Wall clock time and date at job start Tue Mar 31 2020 23:36:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 H 1.09004 * 109.47179 * 2 1 4 4 O 1.42900 * 109.47247 * 239.99855 * 2 1 3 5 5 C 1.35898 * 117.00048 * 84.83019 * 4 2 1 6 6 C 1.38755 * 120.05007 * 354.62573 * 5 4 2 7 7 C 1.38131 * 119.97223 * 180.02562 * 6 5 4 8 8 C 1.38271 * 120.06503 * 0.26062 * 7 6 5 9 9 C 1.38361 * 120.09824 * 359.48238 * 8 7 6 10 10 Cl 1.73600 * 119.98721 * 180.27714 * 9 8 7 11 11 C 1.38284 * 120.02922 * 0.51705 * 9 8 7 12 12 C 1.50694 * 109.46640 * 119.99651 * 2 1 3 13 13 O 1.21288 * 119.99757 * 120.00210 * 12 2 1 14 14 N 1.34776 * 120.00330 * 299.99720 * 12 2 1 15 15 N 1.40108 * 119.99848 * 180.02562 * 14 12 2 16 16 C 1.34774 * 119.99624 * 180.02562 * 15 14 12 17 17 O 1.21587 * 119.99938 * 179.97438 * 16 15 14 18 18 N 1.34778 * 119.99908 * 359.97438 * 16 15 14 19 19 C 1.46504 * 119.99638 * 180.02562 * 18 16 15 20 20 C 1.50701 * 109.46948 * 179.97438 * 19 18 16 21 21 H 1.07996 * 120.00225 * 0.02562 * 20 19 18 22 22 C 1.37876 * 119.99810 * 179.97438 * 20 19 18 23 23 N 1.31511 * 120.00481 * 0.02562 * 22 20 19 24 24 Si 1.86806 * 119.99888 * 180.02562 * 22 20 19 25 25 H 1.48497 * 109.47137 * 90.00064 * 24 22 20 26 26 H 1.48500 * 109.47241 * 210.00198 * 24 22 20 27 27 H 1.48500 * 109.46923 * 330.00239 * 24 22 20 28 28 H 1.09008 * 109.46793 * 60.00145 * 1 2 3 29 29 H 1.08996 * 109.47324 * 179.97438 * 1 2 3 30 30 H 1.08999 * 109.47170 * 300.00436 * 1 2 3 31 31 H 1.08000 * 120.01576 * 0.02562 * 6 5 4 32 32 H 1.07996 * 119.97070 * 179.97438 * 7 6 5 33 33 H 1.07994 * 119.94794 * 179.72083 * 8 7 6 34 34 H 1.07999 * 120.03137 * 179.76615 * 11 9 8 35 35 H 0.96998 * 119.99902 * 0.02562 * 14 12 2 36 36 H 0.96994 * 120.00008 * 0.02562 * 15 14 12 37 37 H 0.97003 * 120.00253 * 359.97438 * 18 16 15 38 38 H 1.08997 * 109.47104 * 299.99631 * 19 18 16 39 39 H 1.09002 * 109.47189 * 60.00008 * 19 18 16 40 40 H 0.97002 * 120.00459 * 179.97438 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 8 2.0064 -0.6737 -1.1667 5 6 2.1092 0.0616 -2.3050 6 6 1.6548 1.3725 -2.3288 7 6 1.7596 2.1182 -3.4867 8 6 2.3120 1.5581 -4.6239 9 6 2.7708 0.2529 -4.6018 10 17 3.4703 -0.4452 -6.0290 11 6 2.6679 -0.4973 -3.4447 12 6 2.0322 -0.7103 1.2305 13 8 2.7295 -1.6965 1.1193 14 7 1.7066 -0.2498 2.4546 15 7 2.1741 -0.9100 3.5986 16 6 1.8480 -0.4497 4.8226 17 8 2.2532 -1.0229 5.8154 18 7 1.0728 0.6458 4.9461 19 6 0.7189 1.1464 6.2767 20 6 -0.1474 2.3718 6.1384 21 1 -0.4086 2.7405 5.1575 22 6 -0.6074 3.0215 7.2641 23 7 -0.2898 2.5723 8.4586 24 14 -1.6818 4.5400 7.0926 25 1 -3.1094 4.1337 7.0470 26 1 -1.4595 5.4375 8.2547 27 1 -1.3306 5.2559 5.8399 28 1 -0.3633 0.5139 -0.8901 29 1 -0.3634 -1.0276 -0.0005 30 1 -0.3633 0.5139 0.8899 31 1 1.2194 1.8095 -1.4423 32 1 1.4056 3.1384 -3.5054 33 1 2.3889 2.1414 -5.5294 34 1 3.0225 -1.5173 -3.4285 35 1 1.1487 0.5387 2.5435 36 1 2.7322 -1.6982 3.5096 37 1 0.7499 1.1033 4.1541 38 1 0.1742 0.3756 6.8219 39 1 1.6273 1.4037 6.8216 40 1 -0.6131 3.0296 9.2506 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000787354502.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 23:36:56 Heat of formation + Delta-G solvation = -42.454520 kcal Electronic energy + Delta-G solvation = -26020.566013 eV Core-core repulsion = 21863.546758 eV Total energy + Delta-G solvation = -4157.019255 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 341.097 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -41.18185 -40.15771 -39.05194 -37.98803 -36.70103 -35.59249 -34.40686 -33.16949 -32.37182 -31.28838 -30.43692 -29.94223 -27.23894 -25.28127 -23.45794 -23.08233 -22.88922 -21.05447 -20.56545 -19.21985 -18.98550 -17.74834 -17.06489 -16.57974 -16.32431 -16.20214 -15.80098 -15.39034 -15.23735 -15.05999 -14.78042 -14.55253 -14.28895 -14.11449 -13.81550 -13.64195 -13.28844 -13.00569 -12.62490 -12.30201 -12.28279 -12.11110 -12.07582 -11.61709 -11.42092 -11.33573 -11.24410 -11.09121 -10.96753 -10.50462 -10.28687 -9.80705 -9.51706 -9.35376 -8.89801 -8.76699 -8.45884 -7.96666 -6.26732 -4.34869 0.61536 0.83379 1.43938 1.71045 2.12467 2.77789 3.12649 3.16535 3.22248 3.24841 3.54836 3.59619 3.89860 4.15267 4.24656 4.28605 4.33227 4.50090 4.60092 4.69666 4.91290 5.03738 5.08914 5.09686 5.16086 5.32446 5.57711 5.64931 5.76676 5.82408 5.98620 6.33088 6.56155 6.80916 7.17064 7.26894 7.33023 7.40464 7.51197 7.81088 7.94627 8.54523 8.71187 8.96949 9.31881 10.83227 Molecular weight = 341.10amu Principal moments of inertia in cm(-1) A = 0.015941 B = 0.002033 C = 0.001833 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1756.064536 B =13769.418813 C =15271.672717 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.183 4.183 2 C 0.078 3.922 3 H 0.109 0.891 4 O -0.279 6.279 5 C 0.146 3.854 6 C -0.208 4.208 7 C -0.064 4.064 8 C -0.149 4.149 9 C 0.004 3.996 10 Cl -0.062 7.062 11 C -0.142 4.142 12 C 0.517 3.483 13 O -0.514 6.514 14 N -0.517 5.517 15 N -0.540 5.540 16 C 0.702 3.298 17 O -0.574 6.574 18 N -0.724 5.724 19 C 0.263 3.737 20 C -0.547 4.547 21 H 0.062 0.938 22 C 0.065 3.935 23 N -0.882 5.882 24 Si 0.905 3.095 25 H -0.278 1.278 26 H -0.284 1.284 27 H -0.273 1.273 28 H 0.081 0.919 29 H 0.081 0.919 30 H 0.086 0.914 31 H 0.139 0.861 32 H 0.138 0.862 33 H 0.135 0.865 34 H 0.144 0.856 35 H 0.423 0.577 36 H 0.436 0.564 37 H 0.380 0.620 38 H 0.029 0.971 39 H 0.029 0.971 40 H 0.267 0.733 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.860 -0.031 -27.960 28.022 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.240 4.240 2 C 0.016 3.984 3 H 0.126 0.874 4 O -0.191 6.191 5 C 0.100 3.900 6 C -0.227 4.227 7 C -0.083 4.083 8 C -0.168 4.168 9 C -0.023 4.023 10 Cl -0.033 7.033 11 C -0.161 4.161 12 C 0.300 3.700 13 O -0.387 6.387 14 N -0.269 5.269 15 N -0.300 5.300 16 C 0.401 3.599 17 O -0.448 6.448 18 N -0.378 5.378 19 C 0.143 3.857 20 C -0.585 4.585 21 H 0.081 0.919 22 C -0.139 4.139 23 N -0.519 5.519 24 Si 0.732 3.268 25 H -0.204 1.204 26 H -0.210 1.210 27 H -0.198 1.198 28 H 0.100 0.900 29 H 0.100 0.900 30 H 0.105 0.895 31 H 0.157 0.843 32 H 0.155 0.845 33 H 0.153 0.847 34 H 0.162 0.838 35 H 0.265 0.735 36 H 0.281 0.719 37 H 0.213 0.787 38 H 0.047 0.953 39 H 0.047 0.953 40 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges 2.643 -1.256 -27.042 27.200 hybrid contribution -0.814 1.271 -0.443 1.573 sum 1.829 0.015 -27.485 27.546 Atomic orbital electron populations 1.22451 0.91729 1.05204 1.04626 1.22053 0.96119 0.96957 0.83223 0.87396 1.86205 1.80837 1.36648 1.15385 1.18772 0.94723 0.90156 0.86330 1.21471 1.06429 0.94085 1.00679 1.20931 0.96200 0.99792 0.91347 1.21001 1.02091 0.93768 0.99962 1.20575 0.99519 0.93905 0.88252 1.98390 1.82643 1.84452 1.37805 1.20227 1.04132 1.01854 0.89915 1.20054 0.81619 0.85632 0.82666 1.90788 1.36867 1.25324 1.85707 1.44592 1.53240 1.30388 0.98712 1.44866 1.57732 1.32427 0.94969 1.16001 0.80497 0.82198 0.81202 1.91001 1.60020 1.60877 1.32892 1.45808 1.52239 1.27597 1.12177 1.19118 0.96045 0.93958 0.76606 1.21144 1.32673 1.11481 0.93188 0.91940 1.24945 0.96208 0.97837 0.94950 1.69964 1.44116 1.40126 0.97668 0.86395 0.80451 0.82057 0.77861 1.20425 1.20953 1.19773 0.90009 0.90047 0.89546 0.84310 0.84459 0.84690 0.83840 0.73542 0.71855 0.78681 0.95253 0.95263 0.92288 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -1.09 9.07 37.16 0.34 -0.76 16 2 C 0.08 0.63 2.65 -27.88 -0.07 0.56 16 3 H 0.11 0.60 6.32 -51.93 -0.33 0.27 16 4 O -0.28 -2.91 9.33 -39.33 -0.37 -3.27 16 5 C 0.15 1.30 6.60 -39.22 -0.26 1.05 16 6 C -0.21 -1.39 8.24 -39.43 -0.32 -1.71 16 7 C -0.06 -0.38 10.04 -39.61 -0.40 -0.77 16 8 C -0.15 -0.99 9.83 -39.52 -0.39 -1.38 16 9 C 0.00 0.03 6.32 -39.52 -0.25 -0.22 16 10 Cl -0.06 -0.48 28.95 -51.86 -1.50 -1.98 16 11 C -0.14 -1.27 9.77 -39.40 -0.38 -1.66 16 12 C 0.52 6.03 7.35 -10.99 -0.08 5.95 16 13 O -0.51 -8.13 16.34 -14.36 -0.23 -8.36 16 14 N -0.52 -5.88 6.15 31.22 0.19 -5.69 16 15 N -0.54 -8.20 6.26 27.63 0.17 -8.03 16 16 C 0.70 13.60 8.68 -86.92 -0.75 12.84 16 17 O -0.57 -13.67 17.18 5.29 0.09 -13.58 16 18 N -0.72 -13.93 5.51 -66.41 -0.37 -14.29 16 19 C 0.26 6.54 5.43 -5.19 -0.03 6.52 16 20 C -0.55 -13.76 9.28 -34.44 -0.32 -14.08 16 21 H 0.06 1.43 7.60 -52.49 -0.40 1.03 16 22 C 0.07 1.70 5.46 -17.82 -0.10 1.61 16 23 N -0.88 -24.83 13.29 55.43 0.74 -24.09 16 24 Si 0.91 19.62 29.54 -169.99 -5.02 14.60 16 25 H -0.28 -5.98 7.11 56.52 0.40 -5.57 16 26 H -0.28 -6.20 7.11 56.52 0.40 -5.80 16 27 H -0.27 -5.68 7.11 56.52 0.40 -5.28 16 28 H 0.08 0.39 6.90 -51.92 -0.36 0.03 16 29 H 0.08 0.58 8.14 -51.93 -0.42 0.16 16 30 H 0.09 0.38 7.56 -51.93 -0.39 -0.02 16 31 H 0.14 0.63 5.43 -52.49 -0.28 0.34 16 32 H 0.14 0.46 8.06 -52.49 -0.42 0.04 16 33 H 0.14 0.66 8.06 -52.49 -0.42 0.24 16 34 H 0.14 1.26 8.06 -52.49 -0.42 0.84 16 35 H 0.42 3.70 6.12 -182.59 -1.12 2.58 16 36 H 0.44 6.65 8.10 -182.60 -1.48 5.17 16 37 H 0.38 5.85 6.24 -40.82 -0.25 5.59 16 38 H 0.03 0.81 8.14 -51.93 -0.42 0.39 16 39 H 0.03 0.81 8.14 -51.93 -0.42 0.39 16 40 H 0.27 7.07 8.31 -40.82 -0.34 6.74 16 LS Contribution 363.73 15.07 5.48 5.48 Total: -1.00 -34.02 363.73 -10.12 -44.14 By element: Atomic # 1 Polarization: 13.41 SS G_CDS: -6.29 Total: 7.13 kcal Atomic # 6 Polarization: 10.97 SS G_CDS: -3.02 Total: 7.95 kcal Atomic # 7 Polarization: -52.84 SS G_CDS: 0.74 Total: -52.10 kcal Atomic # 8 Polarization: -24.71 SS G_CDS: -0.51 Total: -25.22 kcal Atomic # 14 Polarization: 19.62 SS G_CDS: -5.02 Total: 14.60 kcal Atomic # 17 Polarization: -0.48 SS G_CDS: -1.50 Total: -1.98 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -34.02 -10.12 -44.14 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000787354502.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.687 kcal (2) G-P(sol) polarization free energy of solvation -34.019 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.332 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.122 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.141 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.455 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds