Wall clock time and date at job start Tue Mar 31 2020 23:35:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52991 * 1 3 3 H 1.08997 * 109.47446 * 2 1 4 4 O 1.45204 * 109.47041 * 240.00640 * 2 1 3 5 5 C 1.34725 * 117.00376 * 90.00073 * 4 2 1 6 6 O 1.21482 * 119.99878 * 359.97438 * 5 4 2 7 7 C 1.47604 * 120.00495 * 180.02562 * 5 4 2 8 8 C 1.40101 * 120.97044 * 6.37248 * 7 5 4 9 9 C 1.37841 * 119.11005 * 179.72674 * 8 7 5 10 10 N 1.31994 * 121.15885 * 0.56581 * 9 8 7 11 11 C 1.31617 * 122.17754 * 359.71067 * 10 9 8 12 12 Cl 1.73603 * 119.63473 * 179.97438 * 11 10 9 13 13 C 1.39385 * 120.73521 * 359.97438 * 11 10 9 14 14 N 1.38899 * 120.61653 * 180.02562 * 13 11 10 15 15 C 1.50697 * 109.47174 * 120.00610 * 2 1 3 16 16 O 1.21284 * 120.00211 * 105.72759 * 15 2 1 17 17 N 1.34777 * 119.99875 * 285.72646 * 15 2 1 18 18 C 1.46497 * 120.00037 * 4.55532 * 17 15 2 19 19 C 1.46504 * 119.99788 * 184.28361 * 17 15 2 20 20 C 1.50703 * 109.47097 * 270.27512 * 19 17 15 21 21 H 1.08005 * 119.99592 * 359.97438 * 20 19 17 22 22 C 1.37874 * 119.99984 * 180.02562 * 20 19 17 23 23 N 1.31515 * 119.99852 * 359.97438 * 22 20 19 24 24 Si 1.86800 * 119.99829 * 179.97438 * 22 20 19 25 25 H 1.48498 * 109.47110 * 359.97438 * 24 22 20 26 26 H 1.48499 * 109.47017 * 120.00034 * 24 22 20 27 27 H 1.48508 * 109.46830 * 239.99976 * 24 22 20 28 28 H 1.09005 * 109.47722 * 172.78307 * 1 2 3 29 29 H 1.09002 * 109.47259 * 292.78975 * 1 2 3 30 30 H 1.09004 * 109.47500 * 52.78524 * 1 2 3 31 31 H 1.07997 * 120.44688 * 0.02562 * 8 7 5 32 32 H 1.08003 * 119.42443 * 180.27297 * 9 8 7 33 33 H 0.96996 * 119.99902 * 186.67796 * 14 13 11 34 34 H 0.96998 * 120.00066 * 6.67749 * 14 13 11 35 35 H 1.08998 * 109.47219 * 268.16325 * 18 17 15 36 36 H 1.09008 * 109.47009 * 28.16076 * 18 17 15 37 37 H 1.09003 * 109.46812 * 148.15762 * 18 17 15 38 38 H 1.08996 * 109.46934 * 30.27378 * 19 17 15 39 39 H 1.08999 * 109.46782 * 150.27354 * 19 17 15 40 40 H 0.97006 * 119.99470 * 179.97438 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 8 2.0139 -0.6844 -1.1857 5 6 2.2178 0.0669 -2.2852 6 8 1.9969 1.2611 -2.2545 7 6 2.7086 -0.5610 -3.5276 8 6 2.8432 -1.9519 -3.6281 9 6 3.2998 -2.4979 -4.8085 10 7 3.6206 -1.7334 -5.8355 11 6 3.5183 -0.4219 -5.7921 12 17 3.9594 0.5200 -7.1820 13 6 3.0596 0.2191 -4.6425 14 7 2.9521 1.6033 -4.5996 15 6 2.0323 -0.7105 1.2304 16 8 2.5028 -1.8245 1.1377 17 7 1.9586 -0.1080 2.4337 18 6 1.3004 1.1945 2.5617 19 6 2.5315 -0.7585 3.6148 20 6 1.4883 -1.6319 4.2629 21 1 0.4975 -1.6957 3.8378 22 6 1.7984 -2.3486 5.3992 23 7 3.0047 -2.2705 5.9171 24 14 0.5051 -3.4307 6.2029 25 1 -0.7611 -3.3447 5.4317 26 1 0.9791 -4.8378 6.2218 27 1 0.2688 -2.9691 7.5945 28 1 -0.3635 -1.0195 -0.1291 29 1 -0.3634 0.3981 0.9474 30 1 -0.3634 0.6215 -0.8184 31 1 2.5880 -2.5880 -2.7935 32 1 3.4012 -3.5698 -4.8930 33 1 2.7254 2.0465 -3.7671 34 1 3.1036 2.1266 -5.4021 35 1 2.0389 1.9877 2.4452 36 1 0.5366 1.2930 1.7902 37 1 0.8360 1.2718 3.5448 38 1 3.3826 -1.3702 3.3157 39 1 2.8611 0.0009 4.3238 40 1 3.2227 -2.7746 6.7167 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000768569730.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 23:35:10 Heat of formation + Delta-G solvation = -74.334787 kcal Electronic energy + Delta-G solvation = -27004.247149 eV Core-core repulsion = 22845.845463 eV Total energy + Delta-G solvation = -4158.401687 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 341.097 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -41.34092 -40.19214 -38.96672 -37.03259 -36.87823 -35.38304 -34.97831 -33.12950 -32.65234 -31.51780 -29.54462 -27.79476 -26.32247 -25.75203 -24.33959 -23.49509 -22.66834 -21.37844 -19.05432 -18.78542 -17.96884 -17.46304 -17.18232 -16.61154 -16.44873 -16.19930 -15.68032 -15.33321 -15.11576 -14.99306 -14.64814 -14.55975 -14.32096 -13.77292 -13.30633 -13.03212 -12.71803 -12.56231 -12.28858 -12.14570 -12.09822 -11.91309 -11.74835 -11.69480 -11.46384 -11.27456 -11.12360 -10.94158 -10.85181 -10.63737 -10.21311 -10.05726 -9.97958 -9.68564 -9.00742 -8.49645 -8.21675 -7.79851 -6.10331 -4.15293 0.17777 0.75410 1.38603 2.16004 2.25271 3.14410 3.22143 3.26413 3.33247 3.34474 3.38161 3.72588 4.18523 4.19044 4.32701 4.39348 4.67922 4.71286 4.85422 4.93112 4.98536 5.20018 5.24666 5.35016 5.52050 5.54201 5.63043 5.80246 5.95919 6.00109 6.12676 6.18453 6.70463 6.90787 7.23101 7.31714 7.36692 7.38926 7.46064 7.85250 8.14424 8.21151 8.77206 8.92508 9.49894 10.97936 Molecular weight = 341.10amu Principal moments of inertia in cm(-1) A = 0.023643 B = 0.002314 C = 0.002208 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1183.992212 B =12097.078497 C =12680.683391 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C 0.072 3.928 3 H 0.106 0.894 4 O -0.313 6.313 5 C 0.526 3.474 6 O -0.517 6.517 7 C -0.167 4.167 8 C -0.048 4.048 9 C 0.038 3.962 10 N -0.410 5.410 11 C 0.088 3.912 12 Cl -0.029 7.029 13 C 0.255 3.745 14 N -0.836 5.836 15 C 0.507 3.493 16 O -0.516 6.516 17 N -0.595 5.595 18 C 0.066 3.934 19 C 0.247 3.753 20 C -0.527 4.527 21 H 0.059 0.941 22 C 0.061 3.939 23 N -0.894 5.894 24 Si 0.899 3.101 25 H -0.273 1.273 26 H -0.282 1.282 27 H -0.283 1.283 28 H 0.076 0.924 29 H 0.093 0.907 30 H 0.070 0.930 31 H 0.163 0.837 32 H 0.174 0.826 33 H 0.421 0.579 34 H 0.403 0.597 35 H 0.048 0.952 36 H 0.066 0.934 37 H 0.079 0.921 38 H 0.044 0.956 39 H 0.036 0.964 40 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.078 8.659 -21.819 23.566 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C 0.014 3.986 3 H 0.123 0.877 4 O -0.227 6.227 5 C 0.372 3.628 6 O -0.407 6.407 7 C -0.181 4.181 8 C -0.068 4.068 9 C -0.119 4.119 10 N -0.120 5.120 11 C -0.086 4.086 12 Cl -0.001 7.001 13 C 0.138 3.862 14 N -0.381 5.381 15 C 0.291 3.709 16 O -0.391 6.391 17 N -0.329 5.329 18 C -0.077 4.077 19 C 0.128 3.872 20 C -0.565 4.565 21 H 0.077 0.923 22 C -0.141 4.141 23 N -0.533 5.533 24 Si 0.727 3.273 25 H -0.198 1.198 26 H -0.208 1.208 27 H -0.210 1.210 28 H 0.095 0.905 29 H 0.111 0.889 30 H 0.089 0.911 31 H 0.181 0.819 32 H 0.191 0.809 33 H 0.262 0.738 34 H 0.233 0.767 35 H 0.067 0.933 36 H 0.084 0.916 37 H 0.098 0.902 38 H 0.062 0.938 39 H 0.054 0.946 40 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -1.463 8.061 -22.431 23.880 hybrid contribution -0.979 0.417 1.200 1.604 sum -2.442 8.478 -21.230 22.991 Atomic orbital electron populations 1.22320 0.92044 1.04367 1.04147 1.22752 0.96102 0.97455 0.82328 0.87651 1.86664 1.76219 1.40616 1.19222 1.20694 0.73728 0.84653 0.83702 1.90543 1.50152 1.16079 1.83932 1.18726 1.13261 0.94071 0.92064 1.22556 0.91412 0.93381 0.99470 1.22361 1.01642 1.00063 0.87829 1.66619 1.10557 1.03820 1.31051 1.20881 1.08673 0.90004 0.89001 1.98384 1.91512 1.69238 1.40948 1.18160 0.90588 0.85992 0.91437 1.43265 1.74823 1.02707 1.17302 1.19717 0.80783 0.86638 0.83750 1.90716 1.44723 1.18180 1.85484 1.48086 1.56458 1.19839 1.08479 1.21988 0.97084 0.85049 1.03604 1.19371 0.94737 0.92943 0.80139 1.21432 0.98108 1.26941 1.10059 0.92298 1.24943 0.95628 0.96634 0.96929 1.69941 1.19229 1.42044 1.22088 0.86424 0.81535 0.80418 0.78929 1.19783 1.20811 1.20958 0.90456 0.88883 0.91129 0.81934 0.80944 0.73806 0.76651 0.93339 0.91592 0.90182 0.93776 0.94559 0.92685 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.17 9.15 37.15 0.34 -1.83 16 2 C 0.07 1.10 2.17 -27.89 -0.06 1.04 16 3 H 0.11 1.45 6.71 -51.93 -0.35 1.11 16 4 O -0.31 -4.78 8.83 -47.12 -0.42 -5.19 16 5 C 0.53 6.99 7.87 34.55 0.27 7.26 16 6 O -0.52 -6.86 13.09 -19.25 -0.25 -7.11 16 7 C -0.17 -1.94 5.92 -104.52 -0.62 -2.56 16 8 C -0.05 -0.49 9.69 -39.03 -0.38 -0.86 16 9 C 0.04 0.35 11.15 -17.63 -0.20 0.16 16 10 N -0.41 -4.54 10.30 -10.24 -0.11 -4.65 16 11 C 0.09 0.94 7.30 -17.22 -0.13 0.82 16 12 Cl -0.03 -0.26 27.78 -51.86 -1.44 -1.70 16 13 C 0.26 2.74 6.80 -83.37 -0.57 2.17 16 14 N -0.84 -7.49 8.85 32.67 0.29 -7.20 16 15 C 0.51 10.31 7.00 -10.99 -0.08 10.23 16 16 O -0.52 -12.79 16.19 -13.66 -0.22 -13.01 16 17 N -0.59 -12.11 2.86 -182.95 -0.52 -12.63 16 18 C 0.07 0.98 9.87 59.85 0.59 1.57 16 19 C 0.25 6.25 5.13 -5.19 -0.03 6.23 16 20 C -0.53 -14.50 9.38 -34.44 -0.32 -14.83 16 21 H 0.06 1.62 7.81 -52.48 -0.41 1.21 16 22 C 0.06 1.70 5.46 -17.82 -0.10 1.60 16 23 N -0.89 -26.06 13.29 55.43 0.74 -25.32 16 24 Si 0.90 21.41 29.54 -169.99 -5.02 16.39 16 25 H -0.27 -6.40 7.11 56.52 0.40 -6.00 16 26 H -0.28 -6.74 7.11 56.52 0.40 -6.34 16 27 H -0.28 -6.59 7.11 56.52 0.40 -6.18 16 28 H 0.08 1.03 8.14 -51.93 -0.42 0.60 16 29 H 0.09 1.10 5.51 -51.93 -0.29 0.81 16 30 H 0.07 0.76 8.14 -51.93 -0.42 0.34 16 31 H 0.16 1.54 7.73 -52.49 -0.41 1.14 16 32 H 0.17 1.11 8.06 -52.48 -0.42 0.69 16 33 H 0.42 4.08 5.62 -40.82 -0.23 3.85 16 34 H 0.40 2.77 7.55 -40.82 -0.31 2.47 16 35 H 0.05 0.62 8.14 -51.93 -0.42 0.20 16 36 H 0.07 0.79 4.20 -51.92 -0.22 0.57 16 37 H 0.08 1.20 8.08 -51.93 -0.42 0.78 16 38 H 0.04 1.26 7.49 -51.93 -0.39 0.87 16 39 H 0.04 0.92 8.07 -51.93 -0.42 0.50 16 40 H 0.26 7.23 8.31 -40.82 -0.34 6.89 16 LS Contribution 358.52 15.07 5.40 5.40 Total: -1.00 -33.43 358.52 -7.08 -40.50 By element: Atomic # 1 Polarization: 7.77 SS G_CDS: -4.26 Total: 3.51 kcal Atomic # 6 Polarization: 12.27 SS G_CDS: -1.27 Total: 11.00 kcal Atomic # 7 Polarization: -50.20 SS G_CDS: 0.40 Total: -49.80 kcal Atomic # 8 Polarization: -24.42 SS G_CDS: -0.89 Total: -25.31 kcal Atomic # 14 Polarization: 21.41 SS G_CDS: -5.02 Total: 16.39 kcal Atomic # 17 Polarization: -0.26 SS G_CDS: -1.44 Total: -1.70 kcal Total LS contribution 5.40 Total: 5.40 kcal Total: -33.43 -7.08 -40.50 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000768569730.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.831 kcal (2) G-P(sol) polarization free energy of solvation -33.425 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.256 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.079 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.504 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.335 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds