Wall clock time and date at job start Tue Mar 31 2020 22:28:08
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
*******************************************************************************
* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= -1
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* DEV - DEVELOPER OPTIONS ARE ALLOWED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS USER-SPECIFIED
* DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06
* IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345
* ALPHA - THE SOLVENT ALPHA IS 0.00
* BETA - THE SOLVENT BETA IS 0.00
* GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS
* 38.93 CAL MOL^-1 ANGSTROM^-2
* FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00
* FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00
*******************************************************************************
Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 C
2 2 N 1.46503 * 1
3 3 C 1.35629 * 125.67813 * 2 1
4 4 C 1.35510 * 108.85274 * 179.97438 * 3 2 1
5 5 Cl 1.73602 * 126.07488 * 179.97438 * 4 3 2
6 6 C 1.39889 * 107.85435 * 359.97438 * 4 3 2
7 7 C 1.37630 * 125.67623 * 179.68655 * 2 1 3
8 8 C 1.46675 * 126.22337 * 0.02562 * 7 2 1
9 9 O 1.21694 * 119.99947 * 26.68976 * 8 7 2
10 10 N 1.34778 * 120.00099 * 206.69688 * 8 7 2
11 11 C 1.46928 * 120.62786 * 6.83437 * 10 8 7
12 12 C 1.52770 * 109.00695 * 233.58574 * 11 10 8
13 13 C 1.53035 * 109.38225 * 305.58823 * 12 11 10
14 14 C 1.52999 * 109.45764 * 181.25980 * 13 12 11
15 15 C 1.53000 * 109.47162 * 64.93587 * 14 13 12
16 16 N 1.46499 * 109.47033 * 179.97438 * 15 14 13
17 17 C 1.36936 * 120.00037 * 179.97438 * 16 15 14
18 18 H 1.08010 * 119.99749 * 0.02562 * 17 16 15
19 19 C 1.38809 * 120.00291 * 180.02562 * 17 16 15
20 20 N 1.31613 * 119.99913 * 359.97438 * 19 17 16
21 21 Si 1.86799 * 120.00137 * 180.02562 * 19 17 16
22 22 H 1.48502 * 109.47415 * 359.97438 * 21 19 17
23 23 H 1.48497 * 109.47356 * 119.99628 * 21 19 17
24 24 H 1.48505 * 109.47403 * 239.99793 * 21 19 17
25 25 C 1.53041 * 109.53764 * 61.24375 * 13 12 11
26 26 C 1.46924 * 120.63337 * 187.11995 * 10 8 7
27 27 H 1.08994 * 109.47070 * 95.36341 * 1 2 3
28 28 H 1.09002 * 109.46955 * 215.37113 * 1 2 3
29 29 H 1.09009 * 109.46998 * 335.36414 * 1 2 3
30 30 H 1.08004 * 125.57184 * 359.97438 * 3 2 1
31 31 H 1.07999 * 126.45144 * 179.97438 * 6 4 3
32 32 H 1.08997 * 109.58664 * 353.42056 * 11 10 8
33 33 H 1.09000 * 109.58908 * 113.85059 * 11 10 8
34 34 H 1.08999 * 109.56260 * 185.54977 * 12 11 10
35 35 H 1.08999 * 109.35678 * 65.49930 * 12 11 10
36 36 H 1.08998 * 109.46151 * 301.22048 * 13 12 11
37 37 H 1.09009 * 109.46983 * 184.93100 * 14 13 12
38 38 H 1.08998 * 109.47340 * 304.93344 * 14 13 12
39 39 H 1.09000 * 109.46598 * 299.99687 * 15 14 13
40 40 H 1.08998 * 109.47191 * 59.99665 * 15 14 13
41 41 H 0.96997 * 120.00486 * 359.97438 * 16 15 14
42 42 H 0.97002 * 120.00433 * 180.02562 * 20 19 17
43 43 H 1.09001 * 109.49960 * 178.68423 * 25 13 12
44 44 H 1.08990 * 109.50132 * 58.58485 * 25 13 12
45 45 H 1.09004 * 109.58519 * 246.15270 * 26 10 8
46 46 H 1.09003 * 109.58284 * 6.43068 * 26 10 8
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 6 0.0000 0.0000 0.0000
2 7 1.4650 0.0000 0.0000
3 6 2.2561 1.1017 0.0000
4 6 3.5531 0.7095 0.0006
5 17 4.9378 1.7567 0.0002
6 6 3.5783 -0.6892 0.0015
7 6 2.2677 -1.1180 0.0061
8 6 1.8120 -2.5121 0.0132
9 8 0.7281 -2.8004 -0.4591
10 7 2.5936 -3.4739 0.5429
11 6 3.8341 -3.1258 1.2492
12 6 4.9926 -3.9109 0.6365
13 6 4.6582 -5.4042 0.6514
14 6 5.8304 -6.1948 0.0669
15 6 7.0518 -6.0428 0.9758
16 7 8.1740 -6.8004 0.4165
17 6 9.3816 -6.8122 1.0621
18 1 9.5065 -6.2634 1.9839
19 6 10.4451 -7.5295 0.5318
20 7 10.2928 -8.1987 -0.5912
21 14 12.0922 -7.5463 1.4129
22 1 12.0030 -6.7220 2.6449
23 1 12.4456 -8.9423 1.7754
24 1 13.1378 -6.9873 0.5186
25 6 3.4040 -5.6563 -0.1885
26 6 2.2247 -4.8907 0.4196
27 1 -0.3633 -0.0961 -1.0231
28 1 -0.3633 -0.8380 0.5949
29 1 -0.3633 0.9342 0.4284
30 1 1.9089 2.1244 -0.0004
31 1 4.4584 -1.3151 0.0018
32 1 4.0246 -2.0574 1.1481
33 1 3.7388 -3.3839 2.3039
34 1 5.8991 -3.7352 1.2156
35 1 5.1476 -3.5830 -0.3914
36 1 4.4790 -5.7260 1.6773
37 1 5.5590 -7.2482 -0.0037
38 1 6.0669 -5.8131 -0.9263
39 1 7.3232 -4.9895 1.0465
40 1 6.8153 -6.4245 1.9691
41 1 8.0618 -7.2935 -0.4112
42 1 11.0358 -8.7003 -0.9616
43 1 3.1798 -6.7230 -0.1966
44 1 3.5740 -5.3120 -1.2086
45 1 1.9954 -5.2957 1.4053
46 1 1.3520 -4.9861 -0.2266
RHF calculation, no. of doubly occupied orbitals= 61
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988).
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93
& DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV
ZINC001753570517.mol2 46
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Tue Mar 31 2020 22:28:08
Heat of formation + Delta-G solvation = 24.946071 kcal
Electronic energy + Delta-G solvation = -27018.814702 eV
Core-core repulsion = 23163.695823 eV
Total energy + Delta-G solvation = -3855.118878 eV
No. of doubly occupied orbitals = 61
Molecular weight
(most abundant/longest-lived isotopes) = 339.145 amu
Computer time = 0.65 seconds
Orbital eigenvalues (eV)
-42.00877 -39.94862 -37.92760 -36.65824 -35.41650 -33.83624 -33.05871 -31.73803
-31.01672 -29.59842 -28.35596 -26.93180 -25.31535 -23.57246 -23.37624 -22.15243
-21.39743 -20.72286 -20.14929 -19.23520 -17.79380 -17.04808 -16.75946 -16.04301
-15.88421 -15.20682 -14.82214 -14.70713 -14.63072 -14.48015 -13.97506 -13.83936
-13.74009 -13.51266 -13.46670 -13.22709 -12.90603 -12.83976 -12.70672 -12.46946
-12.11330 -11.75752 -11.31594 -11.25526 -11.15446 -11.09441 -10.98650 -10.78347
-10.59734 -10.32488 -10.23360 -10.08661 -9.90527 -9.65485 -8.99593 -8.91122
-8.83477 -8.54361 -6.88212 -5.73969 -3.02290 1.05670 1.76514 2.06377
2.35677 2.89981 2.98998 3.44949 3.50347 3.52755 4.14945 4.35330
4.49305 4.59373 4.66941 4.76887 4.79626 4.83757 4.85252 4.98359
5.07513 5.17005 5.19424 5.30956 5.41104 5.49112 5.57377 5.63707
5.69204 5.72719 5.83178 5.86907 6.01122 6.01890 6.07767 6.19522
6.32259 6.38276 6.39256 6.44396 6.47684 6.59965 6.89978 6.95002
7.11263 7.72599 7.83293 8.45369 9.56163 10.15730 10.49695 11.49209
Molecular weight = 339.15amu
Principal moments of inertia in cm(-1)
A = 0.013011 B = 0.002434 C = 0.002099
Principal moments of inertia in units of 10**(-40)*gram-cm**2
A = 2151.516020 B =11501.417410 C =13337.796548
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 C 0.074 3.926
2 N -0.405 5.405
3 C 0.029 3.971
4 C -0.120 4.120
5 Cl -0.045 7.045
6 C -0.138 4.138
7 C -0.031 4.031
8 C 0.590 3.410
9 O -0.549 6.549
10 N -0.592 5.592
11 C 0.072 3.928
12 C -0.134 4.134
13 C -0.082 4.082
14 C -0.121 4.121
15 C 0.153 3.847
16 N -0.735 5.735
17 C -0.237 4.237
18 H 0.070 0.930
19 C -0.016 4.016
20 N -0.934 5.934
21 Si 0.906 3.094
22 H -0.280 1.280
23 H -0.292 1.292
24 H -0.292 1.292
25 C -0.130 4.130
26 C 0.115 3.885
27 H 0.084 0.916
28 H 0.092 0.908
29 H 0.088 0.912
30 H 0.178 0.822
31 H 0.169 0.831
32 H 0.113 0.887
33 H 0.071 0.929
34 H 0.088 0.912
35 H 0.068 0.932
36 H 0.072 0.928
37 H 0.062 0.938
38 H 0.061 0.939
39 H 0.020 0.980
40 H 0.015 0.985
41 H 0.383 0.617
42 H 0.254 0.746
43 H 0.078 0.922
44 H 0.067 0.933
45 H 0.070 0.930
46 H 0.091 0.909
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges -22.706 19.088 2.467 29.766
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 C -0.066 4.066
2 N -0.078 5.078
3 C -0.108 4.108
4 C -0.153 4.153
5 Cl -0.017 7.017
6 C -0.164 4.164
7 C -0.145 4.145
8 C 0.379 3.621
9 O -0.428 6.428
10 N -0.325 5.325
11 C -0.050 4.050
12 C -0.172 4.172
13 C -0.101 4.101
14 C -0.159 4.159
15 C 0.025 3.975
16 N -0.379 5.379
17 C -0.368 4.368
18 H 0.088 0.912
19 C -0.212 4.212
20 N -0.583 5.583
21 Si 0.738 3.262
22 H -0.206 1.206
23 H -0.219 1.219
24 H -0.219 1.219
25 C -0.168 4.168
26 C -0.007 4.007
27 H 0.102 0.898
28 H 0.110 0.890
29 H 0.106 0.894
30 H 0.196 0.804
31 H 0.186 0.814
32 H 0.131 0.869
33 H 0.089 0.911
34 H 0.106 0.894
35 H 0.087 0.913
36 H 0.091 0.909
37 H 0.081 0.919
38 H 0.080 0.920
39 H 0.038 0.962
40 H 0.033 0.967
41 H 0.216 0.784
42 H 0.064 0.936
43 H 0.096 0.904
44 H 0.086 0.914
45 H 0.088 0.912
46 H 0.109 0.891
Dipole moment (debyes) X Y Z Total
from point charges -23.446 19.011 2.360 30.277
hybrid contribution 1.198 -0.116 0.142 1.212
sum -22.248 18.895 2.502 29.296
Atomic orbital electron populations
1.22213 0.75192 1.04544 1.04682 1.43770 1.07042 1.04560 1.52456
1.21713 0.88949 0.92093 1.07997 1.19968 0.88200 0.91486 1.15663
1.98346 1.40362 1.65365 1.97619 1.21551 0.95672 0.93207 1.05955
1.20042 0.89750 0.87945 1.16759 1.16894 0.83934 0.83341 0.77977
1.90806 1.21333 1.82989 1.47683 1.47794 1.23854 1.06324 1.54479
1.22587 0.83234 1.02952 0.96180 1.21996 0.97778 0.95228 1.02209
1.21079 0.94516 0.94779 0.99717 1.21762 0.94540 0.99750 0.99828
1.20698 0.87113 0.94953 0.94708 1.42400 1.07996 1.58934 1.28570
1.19285 0.88245 1.24834 1.04468 0.91174 1.24749 0.98322 1.00460
0.97677 1.69669 1.31338 1.36491 1.20826 0.86122 0.84264 0.77194
0.78666 1.20552 1.21899 1.21875 1.22003 0.94411 1.00375 0.99994
1.21687 0.98512 0.78744 1.01723 0.89765 0.88979 0.89359 0.80439
0.81428 0.86928 0.91070 0.89399 0.91305 0.90945 0.91924 0.91989
0.96224 0.96673 0.78371 0.93598 0.90354 0.91388 0.91189 0.89098
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 13.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 C 0.07 0.45 10.31 59.85 0.62 1.07 16
2 N -0.41 -3.52 3.16 -120.19 -0.38 -3.90 16
3 C 0.03 0.22 11.35 -16.85 -0.19 0.03 16
4 C -0.12 -1.13 6.66 -39.94 -0.27 -1.40 16
5 Cl -0.05 -0.42 29.30 -51.86 -1.52 -1.94 16
6 C -0.14 -1.38 8.57 -39.09 -0.34 -1.72 16
7 C -0.03 -0.33 6.48 -81.98 -0.53 -0.86 16
8 C 0.59 7.07 7.45 -12.85 -0.10 6.97 16
9 O -0.55 -7.79 15.08 5.19 0.08 -7.71 16
10 N -0.59 -6.32 2.98 -174.57 -0.52 -6.84 16
11 C 0.07 0.68 5.78 -3.93 -0.02 0.66 16
12 C -0.13 -1.45 4.92 -26.83 -0.13 -1.59 16
13 C -0.08 -0.96 2.15 -90.58 -0.19 -1.16 16
14 C -0.12 -1.87 4.80 -26.73 -0.13 -2.00 16
15 C 0.15 3.00 6.02 -4.04 -0.02 2.98 16
16 N -0.74 -18.85 5.60 -59.91 -0.34 -19.19 16
17 C -0.24 -6.72 9.99 -15.06 -0.15 -6.87 16
18 H 0.07 1.93 7.83 -52.48 -0.41 1.52 16
19 C -0.02 -0.48 5.50 -17.43 -0.10 -0.57 16
20 N -0.93 -28.63 13.06 55.49 0.72 -27.91 16
21 Si 0.91 22.59 29.55 -169.99 -5.02 17.57 16
22 H -0.28 -6.74 7.11 56.52 0.40 -6.34 16
23 H -0.29 -7.29 7.11 56.52 0.40 -6.89 16
24 H -0.29 -7.29 7.11 56.52 0.40 -6.89 16
25 C -0.13 -1.36 5.36 -26.61 -0.14 -1.51 16
26 C 0.12 1.17 6.41 -3.71 -0.02 1.14 16
27 H 0.08 0.50 8.14 -51.93 -0.42 0.08 16
28 H 0.09 0.65 7.39 -51.93 -0.38 0.26 16
29 H 0.09 0.26 8.12 -51.92 -0.42 -0.16 16
30 H 0.18 0.82 8.06 -52.48 -0.42 0.40 16
31 H 0.17 1.58 5.87 -52.49 -0.31 1.27 16
32 H 0.11 1.00 3.17 -51.93 -0.16 0.84 16
33 H 0.07 0.62 8.14 -51.93 -0.42 0.20 16
34 H 0.09 1.00 6.50 -51.93 -0.34 0.66 16
35 H 0.07 0.78 8.14 -51.93 -0.42 0.36 16
36 H 0.07 0.84 8.14 -51.93 -0.42 0.41 16
37 H 0.06 1.00 8.14 -51.92 -0.42 0.57 16
38 H 0.06 1.00 8.14 -51.93 -0.42 0.58 16
39 H 0.02 0.39 6.53 -51.93 -0.34 0.05 16
40 H 0.02 0.31 8.14 -51.93 -0.42 -0.12 16
41 H 0.38 10.34 7.67 -40.82 -0.31 10.03 16
42 H 0.25 7.50 8.31 -40.82 -0.34 7.16 16
43 H 0.08 0.77 8.14 -51.93 -0.42 0.34 16
44 H 0.07 0.77 8.14 -51.93 -0.42 0.35 16
45 H 0.07 0.63 8.14 -51.93 -0.42 0.21 16
46 H 0.09 0.99 7.05 -51.93 -0.37 0.62 16
LS Contribution 379.72 15.07 5.72 5.72
Total: -1.00 -33.71 379.72 -9.80 -43.51
By element:
Atomic # 1 Polarization: 12.34 SS G_CDS: -6.83 Total: 5.50 kcal
Atomic # 6 Polarization: -3.10 SS G_CDS: -1.72 Total: -4.82 kcal
Atomic # 7 Polarization: -57.33 SS G_CDS: -0.51 Total: -57.84 kcal
Atomic # 8 Polarization: -7.79 SS G_CDS: 0.08 Total: -7.71 kcal
Atomic # 14 Polarization: 22.59 SS G_CDS: -5.02 Total: 17.57 kcal
Atomic # 17 Polarization: -0.42 SS G_CDS: -1.52 Total: -1.94 kcal
Total LS contribution 5.72 Total: 5.72 kcal
Total: -33.71 -9.80 -43.51 kcal
The number of atoms in the molecule is 46
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
ZINC001753570517.mol2 46
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute 68.456 kcal
(2) G-P(sol) polarization free energy of solvation -33.709 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.747 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.801 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.510 kcal
(6) G-S(sol) free energy of system = (1) + (5) 24.946 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 0.65 seconds