44875 5.57216 5.73626 6.11639 6.22319 6.55322 6.85518 7.01609 7.30739 7.42927 7.60076 7.76443 7.98625 8.29525 8.81995 9.04439 9.09692 Molecular weight = 339.00amu Principal moments of inertia in cm(-1) A = 0.009452 B = 0.006214 C = 0.004743 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2961.473873 B = 4504.593394 C = 5902.225634 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.304 6.304 3 C -0.054 4.054 4 C 0.241 3.759 5 Cl -0.008 7.008 6 N -0.547 5.547 7 C 0.416 3.584 8 Cl 0.029 6.971 9 N -0.519 5.519 10 C 0.491 3.509 11 N -0.602 5.602 12 C 0.365 3.635 13 C -0.334 4.334 14 H 0.114 0.886 15 C 0.078 3.922 16 N -0.731 5.731 17 Si 0.919 3.081 18 H -0.244 1.244 19 H -0.269 1.269 20 H -0.250 1.250 21 C -0.307 4.307 22 C 0.326 3.674 23 N -0.528 5.528 24 C 0.307 3.693 25 N -0.532 5.532 26 H 0.051 0.949 27 H 0.100 0.900 28 H 0.047 0.953 29 H 0.419 0.581 30 H 0.304 0.696 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.359 -1.325 10.917 11.498 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 O -0.218 6.218 3 C -0.111 4.111 4 C 0.072 3.928 5 Cl 0.020 6.980 6 N -0.274 5.274 7 C 0.121 3.879 8 Cl 0.056 6.944 9 N -0.247 5.247 10 C 0.244 3.756 11 N -0.224 5.224 12 C 0.262 3.738 13 C -0.361 4.361 14 H 0.132 0.868 15 C -0.153 4.153 16 N -0.350 5.350 17 Si 0.740 3.260 18 H -0.168 1.168 19 H -0.193 1.193 20 H -0.174 1.174 21 C -0.325 4.325 22 C 0.017 3.983 23 N -0.210 5.210 24 C 0.000 4.000 25 N -0.215 5.215 26 H 0.070 0.930 27 H 0.118 0.882 28 H 0.066 0.934 29 H 0.259 0.741 30 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 2.691 -0.504 9.854 10.227 hybrid contribution 0.506 -0.790 0.556 1.090 sum 3.197 -1.294 10.410 10.966 Atomic orbital electron populations 1.23179 0.79145 1.03691 1.01144 1.86214 1.19778 1.22051 1.93717 1.19059 1.09380 0.92125 0.90513 1.21843 0.94143 0.89362 0.87430 1.98408 1.91598 1.79211 1.28738 1.67106 1.19957 1.10388 1.29967 1.22299 0.92268 0.89967 0.83399 1.98426 1.76530 1.21120 1.98275 1.67568 1.18174 1.10945 1.27997 1.18244 0.85685 0.86069 0.85607 1.41473 1.61585 1.18414 1.00972 1.16702 0.90888 0.84828 0.81351 1.20166 0.89116 1.10252 1.16576 0.86800 1.26516 1.04002 0.92881 0.91925 1.69425 1.36978 1.12235 1.16344 0.86053 0.77566 0.81261 0.81129 1.16777 1.19300 1.17375 1.12752 0.85303 1.39182 0.95300 1.24585 0.92164 0.90505 0.91002 1.81091 1.08795 1.17989 1.13150 1.25169 0.91815 0.90854 0.92182 1.80990 1.11571 1.18222 1.10688 0.93033 0.88210 0.93434 0.74064 0.88342 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.29 11.13 101.05 1.13 1.41 16 2 O -0.30 -4.56 9.34 -19.94 -0.19 -4.75 16 3 C -0.05 -0.89 5.80 -38.79 -0.22 -1.12 16 4 C 0.24 3.88 7.34 -17.02 -0.12 3.75 16 5 Cl -0.01 -0.11 28.76 -51.86 -1.49 -1.60 16 6 N -0.55 -9.20 10.39 -8.74 -0.09 -9.29 16 7 C 0.42 7.18 8.18 -91.99 -0.75 6.43 16 8 Cl 0.03 0.43 29.26 -51.86 -1.52 -1.09 16 9 N -0.52 -9.64 8.44 -10.72 -0.09 -9.73 16 10 C 0.49 8.87 6.04 -154.33 -0.93 7.93 16 11 N -0.60 -11.00 3.34 -9.48 -0.03 -11.03 16 12 C 0.36 7.24 5.58 -83.53 -0.47 6.77 16 13 C -0.33 -6.62 7.50 -38.33 -0.29 -6.91 16 14 H 0.11 2.30 7.19 -52.49 -0.38 1.92 16 15 C 0.08 1.44 4.71 -17.20 -0.08 1.36 16 16 N -0.73 -13.50 11.02 55.60 0.61 -12.89 16 17 Si 0.92 14.85 29.58 -169.99 -5.03 9.82 16 18 H -0.24 -3.99 7.11 56.52 0.40 -3.59 16 19 H -0.27 -4.24 7.11 56.52 0.40 -3.83 16 20 H -0.25 -4.08 7.11 56.52 0.40 -3.68 16 21 C -0.31 -6.40 5.88 -104.95 -0.62 -7.02 16 22 C 0.33 7.19 14.00 -22.46 -0.31 6.88 16 23 N -0.53 -12.19 18.54 41.85 0.78 -11.42 16 24 C 0.31 6.50 14.82 -22.54 -0.33 6.17 16 25 N -0.53 -11.60 18.52 41.76 0.77 -10.83 16 26 H 0.05 0.72 8.14 -51.93 -0.42 0.29 16 27 H 0.10 1.00 8.14 -51.93 -0.42 0.58 16 28 H 0.05 0.55 8.14 -51.93 -0.42 0.13 16 29 H 0.42 7.29 8.27 -40.82 -0.34 6.95 16 30 H 0.30 5.26 8.29 -40.82 -0.34 4.92 16 LS Contribution 327.69 15.07 4.94 4.94 Total: -1.00 -23.05 327.69 -5.46 -28.52 By element: Atomic # 1 Polarization: 4.80 SS G_CDS: -1.12 Total: 3.69 kcal Atomic # 6 Polarization: 28.68 SS G_CDS: -3.01 Total: 25.67 kcal Atomic # 7 Polarization: -67.14 SS G_CDS: 1.95 Total: -65.20 kcal Atomic # 8 Polarization: -4.56 SS G_CDS: -0.19 Total: -4.75 kcal Atomic # 14 Polarization: 14.85 SS G_CDS: -5.03 Total: 9.82 kcal Atomic # 17 Polarization: 0.32 SS G_CDS: -3.01 Total: -2.69 kcal Total LS contribution 4.94 Total: 4.94 kcal Total: -23.05 -5.46 -28.52 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001169080183.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 95.464 kcal (2) G-P(sol) polarization free energy of solvation -23.055 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 72.409 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.463 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.518 kcal (6) G-S(sol) free energy of system = (1) + (5) 66.946 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds