Wall clock time and date at job start Tue Mar 31 2020 23:58:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.42903 * 109.46954 * 2 1 4 4 C 1.35913 * 116.99610 * 179.97438 * 3 2 1 5 5 C 1.38787 * 120.01240 * 359.97438 * 4 3 2 6 6 C 1.38189 * 120.09130 * 179.97438 * 5 4 3 7 7 C 1.38246 * 120.11145 * 0.04562 * 6 5 4 8 8 Cl 1.73599 * 119.98916 * 179.97438 * 7 6 5 9 9 C 1.38967 * 120.01836 * 0.02562 * 7 6 5 10 10 N 1.39998 * 120.04412 * 179.97438 * 9 7 6 11 11 C 1.34776 * 120.00189 * 204.50503 * 10 9 7 12 12 O 1.21592 * 119.99549 * 5.62481 * 11 10 9 13 13 N 1.34776 * 120.00262 * 185.63298 * 11 10 9 14 14 C 1.46498 * 120.00127 * 180.02562 * 13 11 10 15 15 C 1.50699 * 109.47160 * 179.97438 * 14 13 11 16 16 O 1.21293 * 120.00141 * 359.97438 * 15 14 13 17 17 N 1.34781 * 119.99946 * 179.97438 * 15 14 13 18 18 C 1.37099 * 119.99969 * 179.97438 * 17 15 14 19 19 H 1.08002 * 120.00030 * 0.02562 * 18 17 15 20 20 C 1.38945 * 119.99883 * 180.02562 * 18 17 15 21 21 N 1.31408 * 120.00397 * 0.02562 * 20 18 17 22 22 Si 1.86799 * 119.99863 * 180.02562 * 20 18 17 23 23 H 1.48505 * 109.47460 * 60.00127 * 22 20 18 24 24 H 1.48498 * 109.47233 * 179.97438 * 22 20 18 25 25 H 1.48504 * 109.47297 * 299.99872 * 22 20 18 26 26 C 1.38601 * 120.00865 * 179.72299 * 4 3 2 27 27 H 1.09000 * 109.47473 * 300.00187 * 1 2 3 28 28 H 1.09004 * 109.46761 * 60.00273 * 1 2 3 29 29 H 1.08997 * 109.47427 * 179.97438 * 1 2 3 30 30 H 1.08997 * 109.47089 * 239.99448 * 2 1 3 31 31 H 1.09004 * 109.46761 * 119.99727 * 2 1 3 32 32 H 1.07997 * 119.95153 * 359.97438 * 5 4 3 33 33 H 1.07999 * 119.94272 * 180.02562 * 6 5 4 34 34 H 0.97005 * 120.00509 * 24.51006 * 10 9 7 35 35 H 0.97002 * 119.99990 * 359.97438 * 13 11 10 36 36 H 1.08998 * 109.46914 * 299.99399 * 14 13 11 37 37 H 1.09002 * 109.47109 * 59.99425 * 14 13 11 38 38 H 0.96994 * 120.00103 * 0.02562 * 17 15 14 39 39 H 0.97000 * 120.00406 * 179.97438 * 21 20 18 40 40 H 1.08000 * 120.05533 * 0.02562 * 26 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 3.3537 1.5253 0.0005 5 6 4.1994 0.4248 0.0016 6 6 5.5696 0.6040 0.0016 7 6 6.1023 1.8797 0.0015 8 17 7.8241 2.1010 0.0022 9 6 5.2598 2.9848 0.0020 10 7 5.7987 4.2770 0.0024 11 6 5.0779 5.3076 0.4869 12 8 4.0029 5.1017 1.0165 13 7 5.5485 6.5663 0.3843 14 6 4.7653 7.6865 0.9115 15 6 5.5085 8.9755 0.6727 16 8 6.5867 8.9600 0.1173 17 7 4.9751 10.1456 1.0764 18 6 5.6515 11.3183 0.8596 19 1 6.6116 11.3045 0.3650 20 6 5.1019 12.5245 1.2762 21 7 3.9341 12.5413 1.8784 22 14 6.0232 14.1223 0.9802 23 1 6.2347 14.3091 -0.4778 24 1 5.2290 15.2579 1.5140 25 1 7.3381 14.0705 1.6685 26 6 3.8837 2.8060 -0.0052 27 1 -0.3634 0.5138 0.8899 28 1 -0.3633 0.5138 -0.8901 29 1 -0.3634 -1.0276 -0.0005 30 1 1.8933 -0.5139 -0.8899 31 1 1.8933 -0.5138 0.8901 32 1 3.7859 -0.5729 0.0024 33 1 6.2254 -0.2541 0.0020 34 1 6.6909 4.4306 -0.3460 35 1 6.4062 6.7305 -0.0379 36 1 3.8001 7.7243 0.4065 37 1 4.6103 7.5496 1.9817 38 1 4.1132 10.1580 1.5209 39 1 3.5506 13.3834 2.1696 40 1 3.2268 3.6632 -0.0097 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000455761598.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 23:58:23 Heat of formation + Delta-G solvation = -81.782461 kcal Electronic energy + Delta-G solvation = -25937.130135 eV Core-core repulsion = 21778.405493 eV Total energy + Delta-G solvation = -4158.724642 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 341.097 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -40.97363 -39.90474 -38.48468 -37.84214 -36.43649 -34.76683 -34.53397 -33.77795 -32.26920 -31.41608 -30.22659 -29.38576 -27.43924 -24.73774 -24.10695 -23.25419 -21.98922 -20.75003 -19.67042 -18.97324 -18.52791 -17.98098 -16.78121 -16.64764 -16.42193 -16.15898 -15.68794 -15.45340 -14.94453 -14.65142 -14.40811 -14.18800 -13.94517 -13.92737 -13.68032 -13.46986 -13.05585 -13.04873 -12.66399 -12.37869 -12.24623 -12.10626 -11.67812 -11.64667 -11.50264 -11.16219 -11.12162 -11.01580 -10.52082 -10.48982 -10.33316 -10.03691 -9.64899 -8.98648 -8.67205 -8.54786 -8.15842 -8.12248 -6.53300 -3.95578 0.94881 1.05471 1.92623 2.41633 2.93222 3.03468 3.12721 3.20803 3.24565 3.52531 3.71421 4.03597 4.21028 4.42876 4.56671 4.65178 4.70204 4.82704 4.84249 4.89169 5.12359 5.15067 5.21805 5.44084 5.51822 5.65426 5.71355 5.83496 5.88707 5.92467 5.96791 6.02080 6.13560 6.55352 6.57626 6.82210 7.15393 7.44066 7.89317 7.93361 8.41691 8.49623 9.02252 9.36390 9.84019 10.63368 Molecular weight = 341.10amu Principal moments of inertia in cm(-1) A = 0.015393 B = 0.002145 C = 0.001897 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1818.584378 B =13048.831640 C =14755.814746 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.053 3.947 3 O -0.308 6.308 4 C 0.160 3.840 5 C -0.226 4.226 6 C -0.046 4.046 7 C -0.114 4.114 8 Cl -0.069 7.069 9 C 0.232 3.768 10 N -0.680 5.680 11 C 0.705 3.295 12 O -0.571 6.571 13 N -0.714 5.714 14 C 0.126 3.874 15 C 0.427 3.573 16 O -0.598 6.598 17 N -0.547 5.547 18 C -0.306 4.306 19 H 0.105 0.895 20 C 0.026 3.974 21 N -0.894 5.894 22 Si 0.934 3.066 23 H -0.272 1.272 24 H -0.283 1.283 25 H -0.272 1.272 26 C -0.159 4.159 27 H 0.068 0.932 28 H 0.067 0.933 29 H 0.078 0.922 30 H 0.063 0.937 31 H 0.063 0.937 32 H 0.135 0.865 33 H 0.138 0.862 34 H 0.413 0.587 35 H 0.410 0.590 36 H 0.086 0.914 37 H 0.086 0.914 38 H 0.396 0.604 39 H 0.275 0.725 40 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.095 -26.382 -3.770 26.732 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.022 4.022 3 O -0.222 6.222 4 C 0.113 3.887 5 C -0.246 4.246 6 C -0.065 4.065 7 C -0.144 4.144 8 Cl -0.040 7.040 9 C 0.133 3.867 10 N -0.327 5.327 11 C 0.405 3.595 12 O -0.449 6.449 13 N -0.371 5.371 14 C -0.001 4.001 15 C 0.212 3.788 16 O -0.485 6.485 17 N -0.182 5.182 18 C -0.435 4.435 19 H 0.123 0.877 20 C -0.177 4.177 21 N -0.534 5.534 22 Si 0.761 3.239 23 H -0.198 1.198 24 H -0.208 1.208 25 H -0.198 1.198 26 C -0.180 4.180 27 H 0.087 0.913 28 H 0.086 0.914 29 H 0.096 0.904 30 H 0.081 0.919 31 H 0.081 0.919 32 H 0.153 0.847 33 H 0.156 0.844 34 H 0.250 0.750 35 H 0.248 0.752 36 H 0.104 0.896 37 H 0.104 0.896 38 H 0.230 0.770 39 H 0.085 0.915 40 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges -2.484 -26.054 -3.569 26.414 hybrid contribution 1.013 0.780 -0.138 1.286 sum -1.470 -25.274 -3.707 25.586 Atomic orbital electron populations 1.21785 0.92608 1.02824 1.03837 1.22830 0.96067 0.81837 1.01446 1.86133 1.18621 1.29357 1.88051 1.18780 0.82584 0.93334 0.93979 1.21101 0.93302 0.98414 1.11821 1.20544 0.94630 0.94818 0.96516 1.20440 0.84316 0.93754 1.15905 1.98356 1.10874 1.97329 1.97441 1.16824 0.91058 0.82575 0.96236 1.42680 1.20294 1.04903 1.64807 1.15791 0.83883 0.80515 0.79331 1.90908 1.21602 1.83643 1.48703 1.44796 1.25373 1.03688 1.63205 1.20877 0.94522 0.84606 1.00144 1.19697 0.88019 0.84888 0.86147 1.90499 1.23059 1.86472 1.48422 1.41772 1.20639 1.04930 1.50818 1.19679 1.04312 0.82727 1.36823 0.87698 1.25332 0.96154 0.99868 0.96332 1.69602 1.16616 1.28482 1.38670 0.85864 0.79080 0.80041 0.78930 1.19761 1.20840 1.19762 1.20602 0.93229 0.96931 1.07262 0.91311 0.91395 0.90363 0.91900 0.91866 0.84749 0.84415 0.75022 0.75219 0.89575 0.89621 0.76972 0.91485 0.81543 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.89 10.28 37.16 0.38 -0.50 16 2 C 0.05 0.38 5.46 37.16 0.20 0.58 16 3 O -0.31 -3.48 10.14 -19.47 -0.20 -3.68 16 4 C 0.16 1.88 6.68 -39.24 -0.26 1.62 16 5 C -0.23 -2.08 9.04 -39.40 -0.36 -2.44 16 6 C -0.05 -0.42 9.82 -39.60 -0.39 -0.81 16 7 C -0.11 -1.26 6.34 -39.31 -0.25 -1.51 16 8 Cl -0.07 -0.69 27.77 -51.86 -1.44 -2.13 16 9 C 0.23 3.01 6.43 -83.66 -0.54 2.47 16 10 N -0.68 -8.91 5.20 -14.21 -0.07 -8.98 16 11 C 0.70 11.23 8.37 -86.92 -0.73 10.50 16 12 O -0.57 -10.56 13.51 5.29 0.07 -10.49 16 13 N -0.71 -11.63 5.53 -66.42 -0.37 -11.99 16 14 C 0.13 2.27 6.15 -5.20 -0.03 2.24 16 15 C 0.43 9.60 7.85 -10.98 -0.09 9.51 16 16 O -0.60 -15.02 15.24 5.55 0.08 -14.93 16 17 N -0.55 -13.37 5.29 -10.96 -0.06 -13.42 16 18 C -0.31 -8.23 9.68 -14.93 -0.14 -8.37 16 19 H 0.11 2.93 7.16 -52.49 -0.38 2.56 16 20 C 0.03 0.68 5.50 -17.47 -0.10 0.58 16 21 N -0.89 -23.67 13.05 55.50 0.72 -22.95 16 22 Si 0.93 20.41 29.55 -169.99 -5.02 15.39 16 23 H -0.27 -5.91 7.11 56.52 0.40 -5.51 16 24 H -0.28 -6.05 7.11 56.52 0.40 -5.65 16 25 H -0.27 -5.91 7.11 56.52 0.40 -5.51 16 26 C -0.16 -2.19 8.65 -39.25 -0.34 -2.53 16 27 H 0.07 0.44 8.14 -51.93 -0.42 0.02 16 28 H 0.07 0.42 8.14 -51.93 -0.42 -0.01 16 29 H 0.08 0.28 8.14 -51.93 -0.42 -0.14 16 30 H 0.06 0.35 7.66 -51.93 -0.40 -0.05 16 31 H 0.06 0.37 7.66 -51.93 -0.40 -0.02 16 32 H 0.13 0.86 6.29 -52.49 -0.33 0.53 16 33 H 0.14 0.92 8.06 -52.49 -0.42 0.50 16 34 H 0.41 4.57 7.76 -40.82 -0.32 4.25 16 35 H 0.41 6.49 7.46 -40.82 -0.30 6.18 16 36 H 0.09 1.47 8.14 -51.93 -0.42 1.05 16 37 H 0.09 1.48 8.14 -51.93 -0.42 1.05 16 38 H 0.40 9.30 7.90 -40.82 -0.32 8.98 16 39 H 0.28 6.90 8.31 -40.82 -0.34 6.57 16 40 H 0.17 2.66 5.79 -52.49 -0.30 2.36 16 LS Contribution 361.59 15.07 5.45 5.45 Total: -1.00 -31.37 361.59 -7.89 -39.26 By element: Atomic # 1 Polarization: 21.57 SS G_CDS: -4.42 Total: 17.15 kcal Atomic # 6 Polarization: 13.97 SS G_CDS: -2.63 Total: 11.33 kcal Atomic # 7 Polarization: -57.57 SS G_CDS: 0.22 Total: -57.35 kcal Atomic # 8 Polarization: -29.06 SS G_CDS: -0.04 Total: -29.10 kcal Atomic # 14 Polarization: 20.41 SS G_CDS: -5.02 Total: 15.39 kcal Atomic # 17 Polarization: -0.69 SS G_CDS: -1.44 Total: -2.13 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -31.37 -7.89 -39.26 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000455761598.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.522 kcal (2) G-P(sol) polarization free energy of solvation -31.375 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.897 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.885 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.260 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.782 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds