Wall clock time and date at job start Tue Mar 31 2020 23:15:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.34420 * 124.34432 * 2 1 4 4 O 1.21277 * 124.94540 * 359.62635 * 3 2 1 5 5 C 1.51283 * 110.11438 * 179.58779 * 3 2 1 6 6 C 1.54628 * 104.19737 * 343.75194 * 5 3 2 7 7 H 1.09002 * 110.96843 * 266.64502 * 6 5 3 8 8 C 1.50700 * 110.97396 * 142.91426 * 6 5 3 9 9 O 1.21210 * 119.99922 * 335.79551 * 8 6 5 10 10 O 1.34314 * 119.99742 * 156.07319 * 8 6 5 11 11 C 1.34921 * 116.99510 * 179.72746 * 10 8 6 12 12 H 1.08002 * 119.99984 * 359.97438 * 11 10 8 13 13 C 1.38750 * 119.99951 * 180.02562 * 11 10 8 14 14 N 1.31441 * 120.00332 * 179.97438 * 13 11 10 15 15 Si 1.86806 * 119.99855 * 359.97438 * 13 11 10 16 16 H 1.48502 * 109.46897 * 90.00509 * 15 13 11 17 17 H 1.48503 * 109.47246 * 210.00350 * 15 13 11 18 18 H 1.48500 * 109.47181 * 330.00470 * 15 13 11 19 19 C 1.46820 * 124.33719 * 179.97438 * 2 1 3 20 20 H 1.08998 * 110.28569 * 316.00319 * 19 2 1 21 21 C 1.50704 * 110.23270 * 78.02271 * 19 2 1 22 22 C 1.38267 * 119.97072 * 216.00715 * 21 19 2 23 23 C 1.38218 * 120.06125 * 179.97438 * 22 21 19 24 24 C 1.38330 * 120.00782 * 0.02562 * 23 22 21 25 25 Cl 1.73598 * 120.01988 * 179.97438 * 24 23 22 26 26 C 1.38543 * 119.95104 * 0.02562 * 24 23 22 27 27 F 1.35100 * 120.02599 * 180.02562 * 26 24 23 28 28 C 1.38189 * 119.97807 * 35.72913 * 21 19 2 29 29 H 1.08993 * 109.47353 * 359.97438 * 1 2 3 30 30 H 1.08998 * 109.46770 * 119.97628 * 1 2 3 31 31 H 1.09005 * 109.46651 * 239.97061 * 1 2 3 32 32 H 1.08997 * 110.49306 * 225.07089 * 5 3 2 33 33 H 1.09005 * 110.48850 * 102.42342 * 5 3 2 34 34 H 0.97003 * 120.00295 * 179.97438 * 14 13 11 35 35 H 1.07993 * 119.97180 * 359.97438 * 22 21 19 36 36 H 1.08002 * 119.99599 * 180.02562 * 23 22 21 37 37 H 1.07999 * 120.00658 * 0.02877 * 28 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2234 1.1099 0.0000 4 8 1.7945 2.2442 -0.0065 5 6 3.6898 0.7380 0.0102 6 6 3.7011 -0.7485 0.4358 7 1 3.8275 -0.8446 1.5142 8 6 4.7718 -1.5121 -0.3001 9 8 5.1750 -1.1112 -1.3706 10 8 5.2753 -2.6400 0.2276 11 6 6.2269 -3.2779 -0.4850 12 1 6.5501 -2.8773 -1.4345 13 6 6.7896 -4.4492 0.0014 14 7 7.7164 -5.0710 -0.6930 15 14 6.2301 -5.1424 1.6434 16 1 5.0928 -6.0723 1.4263 17 1 7.3539 -5.8751 2.2802 18 1 5.7989 -4.0310 2.5289 19 6 2.2932 -1.2123 0.0005 20 1 1.8990 -1.9389 0.7110 21 6 2.3449 -1.8088 -1.3825 22 6 2.3700 -3.1821 -1.5419 23 6 2.4168 -3.7312 -2.8095 24 6 2.4392 -2.9068 -3.9201 25 17 2.4987 -3.5961 -5.5123 26 6 2.4151 -1.5308 -3.7608 27 9 2.4363 -0.7243 -4.8444 28 6 2.3613 -0.9831 -2.4904 29 1 -0.3634 1.0276 0.0005 30 1 -0.3633 -0.5135 -0.8902 31 1 -0.3633 -0.5143 0.8898 32 1 4.2326 1.3461 0.7338 33 1 4.1195 0.8531 -0.9849 34 1 8.1100 -5.8896 -0.3527 35 1 2.3530 -3.8262 -0.6753 36 1 2.4360 -4.8039 -2.9328 37 1 2.3376 0.0893 -2.3651 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000758753784.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 23:15:55 Heat of formation + Delta-G solvation = -122.035360 kcal Electronic energy + Delta-G solvation = -28349.815067 eV Core-core repulsion = 24033.591872 eV Total energy + Delta-G solvation = -4316.223195 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 341.066 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -48.83100 -41.33673 -39.12456 -38.77729 -36.83685 -36.18855 -35.43859 -32.91353 -32.38182 -31.14978 -30.67277 -27.73987 -26.94148 -25.59185 -23.45470 -22.91240 -21.86742 -19.75982 -19.55574 -18.10159 -18.03964 -17.05132 -16.81258 -16.35758 -16.33432 -15.76623 -15.66058 -15.35026 -15.02072 -14.74195 -14.13850 -13.93273 -13.72381 -13.69232 -13.55489 -13.29364 -12.92270 -12.84914 -12.49116 -12.41946 -12.21448 -12.08151 -11.99280 -11.63162 -11.31937 -11.22654 -11.04257 -10.84350 -10.59254 -10.47200 -9.95842 -9.80110 -9.33799 -9.02865 -8.86388 -8.77432 -8.54729 -6.46040 -4.21937 0.94106 1.19323 2.06571 2.46125 2.68927 2.99897 3.15103 3.19545 3.26343 3.46198 3.73455 4.10449 4.13638 4.25405 4.42235 4.55206 4.69088 4.83168 5.00367 5.05968 5.11552 5.17308 5.21175 5.28144 5.39060 5.56199 5.58275 5.71331 5.83006 5.93247 5.98832 6.07631 6.13656 6.23539 6.45780 6.72497 6.88079 7.61654 7.93788 8.02106 8.50044 8.91089 9.54540 10.62090 Molecular weight = 341.07amu Principal moments of inertia in cm(-1) A = 0.008478 B = 0.006170 C = 0.004149 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3301.942638 B = 4537.208559 C = 6747.653916 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.093 3.907 2 N -0.616 5.616 3 C 0.524 3.476 4 O -0.530 6.530 5 C -0.147 4.147 6 C -0.082 4.082 7 H 0.120 0.880 8 C 0.417 3.583 9 O -0.521 6.521 10 O -0.244 6.244 11 C -0.377 4.377 12 H 0.110 0.890 13 C 0.068 3.932 14 N -0.870 5.870 15 Si 0.899 3.101 16 H -0.273 1.273 17 H -0.282 1.282 18 H -0.259 1.259 19 C 0.189 3.811 20 H 0.114 0.886 21 C -0.075 4.075 22 C -0.089 4.089 23 C -0.075 4.075 24 C -0.064 4.064 25 Cl -0.056 7.056 26 C 0.110 3.890 27 F -0.130 7.130 28 C -0.104 4.104 29 H 0.084 0.916 30 H 0.062 0.938 31 H 0.064 0.936 32 H 0.111 0.889 33 H 0.127 0.873 34 H 0.280 0.720 35 H 0.142 0.858 36 H 0.145 0.855 37 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.757 3.008 1.611 15.146 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.048 4.048 2 N -0.350 5.350 3 C 0.312 3.688 4 O -0.406 6.406 5 C -0.187 4.187 6 C -0.102 4.102 7 H 0.138 0.862 8 C 0.261 3.739 9 O -0.415 6.415 10 O -0.153 6.153 11 C -0.453 4.453 12 H 0.128 0.872 13 C -0.136 4.136 14 N -0.508 5.508 15 Si 0.725 3.275 16 H -0.198 1.198 17 H -0.208 1.208 18 H -0.183 1.183 19 C 0.085 3.915 20 H 0.132 0.868 21 C -0.077 4.077 22 C -0.108 4.108 23 C -0.094 4.094 24 C -0.091 4.091 25 Cl -0.027 7.027 26 C 0.090 3.910 27 F -0.108 7.108 28 C -0.124 4.124 29 H 0.103 0.897 30 H 0.081 0.919 31 H 0.083 0.917 32 H 0.130 0.870 33 H 0.145 0.855 34 H 0.090 0.910 35 H 0.160 0.840 36 H 0.162 0.838 37 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -14.817 3.510 1.140 15.270 hybrid contribution 0.125 -0.533 0.239 0.598 sum -14.692 2.976 1.379 15.054 Atomic orbital electron populations 1.21597 0.77603 1.03802 1.01837 1.48227 1.06596 1.06498 1.73702 1.20884 0.89178 0.84222 0.74471 1.90720 1.78595 1.20824 1.50468 1.22458 0.94536 0.94654 1.07081 1.21756 0.91570 0.94456 1.02421 0.86154 1.22016 0.84165 0.82088 0.85637 1.90634 1.60377 1.68273 1.22235 1.83489 1.49225 1.33721 1.48838 1.20609 1.13822 1.06014 1.04825 0.87247 1.24520 0.95055 0.95196 0.98822 1.69601 1.25040 1.17905 1.38302 0.86312 0.78612 0.79562 0.83048 1.19797 1.20756 1.18343 1.20408 0.90047 0.87280 0.93776 0.86838 1.19817 0.99800 0.93621 0.94444 1.20964 0.98478 0.93868 0.97461 1.20891 0.97959 1.00297 0.90218 1.20968 1.08447 0.91616 0.88094 1.98370 1.96839 1.84438 1.23075 1.17230 1.03707 0.86307 0.83748 1.91518 1.93804 1.72585 1.52904 1.20668 1.01148 1.00772 0.89767 0.89729 0.91905 0.91707 0.87030 0.85543 0.90958 0.84008 0.83752 0.84800 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.83 11.14 59.85 0.67 1.50 16 2 N -0.62 -7.18 2.41 -173.97 -0.42 -7.60 16 3 C 0.52 7.32 6.90 -10.86 -0.07 7.25 16 4 O -0.53 -8.95 17.35 5.56 0.10 -8.85 16 5 C -0.15 -2.02 5.88 -26.74 -0.16 -2.18 16 6 C -0.08 -1.16 3.56 -90.13 -0.32 -1.48 16 7 H 0.12 1.41 8.14 -51.93 -0.42 0.99 16 8 C 0.42 8.32 5.52 36.01 0.20 8.52 16 9 O -0.52 -12.02 13.90 -19.05 -0.26 -12.28 16 10 O -0.24 -5.60 8.58 -20.71 -0.18 -5.78 16 11 C -0.38 -10.17 10.10 30.92 0.31 -9.85 16 12 H 0.11 3.35 7.09 -52.49 -0.37 2.97 16 13 C 0.07 1.81 5.49 -17.53 -0.10 1.71 16 14 N -0.87 -24.31 13.96 55.48 0.77 -23.53 16 15 Si 0.90 19.50 28.62 -169.99 -4.86 14.64 16 16 H -0.27 -5.66 7.11 56.52 0.40 -5.26 16 17 H -0.28 -6.06 7.11 56.52 0.40 -5.66 16 18 H -0.26 -5.43 7.11 56.52 0.40 -5.03 16 19 C 0.19 2.29 3.27 -68.12 -0.22 2.07 16 20 H 0.11 1.07 8.06 -51.93 -0.42 0.65 16 21 C -0.08 -1.06 3.38 -104.63 -0.35 -1.42 16 22 C -0.09 -1.24 9.41 -39.58 -0.37 -1.62 16 23 C -0.07 -1.09 9.83 -39.55 -0.39 -1.48 16 24 C -0.06 -1.00 6.33 -39.44 -0.25 -1.25 16 25 Cl -0.06 -0.82 28.62 -51.86 -1.48 -2.31 16 26 C 0.11 1.80 7.28 -39.39 -0.29 1.51 16 27 F -0.13 -2.16 16.84 2.25 0.04 -2.13 16 28 C -0.10 -1.60 8.35 -39.52 -0.33 -1.93 16 29 H 0.08 0.81 7.53 -51.93 -0.39 0.41 16 30 H 0.06 0.52 8.14 -51.93 -0.42 0.10 16 31 H 0.06 0.44 8.14 -51.93 -0.42 0.02 16 32 H 0.11 1.33 8.14 -51.93 -0.42 0.90 16 33 H 0.13 1.97 6.83 -51.93 -0.35 1.61 16 34 H 0.28 7.18 8.31 -40.82 -0.34 6.84 16 35 H 0.14 1.71 8.06 -52.49 -0.42 1.28 16 36 H 0.14 1.82 8.06 -52.49 -0.42 1.39 16 37 H 0.13 2.04 6.41 -52.49 -0.34 1.70 16 LS Contribution 340.93 15.07 5.14 5.14 Total: -1.00 -32.04 340.93 -6.38 -38.42 By element: Atomic # 1 Polarization: 6.48 SS G_CDS: -3.54 Total: 2.93 kcal Atomic # 6 Polarization: 3.03 SS G_CDS: -1.67 Total: 1.36 kcal Atomic # 7 Polarization: -31.49 SS G_CDS: 0.36 Total: -31.13 kcal Atomic # 8 Polarization: -26.57 SS G_CDS: -0.35 Total: -26.92 kcal Atomic # 9 Polarization: -2.16 SS G_CDS: 0.04 Total: -2.13 kcal Atomic # 14 Polarization: 19.50 SS G_CDS: -4.86 Total: 14.64 kcal Atomic # 17 Polarization: -0.82 SS G_CDS: -1.48 Total: -2.31 kcal Total LS contribution 5.14 Total: 5.14 kcal Total: -32.04 -6.38 -38.42 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000758753784.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.614 kcal (2) G-P(sol) polarization free energy of solvation -32.039 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -115.652 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.383 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.422 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.035 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds