Wall clock time and date at job start Tue Mar 31 2020 23:22:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42908 * 114.00097 * 2 1 4 4 C 1.52991 * 109.47273 * 180.02562 * 3 2 1 5 5 N 1.46502 * 109.47602 * 64.99749 * 4 3 2 6 6 C 1.46496 * 119.99943 * 268.25812 * 5 4 3 7 7 C 1.50704 * 109.46977 * 268.91103 * 6 5 4 8 8 H 1.08006 * 119.99922 * 0.02562 * 7 6 5 9 9 C 1.37879 * 120.00127 * 179.97438 * 7 6 5 10 10 N 1.31509 * 120.00017 * 180.02562 * 9 7 6 11 11 Si 1.86806 * 119.99929 * 0.02562 * 9 7 6 12 12 H 1.48499 * 109.47096 * 89.99591 * 11 9 7 13 13 H 1.48499 * 109.46844 * 209.99824 * 11 9 7 14 14 H 1.48494 * 109.46775 * 329.99727 * 11 9 7 15 15 C 1.34771 * 120.00040 * 88.24973 * 5 4 3 16 16 O 1.21282 * 120.00129 * 4.40583 * 15 5 4 17 17 C 1.50704 * 120.00275 * 184.39889 * 15 5 4 18 18 H 1.08997 * 109.46886 * 317.58967 * 17 15 5 19 19 C 1.53003 * 109.46859 * 77.58593 * 17 15 5 20 20 O 1.42896 * 109.47452 * 197.58717 * 17 15 5 21 21 C 1.35894 * 117.00321 * 155.44121 * 20 17 15 22 22 C 1.38763 * 120.04578 * 3.12225 * 21 20 17 23 23 C 1.38133 * 119.96923 * 180.02562 * 22 21 20 24 24 C 1.38269 * 120.06851 * 0.26297 * 23 22 21 25 25 C 1.38357 * 120.09689 * 359.48399 * 24 23 22 26 26 Cl 1.73599 * 119.98562 * 180.27962 * 25 24 23 27 27 C 1.38286 * 120.03157 * 0.51344 * 25 24 23 28 28 H 1.09008 * 109.46783 * 60.00360 * 1 2 3 29 29 H 1.08995 * 109.46974 * 180.02562 * 1 2 3 30 30 H 1.09000 * 109.47113 * 300.00573 * 1 2 3 31 31 H 1.08995 * 109.47346 * 59.99439 * 3 2 1 32 32 H 1.09002 * 109.46645 * 299.99727 * 3 2 1 33 33 H 1.08998 * 109.47400 * 304.99548 * 4 3 2 34 34 H 1.09003 * 109.47306 * 185.00146 * 4 3 2 35 35 H 1.09001 * 109.47485 * 28.90931 * 6 5 4 36 36 H 1.09005 * 109.47302 * 148.91251 * 6 5 4 37 37 H 0.97004 * 119.99960 * 180.02562 * 10 9 7 38 38 H 1.09000 * 109.46638 * 56.75058 * 19 17 15 39 39 H 1.08994 * 109.46977 * 176.74734 * 19 17 15 40 40 H 1.08998 * 109.47414 * 296.75426 * 19 17 15 41 41 H 1.08002 * 120.01693 * 0.02562 * 22 21 20 42 42 H 1.08005 * 119.96598 * 179.97438 * 23 22 21 43 43 H 1.08003 * 119.94822 * 179.72132 * 24 23 22 44 44 H 1.07994 * 120.03744 * 179.76573 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 6 3.5354 1.1847 -0.0006 5 7 3.9757 0.5644 -1.2527 6 6 4.1420 -0.8889 -1.3312 7 6 5.5602 -1.2523 -0.9737 8 1 6.2669 -0.4780 -0.7135 9 6 5.9554 -2.5732 -0.9777 10 7 7.1929 -2.8903 -0.6652 11 14 4.7330 -3.9125 -1.4270 12 1 4.7782 -4.1528 -2.8917 13 1 5.0840 -5.1640 -0.7089 14 1 3.3653 -3.4851 -1.0374 15 6 4.2276 1.3309 -2.3323 16 8 4.1674 2.5391 -2.2456 17 6 4.5843 0.6866 -3.6472 18 1 5.2813 -0.1330 -3.4729 19 6 3.3162 0.1453 -4.3104 20 8 5.1929 1.6557 -4.5029 21 6 6.0188 1.1880 -5.4755 22 6 6.1884 -0.1787 -5.6450 23 6 7.0286 -0.6524 -6.6338 24 6 7.7052 0.2341 -7.4513 25 6 7.5342 1.5973 -7.2881 26 17 8.3795 2.7075 -8.3209 27 6 6.6939 2.0760 -6.2996 28 1 -0.3633 0.5138 -0.8901 29 1 -0.3633 -1.0276 0.0005 30 1 -0.3633 0.5139 0.8899 31 1 1.6886 1.8465 0.8899 32 1 1.6886 1.8464 -0.8900 33 1 3.8514 0.5684 0.8409 34 1 3.9785 2.1766 0.0889 35 1 3.4567 -1.3713 -0.6343 36 1 3.9254 -1.2252 -2.3453 37 1 7.4710 -3.8196 -0.6683 38 1 2.5961 0.9545 -4.4321 39 1 3.5656 -0.2690 -5.2872 40 1 2.8834 -0.6350 -3.6844 41 1 5.6636 -0.8719 -5.0042 42 1 7.1609 -1.7162 -6.7654 43 1 8.3652 -0.1384 -8.2208 44 1 6.5633 3.1401 -6.1697 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000071140985.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 23:22:44 Heat of formation + Delta-G solvation = -91.357777 kcal Electronic energy + Delta-G solvation = -28219.151162 eV Core-core repulsion = 24163.551647 eV Total energy + Delta-G solvation = -4055.599516 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 341.123 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -40.47719 -39.24575 -37.78695 -37.25792 -36.23268 -35.16264 -32.69075 -32.21853 -30.67861 -29.90482 -29.49797 -27.70610 -26.17736 -24.60118 -23.08226 -22.68420 -22.56805 -21.44064 -18.71482 -18.32019 -17.14002 -16.78008 -16.39579 -16.01191 -15.90221 -15.68018 -15.40433 -15.11553 -14.78371 -14.60833 -14.22787 -14.19392 -13.63856 -13.51168 -13.07165 -12.98274 -12.66011 -12.44379 -12.33124 -12.16019 -11.85475 -11.77852 -11.68307 -11.63988 -11.44708 -11.15052 -11.05664 -10.93412 -10.82761 -10.65878 -10.55397 -10.30501 -9.68046 -9.57038 -9.15595 -8.83975 -8.77174 -8.16488 -7.88622 -6.26547 -4.29348 1.15858 1.38688 1.99925 2.91281 3.11305 3.16689 3.23701 3.25214 3.67817 3.91126 4.01851 4.21904 4.76419 4.89906 5.04332 5.04744 5.08630 5.14288 5.23631 5.28849 5.33334 5.35020 5.46469 5.49738 5.50653 5.56255 5.68072 5.69947 5.77330 5.87462 5.94152 6.10538 6.17675 6.23453 6.32986 6.40523 6.42210 6.57101 6.70930 7.17864 7.29402 7.39238 7.48398 7.98374 8.32218 8.68895 8.81013 9.31862 10.85720 Molecular weight = 341.12amu Principal moments of inertia in cm(-1) A = 0.010995 B = 0.003673 C = 0.003040 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2545.966551 B = 7621.694494 C = 9209.171214 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.380 6.380 3 C 0.046 3.954 4 C 0.123 3.877 5 N -0.577 5.577 6 C 0.205 3.795 7 C -0.548 4.548 8 H 0.078 0.922 9 C 0.079 3.921 10 N -0.887 5.887 11 Si 0.864 3.136 12 H -0.273 1.273 13 H -0.282 1.282 14 H -0.259 1.259 15 C 0.527 3.473 16 O -0.550 6.550 17 C 0.063 3.937 18 H 0.119 0.881 19 C -0.174 4.174 20 O -0.284 6.284 21 C 0.153 3.847 22 C -0.201 4.201 23 C -0.064 4.064 24 C -0.155 4.155 25 C 0.003 3.997 26 Cl -0.072 7.072 27 C -0.148 4.148 28 H 0.036 0.964 29 H 0.082 0.918 30 H 0.037 0.963 31 H 0.054 0.946 32 H 0.049 0.951 33 H 0.093 0.907 34 H 0.092 0.908 35 H 0.051 0.949 36 H 0.027 0.973 37 H 0.267 0.733 38 H 0.068 0.932 39 H 0.072 0.928 40 H 0.085 0.915 41 H 0.142 0.858 42 H 0.135 0.865 43 H 0.132 0.868 44 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.249 4.237 -8.939 12.264 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.299 6.299 3 C -0.031 4.031 4 C 0.000 4.000 5 N -0.308 5.308 6 C 0.084 3.916 7 C -0.587 4.587 8 H 0.097 0.903 9 C -0.125 4.125 10 N -0.524 5.524 11 Si 0.690 3.310 12 H -0.198 1.198 13 H -0.208 1.208 14 H -0.183 1.183 15 C 0.314 3.686 16 O -0.429 6.429 17 C 0.004 3.996 18 H 0.136 0.864 19 C -0.231 4.231 20 O -0.196 6.196 21 C 0.106 3.894 22 C -0.219 4.219 23 C -0.082 4.082 24 C -0.174 4.174 25 C -0.024 4.024 26 Cl -0.043 7.043 27 C -0.168 4.168 28 H 0.055 0.945 29 H 0.101 0.899 30 H 0.055 0.945 31 H 0.072 0.928 32 H 0.068 0.932 33 H 0.111 0.889 34 H 0.111 0.889 35 H 0.069 0.931 36 H 0.044 0.956 37 H 0.077 0.923 38 H 0.088 0.912 39 H 0.090 0.910 40 H 0.103 0.897 41 H 0.159 0.841 42 H 0.153 0.847 43 H 0.150 0.850 44 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -7.025 4.831 -8.884 12.313 hybrid contribution -0.589 -0.859 -0.157 1.054 sum -7.614 3.971 -9.041 12.469 Atomic orbital electron populations 1.22694 0.81981 1.02371 0.99445 1.88005 1.18840 1.27732 1.95282 1.23063 0.95111 0.84812 1.00144 1.21402 0.90961 1.00154 0.87523 1.47700 1.64462 1.09265 1.09401 1.20004 0.98372 0.75467 0.97787 1.21425 0.94623 0.94048 1.48577 0.90349 1.24850 0.94987 0.98290 0.94340 1.69890 1.16576 1.18688 1.47259 0.87016 0.82623 0.82152 0.79190 1.19830 1.20774 1.18294 1.19777 0.77230 0.86790 0.84841 1.90634 1.53128 1.14070 1.85061 1.22369 0.96763 0.91874 0.88610 0.86400 1.22326 0.96820 1.02263 1.01699 1.86150 1.57250 1.35126 1.41116 1.18834 0.90015 0.91853 0.88697 1.21579 1.03928 0.94609 1.01814 1.20913 0.94076 0.99891 0.93340 1.20900 1.03154 0.90814 1.02515 1.20486 0.97038 0.90553 0.94336 1.98359 1.76577 1.62952 1.66377 1.20147 0.99622 1.00437 0.96560 0.94521 0.89935 0.94482 0.92750 0.93237 0.88858 0.88943 0.93133 0.95551 0.92289 0.91249 0.90955 0.89653 0.84082 0.84701 0.85032 0.84203 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.37 11.01 101.05 1.11 1.48 16 2 O -0.38 -5.96 9.72 -35.23 -0.34 -6.30 16 3 C 0.05 0.69 6.28 37.15 0.23 0.92 16 4 C 0.12 2.13 5.81 -4.05 -0.02 2.10 16 5 N -0.58 -11.48 2.41 -175.06 -0.42 -11.90 16 6 C 0.20 4.36 3.65 -5.19 -0.02 4.34 16 7 C -0.55 -14.00 9.55 -34.44 -0.33 -14.33 16 8 H 0.08 2.27 8.06 -52.48 -0.42 1.84 16 9 C 0.08 2.08 5.47 -17.82 -0.10 1.98 16 10 N -0.89 -25.12 13.96 55.43 0.77 -24.35 16 11 Si 0.86 19.03 27.47 -169.99 -4.67 14.37 16 12 H -0.27 -5.76 7.11 56.52 0.40 -5.36 16 13 H -0.28 -6.32 7.11 56.52 0.40 -5.92 16 14 H -0.26 -5.46 6.54 56.52 0.37 -5.09 16 15 C 0.53 10.77 6.93 -10.99 -0.08 10.69 16 16 O -0.55 -12.36 16.17 -13.71 -0.22 -12.58 16 17 C 0.06 1.15 1.79 -27.88 -0.05 1.10 16 18 H 0.12 2.27 4.92 -51.93 -0.26 2.02 16 19 C -0.17 -2.57 8.91 37.16 0.33 -2.24 16 20 O -0.28 -5.28 9.39 -38.67 -0.36 -5.64 16 21 C 0.15 2.51 6.58 -39.22 -0.26 2.25 16 22 C -0.20 -3.03 8.24 -39.43 -0.32 -3.35 16 23 C -0.06 -0.83 10.04 -39.61 -0.40 -1.23 16 24 C -0.15 -1.92 9.83 -39.53 -0.39 -2.31 16 25 C 0.00 0.03 6.32 -39.52 -0.25 -0.22 16 26 Cl -0.07 -0.85 28.95 -51.86 -1.50 -2.35 16 27 C -0.15 -2.21 9.77 -39.40 -0.38 -2.60 16 28 H 0.04 0.39 8.14 -51.92 -0.42 -0.03 16 29 H 0.08 0.86 8.14 -51.93 -0.42 0.43 16 30 H 0.04 0.36 8.14 -51.93 -0.42 -0.06 16 31 H 0.05 0.66 8.14 -51.93 -0.42 0.24 16 32 H 0.05 0.75 8.14 -51.93 -0.42 0.33 16 33 H 0.09 1.62 8.06 -51.93 -0.42 1.21 16 34 H 0.09 1.57 7.42 -51.93 -0.39 1.18 16 35 H 0.05 1.11 6.36 -51.93 -0.33 0.78 16 36 H 0.03 0.53 4.17 -51.93 -0.22 0.32 16 37 H 0.27 7.09 8.31 -40.82 -0.34 6.75 16 38 H 0.07 1.00 8.14 -51.93 -0.42 0.57 16 39 H 0.07 0.93 7.07 -51.93 -0.37 0.57 16 40 H 0.08 1.23 6.35 -51.93 -0.33 0.90 16 41 H 0.14 2.13 5.54 -52.49 -0.29 1.84 16 42 H 0.14 1.43 8.06 -52.48 -0.42 1.01 16 43 H 0.13 1.33 8.06 -52.48 -0.42 0.91 16 44 H 0.14 1.98 8.06 -52.49 -0.42 1.56 16 LS Contribution 378.29 15.07 5.70 5.70 Total: -1.00 -30.51 378.29 -7.96 -38.46 By element: Atomic # 1 Polarization: 12.00 SS G_CDS: -5.99 Total: 6.01 kcal Atomic # 6 Polarization: -0.50 SS G_CDS: -0.92 Total: -1.42 kcal Atomic # 7 Polarization: -36.60 SS G_CDS: 0.35 Total: -36.25 kcal Atomic # 8 Polarization: -23.59 SS G_CDS: -0.93 Total: -24.52 kcal Atomic # 14 Polarization: 19.03 SS G_CDS: -4.67 Total: 14.37 kcal Atomic # 17 Polarization: -0.85 SS G_CDS: -1.50 Total: -2.35 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -30.51 -7.96 -38.46 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000071140985.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.893 kcal (2) G-P(sol) polarization free energy of solvation -30.507 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.401 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.957 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.464 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.358 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds