Wall clock time and date at job start Tue Mar 31 2020 22:45:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46904 * 1 3 3 C 1.46895 * 111.00287 * 2 1 4 4 C 1.46900 * 111.00167 * 123.96156 * 2 1 3 5 5 C 1.52997 * 109.47142 * 66.03728 * 4 2 1 6 6 N 1.46503 * 109.46971 * 179.97438 * 5 4 2 7 7 C 1.46501 * 119.99699 * 90.00551 * 6 5 4 8 8 C 1.50702 * 109.47074 * 270.00204 * 7 6 5 9 9 C 1.38270 * 119.99101 * 270.27622 * 8 7 6 10 10 C 1.38215 * 120.02537 * 180.27948 * 9 8 7 11 11 C 1.38238 * 120.01126 * 359.44038 * 10 9 8 12 12 C 1.38325 * 119.98878 * 0.28199 * 11 10 9 13 13 Cl 1.73606 * 120.01335 * 179.97438 * 12 11 10 14 14 C 1.38193 * 119.99765 * 90.00024 * 8 7 6 15 15 C 1.34772 * 120.00532 * 270.00169 * 6 5 4 16 16 O 1.21582 * 120.00452 * 179.97438 * 15 6 5 17 17 N 1.34777 * 119.99537 * 0.02562 * 15 6 5 18 18 C 1.46509 * 119.99845 * 179.97438 * 17 15 6 19 19 C 1.50700 * 109.47186 * 180.02562 * 18 17 15 20 20 H 1.07997 * 119.99767 * 0.02562 * 19 18 17 21 21 C 1.37875 * 119.99905 * 180.02562 * 19 18 17 22 22 N 1.31510 * 120.00134 * 359.97438 * 21 19 18 23 23 Si 1.86800 * 119.99805 * 179.97438 * 21 19 18 24 24 H 1.48497 * 109.47051 * 90.00027 * 23 21 19 25 25 H 1.48503 * 109.47039 * 209.99710 * 23 21 19 26 26 H 1.48499 * 109.46979 * 329.99468 * 23 21 19 27 27 H 1.09002 * 109.46556 * 296.04771 * 1 2 3 28 28 H 1.09002 * 109.47042 * 56.03809 * 1 2 3 29 29 H 1.08996 * 109.47359 * 176.04457 * 1 2 3 30 30 H 1.08999 * 109.47283 * 183.95251 * 3 2 1 31 31 H 1.08994 * 109.47272 * 303.95917 * 3 2 1 32 32 H 1.09004 * 109.46965 * 63.95912 * 3 2 1 33 33 H 1.09006 * 109.46949 * 306.04256 * 4 2 1 34 34 H 1.09001 * 109.47243 * 186.04380 * 4 2 1 35 35 H 1.09006 * 109.46768 * 60.00417 * 5 4 2 36 36 H 1.09001 * 109.47584 * 300.00444 * 5 4 2 37 37 H 1.08998 * 109.47483 * 149.99803 * 7 6 5 38 38 H 1.09000 * 109.47209 * 29.99624 * 7 6 5 39 39 H 1.07997 * 119.98420 * 0.02562 * 9 8 7 40 40 H 1.08002 * 119.99636 * 179.72646 * 10 9 8 41 41 H 1.07999 * 120.00577 * 180.25936 * 11 10 9 42 42 H 1.08003 * 120.00423 * 0.02562 * 14 8 7 43 43 H 0.97003 * 120.00506 * 359.97438 * 17 15 6 44 44 H 1.09007 * 109.46744 * 300.00191 * 18 17 15 45 45 H 1.09000 * 109.46851 * 60.00157 * 18 17 15 46 46 H 0.96998 * 120.00504 * 180.02562 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.9955 -0.7661 1.1375 5 6 1.6314 -2.2427 0.9701 6 7 2.1570 -3.0068 2.1043 7 6 1.3376 -3.1938 3.3042 8 6 1.5954 -2.0654 4.2693 9 6 2.6001 -2.1785 5.2125 10 6 2.8334 -1.1465 6.1017 11 6 2.0697 0.0042 6.0412 12 6 1.0682 0.1204 5.0942 13 17 0.1084 1.5649 5.0180 14 6 0.8313 -0.9155 4.2079 15 6 3.3942 -3.5378 2.0437 16 8 3.8306 -4.1715 2.9851 17 7 4.1482 -3.3654 0.9400 18 6 5.4934 -3.9421 0.8743 19 6 6.1195 -3.6066 -0.4548 20 1 5.5705 -3.0218 -1.1780 21 6 7.3931 -4.0461 -0.7474 22 7 8.0618 -4.7577 0.1335 23 14 8.1689 -3.6308 -2.3951 24 1 8.9053 -2.3459 -2.2857 25 1 9.1117 -4.7100 -2.7844 26 1 7.1065 -3.5063 -3.4251 27 1 -0.3632 0.4513 0.9233 28 1 -0.3633 0.5741 -0.8524 29 1 -0.3634 -1.0252 -0.0709 30 1 3.0829 1.3431 -0.0708 31 1 1.5899 1.9163 -0.8523 32 1 1.7046 1.8723 0.9234 33 1 1.5612 -0.3874 2.0628 34 1 3.0798 -0.6613 1.1755 35 1 2.0657 -2.6214 0.0448 36 1 0.5471 -2.3475 0.9321 37 1 1.5955 -4.1417 3.7763 38 1 0.2835 -3.2009 3.0269 39 1 3.2002 -3.0754 5.2569 40 1 3.6154 -1.2372 6.8411 41 1 2.2548 0.8123 6.7334 42 1 0.0492 -0.8257 3.4686 43 1 3.8002 -2.8595 0.1890 44 1 6.1046 -3.5308 1.6777 45 1 5.4302 -5.0248 0.9836 46 1 8.9580 -5.0666 -0.0721 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000426426688.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 22:45:33 Heat of formation + Delta-G solvation = -0.538197 kcal Electronic energy + Delta-G solvation = -27902.354058 eV Core-core repulsion = 24046.130099 eV Total energy + Delta-G solvation = -3856.223959 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 339.145 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -40.17860 -38.98158 -37.57864 -36.66521 -35.22253 -34.21559 -32.54300 -31.59926 -30.86777 -29.31011 -27.71706 -27.46599 -25.75017 -24.22982 -22.78539 -22.56622 -21.46564 -21.24008 -19.24349 -18.02746 -17.23125 -16.22744 -16.04744 -15.80167 -15.52506 -15.31620 -15.22905 -14.85872 -14.58038 -14.40942 -13.88837 -13.74114 -13.36949 -13.31123 -13.25398 -13.07411 -12.55038 -12.22831 -12.12290 -11.99526 -11.83250 -11.73711 -11.65090 -11.56719 -11.53043 -11.29334 -11.03573 -10.93230 -10.90766 -10.84773 -10.25591 -9.46769 -9.33738 -9.04850 -8.78747 -8.70922 -8.57777 -8.35327 -7.73447 -6.12722 -4.18729 1.05095 1.11192 1.94912 3.04012 3.27246 3.33511 3.36490 3.62511 3.84115 3.99540 4.35094 4.59863 4.63595 4.73227 4.90762 4.95668 5.04349 5.06007 5.17454 5.21465 5.23708 5.26152 5.33752 5.41521 5.46038 5.52111 5.61688 5.68412 5.73680 5.76870 5.83492 5.84418 6.02262 6.04959 6.29571 6.45608 6.68515 6.72027 6.89318 6.91214 7.11641 7.52983 7.55093 7.59143 7.86081 8.04404 8.78333 8.91468 9.32256 9.49852 10.97516 Molecular weight = 339.15amu Principal moments of inertia in cm(-1) A = 0.011762 B = 0.003362 C = 0.002952 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2379.952086 B = 8326.575398 C = 9483.880696 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 N -0.542 5.542 3 C 0.026 3.974 4 C 0.029 3.971 5 C 0.117 3.883 6 N -0.632 5.632 7 C 0.174 3.826 8 C -0.088 4.088 9 C -0.083 4.083 10 C -0.110 4.110 11 C -0.111 4.111 12 C -0.042 4.042 13 Cl -0.081 7.081 14 C -0.099 4.099 15 C 0.697 3.303 16 O -0.596 6.596 17 N -0.726 5.726 18 C 0.267 3.733 19 C -0.540 4.540 20 H 0.062 0.938 21 C 0.064 3.936 22 N -0.886 5.886 23 Si 0.902 3.098 24 H -0.279 1.279 25 H -0.285 1.285 26 H -0.272 1.272 27 H 0.024 0.976 28 H 0.067 0.933 29 H 0.069 0.931 30 H 0.071 0.929 31 H 0.067 0.933 32 H 0.024 0.976 33 H 0.045 0.955 34 H 0.080 0.920 35 H 0.086 0.914 36 H 0.075 0.925 37 H 0.097 0.903 38 H 0.081 0.919 39 H 0.140 0.860 40 H 0.131 0.869 41 H 0.129 0.871 42 H 0.127 0.873 43 H 0.389 0.611 44 H 0.024 0.976 45 H 0.024 0.976 46 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -18.476 11.335 7.099 22.809 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.128 4.128 2 N -0.266 5.266 3 C -0.122 4.122 4 C -0.100 4.100 5 C -0.008 4.008 6 N -0.370 5.370 7 C 0.050 3.950 8 C -0.090 4.090 9 C -0.102 4.102 10 C -0.128 4.128 11 C -0.130 4.130 12 C -0.068 4.068 13 Cl -0.052 7.052 14 C -0.119 4.119 15 C 0.398 3.602 16 O -0.475 6.475 17 N -0.379 5.379 18 C 0.146 3.854 19 C -0.578 4.578 20 H 0.080 0.920 21 C -0.139 4.139 22 N -0.524 5.524 23 Si 0.729 3.271 24 H -0.205 1.205 25 H -0.211 1.211 26 H -0.197 1.197 27 H 0.042 0.958 28 H 0.085 0.915 29 H 0.088 0.912 30 H 0.089 0.911 31 H 0.086 0.914 32 H 0.042 0.958 33 H 0.063 0.937 34 H 0.098 0.902 35 H 0.105 0.895 36 H 0.093 0.907 37 H 0.115 0.885 38 H 0.099 0.901 39 H 0.158 0.842 40 H 0.149 0.851 41 H 0.147 0.853 42 H 0.145 0.855 43 H 0.223 0.777 44 H 0.042 0.958 45 H 0.042 0.958 46 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -17.835 10.616 7.336 22.014 hybrid contribution 0.033 1.230 -0.500 1.328 sum -17.802 11.846 6.836 22.449 Atomic orbital electron populations 1.22461 0.87760 1.02231 1.00369 1.61896 1.07631 1.14004 1.43105 1.22365 1.01202 0.88452 1.00197 1.22777 1.01398 0.94141 0.91705 1.21451 0.99323 0.90264 0.89740 1.47164 1.15987 1.57312 1.16507 1.20138 0.94326 0.96469 0.84079 1.20375 0.95850 0.95856 0.96954 1.21455 0.95831 0.99662 0.93251 1.21184 0.99227 0.92925 0.99477 1.21037 0.95036 0.98792 0.98154 1.20843 0.96790 0.89203 0.99966 1.98358 1.71197 1.37590 1.98043 1.20854 1.00539 0.92221 0.98245 1.16077 0.79940 0.80007 0.84137 1.90838 1.72013 1.46777 1.37853 1.45905 1.18599 1.57432 1.15991 1.18972 0.75502 0.93883 0.97010 1.21227 1.00530 1.35238 1.00838 0.91952 1.24921 0.96822 0.94755 0.97421 1.69973 1.12236 1.35481 1.34695 0.86438 0.79172 0.78062 0.83387 1.20514 1.21064 1.19696 0.95768 0.91456 0.91181 0.91051 0.91407 0.95783 0.93715 0.90191 0.89545 0.90665 0.88459 0.90098 0.84223 0.85064 0.85291 0.85529 0.77704 0.95844 0.95771 0.92525 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.18 9.32 60.07 0.56 0.74 16 2 N -0.54 -6.07 5.02 -251.26 -1.26 -7.33 16 3 C 0.03 0.27 9.57 60.06 0.57 0.85 16 4 C 0.03 0.36 5.28 -3.83 -0.02 0.34 16 5 C 0.12 1.42 5.14 -4.04 -0.02 1.40 16 6 N -0.63 -9.28 2.46 -180.80 -0.44 -9.73 16 7 C 0.17 2.14 5.57 -5.19 -0.03 2.11 16 8 C -0.09 -1.08 5.39 -104.63 -0.56 -1.65 16 9 C -0.08 -1.10 9.70 -39.58 -0.38 -1.48 16 10 C -0.11 -1.26 10.05 -39.59 -0.40 -1.66 16 11 C -0.11 -1.20 9.83 -39.55 -0.39 -1.59 16 12 C -0.04 -0.46 6.32 -39.50 -0.25 -0.71 16 13 Cl -0.08 -0.82 28.96 -51.86 -1.50 -2.32 16 14 C -0.10 -1.09 7.33 -39.55 -0.29 -1.38 16 15 C 0.70 13.94 8.28 -86.92 -0.72 13.22 16 16 O -0.60 -13.90 15.42 5.29 0.08 -13.82 16 17 N -0.73 -15.55 5.41 -66.41 -0.36 -15.91 16 18 C 0.27 7.11 5.43 -5.19 -0.03 7.08 16 19 C -0.54 -14.72 9.28 -34.44 -0.32 -15.04 16 20 H 0.06 1.61 7.60 -52.49 -0.40 1.21 16 21 C 0.06 1.79 5.46 -17.82 -0.10 1.69 16 22 N -0.89 -26.12 13.29 55.43 0.74 -25.39 16 23 Si 0.90 20.99 29.54 -169.99 -5.02 15.97 16 24 H -0.28 -6.42 7.11 56.52 0.40 -6.02 16 25 H -0.28 -6.59 7.11 56.52 0.40 -6.19 16 26 H -0.27 -6.16 7.11 56.52 0.40 -5.76 16 27 H 0.02 0.21 8.14 -51.93 -0.42 -0.22 16 28 H 0.07 0.53 8.12 -51.93 -0.42 0.11 16 29 H 0.07 0.56 6.47 -51.93 -0.34 0.23 16 30 H 0.07 0.79 8.12 -51.93 -0.42 0.37 16 31 H 0.07 0.61 8.12 -51.93 -0.42 0.19 16 32 H 0.02 0.24 8.14 -51.93 -0.42 -0.18 16 33 H 0.04 0.54 5.24 -51.93 -0.27 0.27 16 34 H 0.08 1.20 8.06 -51.93 -0.42 0.78 16 35 H 0.09 1.15 6.36 -51.93 -0.33 0.82 16 36 H 0.08 0.73 6.31 -51.93 -0.33 0.40 16 37 H 0.10 1.32 7.37 -51.93 -0.38 0.93 16 38 H 0.08 0.75 7.84 -51.93 -0.41 0.34 16 39 H 0.14 2.06 7.55 -52.49 -0.40 1.67 16 40 H 0.13 1.26 8.06 -52.49 -0.42 0.83 16 41 H 0.13 1.16 8.06 -52.49 -0.42 0.74 16 42 H 0.13 1.22 7.73 -52.48 -0.41 0.81 16 43 H 0.39 7.48 6.05 -40.82 -0.25 7.24 16 44 H 0.02 0.69 8.14 -51.92 -0.42 0.27 16 45 H 0.02 0.71 8.14 -51.93 -0.42 0.29 16 46 H 0.27 7.33 8.31 -40.82 -0.34 6.99 16 LS Contribution 391.28 15.07 5.90 5.90 Total: -1.00 -31.49 391.28 -11.10 -42.59 By element: Atomic # 1 Polarization: 12.98 SS G_CDS: -6.86 Total: 6.12 kcal Atomic # 6 Polarization: 6.28 SS G_CDS: -2.37 Total: 3.90 kcal Atomic # 7 Polarization: -57.02 SS G_CDS: -1.33 Total: -58.35 kcal Atomic # 8 Polarization: -13.90 SS G_CDS: 0.08 Total: -13.82 kcal Atomic # 14 Polarization: 20.99 SS G_CDS: -5.02 Total: 15.97 kcal Atomic # 17 Polarization: -0.82 SS G_CDS: -1.50 Total: -2.32 kcal Total LS contribution 5.90 Total: 5.90 kcal Total: -31.49 -11.10 -42.59 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000426426688.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.054 kcal (2) G-P(sol) polarization free energy of solvation -31.489 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.566 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.104 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.593 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.538 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds