Wall clock time and date at job start Tue Mar 31 2020 23:44:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52999 * 109.47057 * 2 1 4 4 H 1.08999 * 109.47022 * 55.00508 * 3 2 1 5 5 C 1.52999 * 109.47549 * 295.00379 * 3 2 1 6 6 C 1.50699 * 109.47106 * 175.00184 * 3 2 1 7 7 O 1.21286 * 120.00039 * 95.34003 * 6 3 2 8 8 N 1.34777 * 120.00357 * 275.34780 * 6 3 2 9 9 C 1.46934 * 120.62680 * 355.31657 * 8 6 3 10 10 C 1.53189 * 108.77391 * 126.41715 * 9 8 6 11 11 C 1.53034 * 109.31515 * 54.63223 * 10 9 8 12 12 C 1.53037 * 109.54220 * 298.63370 * 11 10 9 13 13 H 1.09004 * 109.49580 * 301.38774 * 12 11 10 14 14 C 1.50696 * 109.50236 * 181.31917 * 12 11 10 15 15 O 1.21291 * 119.99787 * 240.00345 * 14 12 11 16 16 N 1.34770 * 120.00062 * 59.99765 * 14 12 11 17 17 C 1.46503 * 119.99887 * 180.02562 * 16 14 12 18 18 C 1.50699 * 109.47292 * 180.02562 * 17 16 14 19 19 O 1.21296 * 119.99712 * 359.97438 * 18 17 16 20 20 N 1.34775 * 120.00389 * 179.97438 * 18 17 16 21 21 C 1.37097 * 120.00114 * 179.97438 * 20 18 17 22 22 H 1.08004 * 120.00278 * 0.02562 * 21 20 18 23 23 C 1.38949 * 120.00105 * 180.02562 * 21 20 18 24 24 N 1.31411 * 119.99587 * 0.02562 * 23 21 20 25 25 Si 1.86803 * 120.00278 * 180.02562 * 23 21 20 26 26 H 1.48502 * 109.46954 * 359.97438 * 25 23 21 27 27 H 1.48497 * 109.47213 * 119.99993 * 25 23 21 28 28 H 1.48504 * 109.47073 * 239.99997 * 25 23 21 29 29 C 1.46925 * 120.63522 * 175.33683 * 8 6 3 30 30 H 1.08996 * 109.47279 * 179.97438 * 1 2 3 31 31 H 1.09009 * 109.46881 * 299.99794 * 1 2 3 32 32 H 1.09005 * 109.47393 * 59.99421 * 1 2 3 33 33 H 1.09002 * 109.46386 * 240.00667 * 2 1 3 34 34 H 1.08991 * 109.47319 * 120.00838 * 2 1 3 35 35 H 1.08992 * 109.47164 * 305.10698 * 5 3 2 36 36 H 1.09000 * 109.46963 * 65.11100 * 5 3 2 37 37 H 1.08998 * 109.46884 * 185.10579 * 5 3 2 38 38 H 1.08993 * 109.58710 * 6.62688 * 9 8 6 39 39 H 1.08999 * 109.58195 * 246.19774 * 9 8 6 40 40 H 1.09000 * 109.49590 * 294.68048 * 10 9 8 41 41 H 1.09005 * 109.49398 * 174.58637 * 10 9 8 42 42 H 1.09003 * 109.46103 * 178.60955 * 11 10 9 43 43 H 1.08997 * 109.46109 * 58.65884 * 11 10 9 44 44 H 0.96995 * 120.00536 * 0.02562 * 16 14 12 45 45 H 1.08998 * 109.47455 * 60.00069 * 17 16 14 46 46 H 1.09002 * 109.47034 * 299.99953 * 17 16 14 47 47 H 0.97005 * 119.99721 * 0.02562 * 20 18 17 48 48 H 0.97006 * 119.99416 * 179.97438 * 24 23 21 49 49 H 1.09006 * 109.58350 * 113.80016 * 29 8 6 50 50 H 1.09001 * 109.58649 * 353.38042 * 29 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6054 1.9815 0.8419 5 6 1.6352 2.1266 -1.3073 6 6 3.5419 1.4443 0.1238 7 8 4.2323 1.5124 -0.8711 8 7 4.1180 1.3701 1.3400 9 6 3.2981 1.3902 2.5591 10 6 3.6565 0.1708 3.4144 11 6 5.1650 0.1587 3.6716 12 6 5.9106 0.0502 2.3395 13 1 5.6030 -0.8594 1.8235 14 6 7.3949 0.0058 2.5959 15 8 8.1168 0.8613 2.1289 16 7 7.9201 -0.9845 3.3441 17 6 9.3631 -1.0274 3.5938 18 6 9.6894 -2.2239 4.4499 19 8 8.8037 -2.9674 4.8159 20 7 10.9654 -2.4678 4.8088 21 6 11.2622 -3.5560 5.5881 22 1 10.4736 -4.2181 5.9140 23 6 12.5776 -3.8072 5.9587 24 7 13.5370 -3.0014 5.5625 25 14 12.9821 -5.2904 7.0199 26 1 11.7337 -6.0326 7.3297 27 1 13.9196 -6.1807 6.2895 28 1 13.6144 -4.8365 8.2846 29 6 5.5777 1.2682 1.4720 30 1 -0.3633 -1.0276 -0.0005 31 1 -0.3633 0.5138 0.8901 32 1 -0.3634 0.5139 -0.8900 33 1 1.8932 -0.5138 -0.8901 34 1 1.8933 -0.5139 0.8898 35 1 1.9931 1.5376 -2.1516 36 1 0.5491 2.2066 -1.3543 37 1 2.0749 3.1232 -1.3470 38 1 2.2426 1.3504 2.2903 39 1 3.5003 2.3024 3.1204 40 1 3.3699 -0.7396 2.8881 41 1 3.1257 0.2246 4.3650 42 1 5.4194 -0.6943 4.3006 43 1 5.4548 1.0805 4.1759 44 1 7.3429 -1.6688 3.7173 45 1 9.6699 -0.1171 4.1089 46 1 9.8939 -1.1044 2.6448 47 1 11.6737 -1.8730 4.5164 48 1 14.4553 -3.1766 5.8215 49 1 5.9658 2.1705 1.9447 50 1 6.0263 1.1480 0.4858 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000343519366.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 23:44:21 Heat of formation + Delta-G solvation = -132.387333 kcal Electronic energy + Delta-G solvation = -29699.851589 eV Core-core repulsion = 25533.034152 eV Total energy + Delta-G solvation = -4166.817437 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 339.199 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -40.88823 -39.69804 -38.29063 -37.32477 -35.89442 -34.52789 -33.79371 -33.11713 -31.59543 -31.38995 -30.05362 -27.91721 -26.39006 -25.21586 -24.71172 -23.65932 -22.13854 -21.29045 -19.94889 -19.55712 -18.94739 -18.17639 -17.84702 -17.04725 -16.24099 -15.88669 -15.57400 -15.49438 -15.33265 -15.02792 -14.66801 -14.57922 -14.44623 -14.10588 -14.09780 -13.81163 -13.42884 -13.26098 -13.15250 -13.10097 -12.70691 -12.52489 -12.25041 -12.17752 -11.98897 -11.94315 -11.72235 -11.65776 -11.49025 -11.27843 -11.16773 -11.10047 -11.06510 -10.88537 -10.43432 -10.35313 -9.90392 -9.67869 -9.67520 -8.92430 -8.83563 -8.67009 -8.13397 -6.54428 -3.96608 2.36240 2.63562 2.73495 3.08013 3.20206 3.26043 3.38679 3.70408 4.08503 4.08997 4.32517 4.38013 4.44066 4.54432 4.57321 4.67428 4.79613 4.84417 4.91298 4.92015 5.02491 5.13365 5.14010 5.14915 5.19237 5.28983 5.41631 5.43940 5.51554 5.55814 5.56462 5.62213 5.65003 5.71149 5.85726 5.87481 5.89076 5.92484 5.93294 5.97951 6.03734 6.22098 6.62145 7.12914 7.43332 7.73584 7.88917 7.94384 8.36714 8.42452 9.01525 9.35986 9.83519 10.62417 Molecular weight = 339.20amu Principal moments of inertia in cm(-1) A = 0.026119 B = 0.001887 C = 0.001830 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1071.774202 B =14838.494131 C =15299.294206 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.114 4.114 3 C -0.111 4.111 4 H 0.093 0.907 5 C -0.135 4.135 6 C 0.518 3.482 7 O -0.536 6.536 8 N -0.613 5.613 9 C 0.101 3.899 10 C -0.133 4.133 11 C -0.114 4.114 12 C -0.119 4.119 13 H 0.101 0.899 14 C 0.519 3.481 15 O -0.546 6.546 16 N -0.704 5.704 17 C 0.108 3.892 18 C 0.428 3.572 19 O -0.598 6.598 20 N -0.549 5.549 21 C -0.305 4.305 22 H 0.106 0.894 23 C 0.025 3.975 24 N -0.894 5.894 25 Si 0.933 3.067 26 H -0.267 1.267 27 H -0.280 1.280 28 H -0.280 1.280 29 C 0.133 3.867 30 H 0.058 0.942 31 H 0.055 0.945 32 H 0.059 0.941 33 H 0.070 0.930 34 H 0.067 0.933 35 H 0.065 0.935 36 H 0.063 0.937 37 H 0.057 0.943 38 H 0.089 0.911 39 H 0.072 0.928 40 H 0.071 0.929 41 H 0.082 0.918 42 H 0.078 0.922 43 H 0.073 0.927 44 H 0.411 0.589 45 H 0.084 0.916 46 H 0.084 0.916 47 H 0.396 0.604 48 H 0.274 0.726 49 H 0.078 0.922 50 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -25.022 9.526 -6.844 27.635 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.152 4.152 3 C -0.133 4.133 4 H 0.111 0.889 5 C -0.192 4.192 6 C 0.306 3.694 7 O -0.412 6.412 8 N -0.346 5.346 9 C -0.022 4.022 10 C -0.171 4.171 11 C -0.152 4.152 12 C -0.141 4.141 13 H 0.119 0.881 14 C 0.304 3.696 15 O -0.424 6.424 16 N -0.358 5.358 17 C -0.020 4.020 18 C 0.213 3.787 19 O -0.485 6.485 20 N -0.183 5.183 21 C -0.435 4.435 22 H 0.124 0.876 23 C -0.178 4.178 24 N -0.534 5.534 25 Si 0.759 3.241 26 H -0.191 1.191 27 H -0.206 1.206 28 H -0.206 1.206 29 C 0.010 3.990 30 H 0.077 0.923 31 H 0.075 0.925 32 H 0.078 0.922 33 H 0.089 0.911 34 H 0.086 0.914 35 H 0.085 0.915 36 H 0.082 0.918 37 H 0.076 0.924 38 H 0.107 0.893 39 H 0.090 0.910 40 H 0.090 0.910 41 H 0.101 0.899 42 H 0.097 0.903 43 H 0.091 0.909 44 H 0.249 0.751 45 H 0.102 0.898 46 H 0.102 0.898 47 H 0.230 0.770 48 H 0.084 0.916 49 H 0.096 0.904 50 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -24.473 9.659 -7.424 27.337 hybrid contribution 0.653 -0.747 0.729 1.231 sum -23.820 8.912 -6.695 26.299 Atomic orbital electron populations 1.21809 0.94800 1.02116 1.02142 1.21491 0.96574 0.94033 1.03120 1.21410 0.91790 0.98963 1.01112 0.88938 1.21677 1.00918 1.00714 0.95929 1.20737 0.90623 0.75511 0.82500 1.90710 1.64978 1.49133 1.36413 1.48158 1.07320 1.73195 1.05955 1.21890 0.95591 0.98965 0.85748 1.21927 0.96263 0.98482 1.00449 1.21554 0.94544 1.03786 0.95357 1.21628 0.92472 1.01440 0.98605 0.88104 1.20288 0.89749 0.81336 0.78275 1.90712 1.62062 1.38761 1.50897 1.45703 1.08843 1.28962 1.52293 1.20970 0.81709 0.98824 1.00476 1.19737 0.84190 0.88251 0.86498 1.90493 1.46533 1.50926 1.60556 1.41810 1.06215 1.25529 1.44763 1.19780 0.93698 1.03495 1.26481 0.87606 1.25339 0.95211 0.99073 0.98134 1.69627 1.01056 1.37517 1.45168 0.85752 0.78708 0.80479 0.79113 1.19134 1.20593 1.20600 1.21332 0.79078 0.96881 1.01690 0.92297 0.92540 0.92193 0.91101 0.91392 0.91545 0.91780 0.92359 0.89271 0.90966 0.91020 0.89934 0.90304 0.90855 0.75115 0.89793 0.89804 0.77019 0.91607 0.90366 0.88261 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.68 9.67 37.16 0.36 -0.32 16 2 C -0.11 -0.71 5.24 -26.73 -0.14 -0.85 16 3 C -0.11 -0.80 1.89 -91.77 -0.17 -0.97 16 4 H 0.09 0.47 6.29 -51.93 -0.33 0.15 16 5 C -0.13 -0.98 8.26 37.16 0.31 -0.67 16 6 C 0.52 5.64 6.80 -10.99 -0.07 5.56 16 7 O -0.54 -8.12 15.63 5.55 0.09 -8.04 16 8 N -0.61 -5.89 2.97 -172.76 -0.51 -6.40 16 9 C 0.10 0.62 6.25 -3.71 -0.02 0.60 16 10 C -0.13 -0.82 6.08 -26.62 -0.16 -0.98 16 11 C -0.11 -1.00 5.07 -26.69 -0.14 -1.14 16 12 C -0.12 -1.34 2.68 -91.66 -0.25 -1.58 16 13 H 0.10 1.08 8.14 -51.93 -0.42 0.66 16 14 C 0.52 7.82 7.16 -10.99 -0.08 7.75 16 15 O -0.55 -10.01 15.92 5.55 0.09 -9.92 16 16 N -0.70 -11.26 5.41 -61.47 -0.33 -11.59 16 17 C 0.11 1.96 6.15 -5.19 -0.03 1.92 16 18 C 0.43 9.65 7.85 -10.99 -0.09 9.56 16 19 O -0.60 -15.00 15.24 5.54 0.08 -14.91 16 20 N -0.55 -13.47 5.29 -10.96 -0.06 -13.53 16 21 C -0.31 -8.22 9.68 -14.93 -0.14 -8.36 16 22 H 0.11 2.97 7.16 -52.48 -0.38 2.59 16 23 C 0.03 0.66 5.50 -17.47 -0.10 0.56 16 24 N -0.89 -23.74 13.05 55.50 0.72 -23.01 16 25 Si 0.93 20.37 29.55 -169.99 -5.02 15.35 16 26 H -0.27 -5.81 7.11 56.52 0.40 -5.41 16 27 H -0.28 -6.04 7.11 56.52 0.40 -5.64 16 28 H -0.28 -6.03 7.11 56.52 0.40 -5.63 16 29 C 0.13 1.58 5.05 -3.71 -0.02 1.56 16 30 H 0.06 0.25 8.14 -51.93 -0.42 -0.17 16 31 H 0.06 0.21 8.14 -51.92 -0.42 -0.22 16 32 H 0.06 0.26 6.68 -51.93 -0.35 -0.09 16 33 H 0.07 0.53 8.14 -51.93 -0.42 0.11 16 34 H 0.07 0.40 8.01 -51.93 -0.42 -0.01 16 35 H 0.07 0.57 8.04 -51.93 -0.42 0.15 16 36 H 0.06 0.33 6.82 -51.93 -0.35 -0.03 16 37 H 0.06 0.47 8.14 -51.93 -0.42 0.04 16 38 H 0.09 0.37 5.27 -51.93 -0.27 0.10 16 39 H 0.07 0.41 8.14 -51.93 -0.42 -0.02 16 40 H 0.07 0.45 8.14 -51.93 -0.42 0.02 16 41 H 0.08 0.38 8.14 -51.93 -0.42 -0.04 16 42 H 0.08 0.72 7.53 -51.93 -0.39 0.32 16 43 H 0.07 0.66 8.14 -51.93 -0.42 0.23 16 44 H 0.41 6.39 6.84 -40.82 -0.28 6.11 16 45 H 0.08 1.46 8.14 -51.93 -0.42 1.03 16 46 H 0.08 1.48 8.14 -51.93 -0.42 1.06 16 47 H 0.40 9.38 7.90 -40.82 -0.32 9.06 16 48 H 0.27 6.86 8.31 -40.82 -0.34 6.52 16 49 H 0.08 0.97 7.96 -51.93 -0.41 0.55 16 50 H 0.10 1.44 7.03 -51.93 -0.37 1.07 16 LS Contribution 401.12 15.07 6.04 6.04 Total: -1.00 -33.11 401.12 -7.71 -40.83 By element: Atomic # 1 Polarization: 20.61 SS G_CDS: -8.07 Total: 12.54 kcal Atomic # 6 Polarization: 13.39 SS G_CDS: -0.74 Total: 12.64 kcal Atomic # 7 Polarization: -54.35 SS G_CDS: -0.18 Total: -54.53 kcal Atomic # 8 Polarization: -33.13 SS G_CDS: 0.26 Total: -32.87 kcal Atomic # 14 Polarization: 20.37 SS G_CDS: -5.02 Total: 15.35 kcal Total LS contribution 6.04 Total: 6.04 kcal Total: -33.11 -7.71 -40.83 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000343519366.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.562 kcal (2) G-P(sol) polarization free energy of solvation -33.115 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -124.677 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.710 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.825 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.387 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds