Wall clock time and date at job start Tue Mar 31 2020 22:08:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46494 * 1 3 3 C 1.46510 * 120.00023 * 2 1 4 4 C 1.53005 * 109.46838 * 275.42601 * 3 2 1 5 5 F 1.39897 * 109.47249 * 299.99750 * 4 3 2 6 6 F 1.39899 * 109.46996 * 59.99986 * 4 3 2 7 7 S 1.65593 * 120.00270 * 179.97438 * 2 1 3 8 8 O 1.42098 * 106.40747 * 149.00982 * 7 2 1 9 9 O 1.42103 * 106.40229 * 16.08480 * 7 2 1 10 10 C 1.76204 * 107.21955 * 262.54682 * 7 2 1 11 11 C 1.38638 * 119.75897 * 247.82210 * 10 7 2 12 12 C 1.37600 * 120.25784 * 180.29157 * 11 10 7 13 13 C 1.40742 * 119.77768 * 359.73322 * 12 11 10 14 14 C 1.41393 * 120.23618 * 180.02562 * 13 12 11 15 15 H 1.08001 * 119.99513 * 149.65496 * 14 13 12 16 16 C 1.39940 * 120.00235 * 329.64901 * 14 13 12 17 17 N 1.30826 * 119.99974 * 165.79719 * 16 14 13 18 18 Si 1.86802 * 120.00088 * 345.79599 * 16 14 13 19 19 H 1.48496 * 109.47080 * 88.98501 * 18 16 14 20 20 H 1.48500 * 109.47244 * 208.98593 * 18 16 14 21 21 H 1.48496 * 109.46971 * 328.98344 * 18 16 14 22 22 C 1.40674 * 119.52282 * 359.97438 * 13 12 11 23 23 C 1.37760 * 119.73108 * 0.02562 * 22 13 12 24 24 Cl 1.73602 * 119.88895 * 179.97438 * 23 22 13 25 25 H 1.08994 * 109.47490 * 270.00296 * 1 2 3 26 26 H 1.09006 * 109.47090 * 30.00814 * 1 2 3 27 27 H 1.09001 * 109.46826 * 150.00032 * 1 2 3 28 28 H 1.08998 * 109.46989 * 35.42254 * 3 2 1 29 29 H 1.08997 * 109.47339 * 155.42696 * 3 2 1 30 30 H 1.09004 * 109.46816 * 179.97438 * 4 3 2 31 31 H 1.07993 * 119.86678 * 0.02562 * 11 10 7 32 32 H 1.08003 * 120.10848 * 179.70017 * 12 11 10 33 33 H 0.97000 * 120.00165 * 179.97438 * 17 16 14 34 34 H 1.07995 * 120.13812 * 180.02562 * 22 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1975 1.2688 0.0000 4 6 2.3343 1.7786 -1.4361 5 9 3.0320 0.8374 -2.2006 6 9 1.0623 1.9745 -1.9846 7 16 2.2930 -1.4340 0.0006 8 8 3.5056 -1.1976 -0.7013 9 8 1.3593 -2.4367 -0.3766 10 6 2.7429 -1.7759 1.6696 11 6 4.0775 -1.7414 2.0434 12 6 4.4409 -2.0125 3.3426 13 6 3.4517 -2.3203 4.2954 14 6 3.8142 -2.5999 5.6331 15 1 3.1354 -2.3593 6.4380 16 6 5.0523 -3.1884 5.9142 17 7 5.5101 -3.1955 7.1398 18 14 6.0514 -3.9641 4.5396 19 1 6.9336 -2.9375 3.9288 20 1 6.8814 -5.0650 5.0913 21 1 5.1336 -4.5064 3.5059 22 6 2.0998 -2.3466 3.9073 23 6 1.7584 -2.0720 2.6013 24 17 0.0914 -2.1040 2.1178 25 1 -0.3634 0.0001 1.0276 26 1 -0.3633 0.8900 -0.5140 27 1 -0.3633 -0.8900 -0.5138 28 1 1.6539 2.0022 0.5956 29 1 3.1885 1.1162 0.4273 30 1 2.8790 2.7229 -1.4361 31 1 4.8351 -1.5051 1.3111 32 1 5.4817 -1.9897 3.6300 33 1 6.3681 -3.6038 7.3347 34 1 1.3327 -2.5811 4.6303 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000451166210.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 22:08:41 Heat of formation + Delta-G solvation = -160.704920 kcal Electronic energy + Delta-G solvation = -25860.595586 eV Core-core repulsion = 21581.990677 eV Total energy + Delta-G solvation = -4278.604908 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 339.029 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -48.82597 -46.82457 -38.20024 -36.73270 -36.28353 -35.87829 -35.22651 -34.10180 -31.05371 -29.95274 -29.91597 -26.06858 -25.70939 -22.80259 -22.11335 -21.43729 -18.79757 -18.02554 -17.82865 -17.57113 -17.22757 -16.57863 -16.29918 -15.78192 -15.39694 -14.73734 -14.56710 -13.93198 -13.87214 -13.79410 -13.35290 -13.18959 -13.10430 -13.03700 -12.77183 -12.67884 -12.46122 -12.30065 -11.87013 -11.55818 -11.49002 -11.36037 -11.27717 -11.06862 -11.02256 -10.98754 -10.59781 -10.42827 -10.09269 -9.80035 -9.54936 -8.92662 -8.38322 -7.99232 -7.48895 -5.12702 0.95182 1.74474 2.23516 2.66816 2.81710 2.95653 3.02528 3.28825 3.61216 3.82079 3.91260 4.22464 4.33707 4.43987 4.64689 4.86333 4.96041 5.11524 5.35638 5.44633 5.64654 5.70264 5.97201 5.99515 6.02934 6.22029 6.26034 6.55384 6.62890 6.77726 6.88941 6.98376 7.33925 7.50080 7.77673 8.06389 8.19810 9.48949 Molecular weight = 339.03amu Principal moments of inertia in cm(-1) A = 0.018687 B = 0.004375 C = 0.003972 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1497.990159 B = 6397.867039 C = 7048.485929 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.082 3.918 2 N -0.999 5.999 3 C 0.080 3.920 4 C 0.239 3.761 5 F -0.189 7.189 6 F -0.207 7.207 7 S 2.691 3.309 8 O -0.965 6.965 9 O -0.960 6.960 10 C -0.799 4.799 11 C 0.023 3.977 12 C -0.257 4.257 13 C 0.119 3.881 14 C -0.400 4.400 15 H 0.103 0.897 16 C 0.079 3.921 17 N -0.772 5.772 18 Si 0.918 3.082 19 H -0.260 1.260 20 H -0.284 1.284 21 H -0.240 1.240 22 C -0.206 4.206 23 C 0.093 3.907 24 Cl -0.091 7.091 25 H 0.059 0.941 26 H 0.073 0.927 27 H 0.082 0.918 28 H 0.107 0.893 29 H 0.111 0.889 30 H 0.115 0.885 31 H 0.123 0.877 32 H 0.115 0.885 33 H 0.297 0.703 34 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.004 8.605 -8.209 12.549 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 N -0.834 5.834 3 C -0.048 4.048 4 C 0.183 3.817 5 F -0.171 7.171 6 F -0.189 7.189 7 S 2.787 3.213 8 O -0.955 6.955 9 O -0.950 6.950 10 C -0.893 4.893 11 C 0.003 3.997 12 C -0.277 4.277 13 C 0.114 3.886 14 C -0.426 4.426 15 H 0.121 0.879 16 C -0.146 4.146 17 N -0.392 5.392 18 Si 0.743 3.257 19 H -0.186 1.186 20 H -0.211 1.211 21 H -0.163 1.163 22 C -0.226 4.226 23 C 0.065 3.935 24 Cl -0.063 7.063 25 H 0.078 0.922 26 H 0.092 0.908 27 H 0.101 0.899 28 H 0.126 0.874 29 H 0.129 0.871 30 H 0.132 0.868 31 H 0.141 0.859 32 H 0.133 0.867 33 H 0.108 0.892 34 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges -3.873 8.031 -8.768 12.505 hybrid contribution 0.358 -0.181 0.439 0.594 sum -3.515 7.850 -8.329 11.973 Atomic orbital electron populations 1.21777 0.78161 1.03866 1.02454 1.57563 1.15438 1.20412 1.89994 1.22330 0.99951 0.88337 0.94168 1.22567 0.77400 0.92379 0.89326 1.93092 1.78542 1.67733 1.77685 1.92941 1.42561 1.95735 1.87632 1.01667 0.72797 0.72266 0.74559 1.93530 1.45558 1.84884 1.71546 1.93540 1.63362 1.55406 1.82729 1.29291 1.00041 1.36953 1.22965 1.20245 0.92526 0.91275 0.95702 1.21253 0.99064 1.13069 0.94319 1.17775 0.90922 0.87082 0.92827 1.19887 1.00509 1.29609 0.92580 0.87917 1.26404 0.96859 0.93964 0.97368 1.69625 1.18452 1.29825 1.21318 0.86223 0.79880 0.78863 0.80746 1.18558 1.21055 1.16272 1.20954 0.96731 1.11513 0.93450 1.20033 0.82004 0.97281 0.94172 1.98334 1.19595 1.96646 1.91682 0.92202 0.90841 0.89934 0.87441 0.87103 0.86796 0.85936 0.86730 0.89207 0.86304 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.08 8.87 59.84 0.53 1.61 16 2 N -1.00 -14.81 3.08 -121.75 -0.38 -15.18 16 3 C 0.08 0.90 5.69 -4.03 -0.02 0.88 16 4 C 0.24 2.63 5.60 37.16 0.21 2.83 16 5 F -0.19 -2.89 15.35 2.25 0.03 -2.86 16 6 F -0.21 -2.49 15.75 2.25 0.04 -2.46 16 7 S 2.69 50.94 5.04 -107.50 -0.54 50.40 16 8 O -0.96 -19.38 14.32 -57.17 -0.82 -20.20 16 9 O -0.96 -20.15 14.76 -57.17 -0.84 -20.99 16 10 C -0.80 -16.36 5.94 -39.25 -0.23 -16.59 16 11 C 0.02 0.47 9.52 -39.67 -0.38 0.09 16 12 C -0.26 -5.64 7.18 -38.87 -0.28 -5.92 16 13 C 0.12 2.71 5.13 -106.83 -0.55 2.16 16 14 C -0.40 -9.46 9.60 -37.75 -0.36 -9.82 16 15 H 0.10 2.49 8.06 -52.49 -0.42 2.07 16 16 C 0.08 1.80 5.45 -17.34 -0.09 1.71 16 17 N -0.77 -17.86 13.93 55.55 0.77 -17.09 16 18 Si 0.92 18.66 24.46 -169.99 -4.16 14.51 16 19 H -0.26 -5.05 6.44 56.52 0.36 -4.69 16 20 H -0.28 -5.51 7.11 56.52 0.40 -5.11 16 21 H -0.24 -5.14 6.94 56.52 0.39 -4.75 16 22 C -0.21 -4.44 9.57 -38.84 -0.37 -4.82 16 23 C 0.09 1.93 6.29 -39.57 -0.25 1.68 16 24 Cl -0.09 -1.65 23.18 -51.86 -1.20 -2.85 16 25 H 0.06 0.75 6.39 -51.93 -0.33 0.42 16 26 H 0.07 0.80 6.77 -51.93 -0.35 0.45 16 27 H 0.08 1.17 7.00 -51.93 -0.36 0.81 16 28 H 0.11 0.86 8.11 -51.93 -0.42 0.44 16 29 H 0.11 1.20 7.80 -51.93 -0.40 0.79 16 30 H 0.11 0.74 8.14 -51.93 -0.42 0.32 16 31 H 0.12 2.29 7.31 -52.49 -0.38 1.91 16 32 H 0.12 2.42 4.32 -52.48 -0.23 2.20 16 33 H 0.30 6.14 8.30 -40.82 -0.34 5.81 16 34 H 0.12 2.40 8.06 -52.49 -0.42 1.98 16 LS Contribution 309.46 15.07 4.66 4.66 Total: -1.00 -28.42 309.46 -7.16 -35.59 By element: Atomic # 1 Polarization: 5.58 SS G_CDS: -2.93 Total: 2.65 kcal Atomic # 6 Polarization: -24.38 SS G_CDS: -1.80 Total: -26.18 kcal Atomic # 7 Polarization: -32.67 SS G_CDS: 0.40 Total: -32.27 kcal Atomic # 8 Polarization: -39.53 SS G_CDS: -1.66 Total: -41.19 kcal Atomic # 9 Polarization: -5.38 SS G_CDS: 0.07 Total: -5.31 kcal Atomic # 14 Polarization: 18.66 SS G_CDS: -4.16 Total: 14.51 kcal Atomic # 16 Polarization: 50.94 SS G_CDS: -0.54 Total: 50.40 kcal Atomic # 17 Polarization: -1.65 SS G_CDS: -1.20 Total: -2.85 kcal Total LS contribution 4.66 Total: 4.66 kcal Total: -28.42 -7.16 -35.59 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000451166210.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -125.118 kcal (2) G-P(sol) polarization free energy of solvation -28.422 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -153.540 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.165 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.587 kcal (6) G-S(sol) free energy of system = (1) + (5) -160.705 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds