Wall clock time and date at job start Tue Mar 31 2020 23:38:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 O 1.21298 * 119.99715 * 2 1 4 4 C 1.46787 * 120.00036 * 179.97438 * 2 1 3 5 5 C 1.40018 * 120.21772 * 0.02562 * 4 2 1 6 6 C 1.37778 * 119.86835 * 179.97438 * 5 4 2 7 7 Cl 1.73602 * 119.84627 * 180.02562 * 6 5 4 8 8 C 1.38719 * 120.31304 * 0.02746 * 6 5 4 9 9 C 1.38055 * 120.44144 * 359.67706 * 8 6 5 10 10 C 1.38687 * 120.12294 * 0.59680 * 9 8 6 11 11 O 1.35615 * 120.15838 * 179.70455 * 10 9 8 12 12 C 1.42903 * 116.99721 * 359.72518 * 11 10 9 13 13 C 1.53000 * 109.47039 * 180.02562 * 12 11 10 14 14 H 1.09003 * 109.47253 * 305.00429 * 13 12 11 15 15 O 1.42900 * 109.47194 * 64.99836 * 13 12 11 16 16 C 1.52998 * 109.47107 * 184.99933 * 13 12 11 17 17 N 1.46899 * 109.46858 * 175.04575 * 16 13 12 18 18 C 1.46903 * 110.99991 * 163.94840 * 17 16 13 19 19 C 1.46902 * 111.00138 * 287.89426 * 17 16 13 20 20 C 1.50702 * 109.47206 * 170.00004 * 19 17 16 21 21 H 1.07990 * 119.99891 * 0.02562 * 20 19 17 22 22 C 1.37878 * 119.99588 * 179.97438 * 20 19 17 23 23 N 1.31512 * 120.00136 * 0.02562 * 22 20 19 24 24 Si 1.86805 * 119.99737 * 180.02562 * 22 20 19 25 25 H 1.48502 * 109.47068 * 60.00158 * 24 22 20 26 26 H 1.48498 * 109.46985 * 180.02562 * 24 22 20 27 27 H 1.48499 * 109.46869 * 300.00247 * 24 22 20 28 28 H 1.09007 * 109.47001 * 240.00606 * 1 2 3 29 29 H 1.09003 * 109.47354 * 0.02562 * 1 2 3 30 30 H 1.08996 * 109.47176 * 120.00652 * 1 2 3 31 31 H 1.08003 * 120.06777 * 359.95716 * 5 4 2 32 32 H 1.08001 * 119.78545 * 179.97438 * 8 6 5 33 33 H 1.08001 * 119.94100 * 180.30399 * 9 8 6 34 34 H 1.08996 * 109.47308 * 60.00060 * 12 11 10 35 35 H 1.09001 * 109.46918 * 299.99929 * 12 11 10 36 36 H 0.96698 * 114.00266 * 60.00042 * 15 13 12 37 37 H 1.08997 * 109.47560 * 55.04389 * 16 13 12 38 38 H 1.08998 * 109.46907 * 295.04026 * 16 13 12 39 39 H 1.08998 * 109.47439 * 189.27288 * 18 17 16 40 40 H 1.08994 * 109.47470 * 69.26701 * 18 17 16 41 41 H 1.09004 * 109.46549 * 309.26905 * 18 17 16 42 42 H 1.08997 * 109.47475 * 290.00611 * 19 17 16 43 43 H 1.09000 * 109.46537 * 50.00068 * 19 17 16 44 44 H 0.97003 * 119.99947 * 179.97438 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1135 1.0505 0.0000 4 6 2.2410 -1.2712 0.0006 5 6 1.5455 -2.4865 0.0006 6 6 2.2416 -3.6754 0.0006 7 17 1.3788 -5.1818 -0.0001 8 6 3.6288 -3.6745 0.0011 9 6 4.3275 -2.4839 -0.0050 10 6 3.6453 -1.2764 0.0007 11 8 4.3309 -0.1064 0.0007 12 6 5.7575 -0.1905 0.0008 13 6 6.3515 1.2195 0.0015 14 1 5.9493 1.7836 -0.8401 15 8 6.0115 1.8790 1.2228 16 6 7.8738 1.1316 -0.1241 17 7 8.4341 2.4844 -0.2428 18 6 9.8803 2.4796 0.0149 19 6 8.1360 3.0641 -1.5592 20 6 8.5051 4.5252 -1.5600 21 1 8.9200 4.9777 -0.6716 22 6 8.3140 5.2839 -2.6953 23 7 7.8091 4.7326 -3.7773 24 14 8.7722 7.0949 -2.6964 25 1 10.2219 7.2389 -2.4085 26 1 8.4707 7.6809 -4.0272 27 1 7.9877 7.8046 -1.6543 28 1 -0.3633 -0.5138 0.8901 29 1 -0.3634 1.0277 -0.0005 30 1 -0.3633 -0.5139 -0.8899 31 1 0.4655 -2.4918 0.0009 32 1 4.1659 -4.6115 0.0016 33 1 5.4075 -2.4926 -0.0095 34 1 6.0900 -0.7248 -0.8891 35 1 6.0899 -0.7248 0.8909 36 1 6.3379 1.4316 2.0155 37 1 8.1324 0.5522 -1.0103 38 1 8.2838 0.6449 0.7607 39 1 10.2406 3.5060 0.0836 40 1 10.3929 1.9684 -0.7999 41 1 10.0806 1.9607 0.9524 42 1 8.7118 2.5435 -2.3244 43 1 7.0719 2.9580 -1.7703 44 1 7.6743 5.2665 -4.5759 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000414166743.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 23:38:57 Heat of formation + Delta-G solvation = -97.400179 kcal Electronic energy + Delta-G solvation = -27048.370767 eV Core-core repulsion = 22992.509233 eV Total energy + Delta-G solvation = -4055.861534 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 341.123 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -40.84761 -38.94201 -38.24326 -37.40697 -36.44768 -35.37654 -32.48863 -32.43380 -30.89885 -29.88893 -29.42961 -27.37437 -26.47545 -24.43070 -23.78076 -22.54710 -21.68226 -20.31710 -20.03236 -18.39530 -17.07059 -16.77759 -16.65104 -16.28137 -15.79415 -15.38934 -15.16675 -14.93648 -14.75520 -14.73521 -14.36356 -14.23255 -13.68994 -13.60315 -13.43624 -13.22075 -12.78238 -12.55215 -12.33184 -12.29875 -11.96163 -11.93189 -11.84054 -11.47103 -11.37349 -11.20034 -10.96222 -10.88062 -10.72662 -10.65039 -10.36477 -9.79031 -9.72585 -9.71314 -9.56399 -9.17025 -8.47933 -8.39371 -7.26219 -5.99406 -4.00082 0.30508 0.82571 1.75795 2.21140 2.84586 3.29506 3.37055 3.40926 3.44606 3.81026 4.23166 4.44407 4.44886 4.58480 4.61236 4.67931 4.89969 4.95409 4.97245 5.11788 5.13841 5.19195 5.27417 5.35968 5.36759 5.43279 5.46510 5.56316 5.63138 5.73351 5.90264 5.93754 6.02622 6.07079 6.29737 6.37919 6.68368 7.08586 7.25677 7.28356 7.53814 7.80196 8.05005 8.08829 8.18689 8.54293 9.06274 9.63701 11.11789 Molecular weight = 341.12amu Principal moments of inertia in cm(-1) A = 0.016168 B = 0.002330 C = 0.002169 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1731.375380 B =12012.582039 C =12903.773125 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C 0.383 3.617 3 O -0.418 6.418 4 C -0.197 4.197 5 C -0.026 4.026 6 C -0.094 4.094 7 Cl -0.070 7.070 8 C -0.037 4.037 9 C -0.214 4.214 10 C 0.196 3.804 11 O -0.263 6.263 12 C 0.020 3.980 13 C 0.118 3.882 14 H 0.117 0.883 15 O -0.529 6.529 16 C 0.030 3.970 17 N -0.531 5.531 18 C 0.042 3.958 19 C 0.191 3.809 20 C -0.505 4.505 21 H 0.063 0.937 22 C 0.055 3.945 23 N -0.900 5.900 24 Si 0.899 3.101 25 H -0.278 1.278 26 H -0.288 1.288 27 H -0.275 1.275 28 H 0.090 0.910 29 H 0.086 0.914 30 H 0.090 0.910 31 H 0.147 0.853 32 H 0.139 0.861 33 H 0.144 0.856 34 H 0.074 0.926 35 H 0.067 0.933 36 H 0.360 0.640 37 H 0.034 0.966 38 H 0.064 0.936 39 H 0.074 0.926 40 H 0.013 0.987 41 H 0.043 0.957 42 H -0.010 1.010 43 H 0.033 0.967 44 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.032 -21.805 9.103 26.516 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.255 4.255 2 C 0.258 3.742 3 O -0.291 6.291 4 C -0.199 4.199 5 C -0.045 4.045 6 C -0.121 4.121 7 Cl -0.041 7.041 8 C -0.056 4.056 9 C -0.233 4.233 10 C 0.146 3.854 11 O -0.172 6.172 12 C -0.056 4.056 13 C 0.058 3.942 14 H 0.135 0.865 15 O -0.331 6.331 16 C -0.099 4.099 17 N -0.255 5.255 18 C -0.107 4.107 19 C 0.066 3.934 20 C -0.544 4.544 21 H 0.081 0.919 22 C -0.146 4.146 23 N -0.539 5.539 24 Si 0.727 3.273 25 H -0.203 1.203 26 H -0.214 1.214 27 H -0.201 1.201 28 H 0.109 0.891 29 H 0.105 0.895 30 H 0.109 0.891 31 H 0.165 0.835 32 H 0.157 0.843 33 H 0.162 0.838 34 H 0.092 0.908 35 H 0.085 0.915 36 H 0.205 0.795 37 H 0.052 0.948 38 H 0.083 0.917 39 H 0.092 0.908 40 H 0.031 0.969 41 H 0.061 0.939 42 H 0.008 0.992 43 H 0.051 0.949 44 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -12.393 -20.364 8.846 25.427 hybrid contribution 0.998 -0.609 -0.500 1.272 sum -11.395 -20.973 8.346 25.286 Atomic orbital electron populations 1.22244 0.93762 1.05353 1.04126 1.22125 0.91417 0.87281 0.73331 1.90727 1.71595 1.33267 1.33501 1.19960 0.90847 0.95669 1.13397 1.21136 1.00466 0.89034 0.93865 1.20591 0.92459 0.87266 1.11738 1.98370 1.76824 1.31609 1.97339 1.21037 0.91937 0.98701 0.93941 1.21289 1.01133 0.91163 1.09748 1.19474 0.91071 0.85832 0.89013 1.86440 1.19824 1.25917 1.85053 1.23929 0.78339 1.01465 1.01895 1.21963 0.93148 0.89145 0.89968 0.86494 1.86794 1.79113 1.52934 1.14257 1.22572 0.94130 0.93087 1.00123 1.62015 1.11850 1.16124 1.35519 1.22190 0.88570 1.02205 0.97720 1.19826 0.96650 0.94844 0.82100 1.21084 1.41570 0.93935 0.97813 0.91892 1.24986 0.95417 0.98758 0.95481 1.69941 1.45057 1.36406 1.02537 0.86544 0.78802 0.84913 0.77066 1.20338 1.21377 1.20067 0.89140 0.89458 0.89098 0.83488 0.84277 0.83838 0.90819 0.91523 0.79465 0.94800 0.91721 0.90753 0.96883 0.93853 0.99230 0.94941 0.92882 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -1.52 8.93 36.01 0.32 -1.20 16 2 C 0.38 4.79 7.22 -30.85 -0.22 4.57 16 3 O -0.42 -7.40 15.89 -16.38 -0.26 -7.66 16 4 C -0.20 -2.24 5.88 -104.95 -0.62 -2.85 16 5 C -0.03 -0.22 9.24 -39.08 -0.36 -0.58 16 6 C -0.09 -0.79 6.31 -39.57 -0.25 -1.04 16 7 Cl -0.07 -0.53 28.94 -51.86 -1.50 -2.03 16 8 C -0.04 -0.30 9.81 -39.47 -0.39 -0.69 16 9 C -0.21 -2.04 9.03 -39.48 -0.36 -2.40 16 10 C 0.20 2.44 6.71 -38.59 -0.26 2.18 16 11 O -0.26 -4.02 8.17 -44.40 -0.36 -4.38 16 12 C 0.02 0.25 4.37 37.16 0.16 0.41 16 13 C 0.12 1.99 3.30 -26.73 -0.09 1.90 16 14 H 0.12 2.45 6.46 -51.93 -0.34 2.12 16 15 O -0.53 -9.47 13.25 -40.08 -0.53 -10.00 16 16 C 0.03 0.51 4.61 -3.83 -0.02 0.49 16 17 N -0.53 -11.42 4.66 -244.37 -1.14 -12.56 16 18 C 0.04 0.79 9.32 60.07 0.56 1.35 16 19 C 0.19 5.02 4.57 -4.97 -0.02 5.00 16 20 C -0.51 -14.54 8.58 -34.44 -0.30 -14.84 16 21 H 0.06 1.80 7.10 -52.49 -0.37 1.42 16 22 C 0.05 1.59 5.46 -17.82 -0.10 1.49 16 23 N -0.90 -27.27 13.29 55.43 0.74 -26.53 16 24 Si 0.90 22.22 29.54 -169.99 -5.02 17.20 16 25 H -0.28 -6.68 7.11 56.52 0.40 -6.28 16 26 H -0.29 -7.03 7.11 56.52 0.40 -6.63 16 27 H -0.28 -6.77 7.11 56.52 0.40 -6.37 16 28 H 0.09 0.48 8.09 -51.93 -0.42 0.06 16 29 H 0.09 0.71 8.12 -51.93 -0.42 0.29 16 30 H 0.09 0.51 8.09 -51.93 -0.42 0.09 16 31 H 0.15 0.84 7.05 -52.48 -0.37 0.47 16 32 H 0.14 0.82 8.06 -52.49 -0.42 0.40 16 33 H 0.14 1.10 6.30 -52.49 -0.33 0.77 16 34 H 0.07 0.83 7.65 -51.93 -0.40 0.43 16 35 H 0.07 0.65 7.67 -51.93 -0.40 0.25 16 36 H 0.36 4.69 9.05 45.56 0.41 5.10 16 37 H 0.03 0.55 8.05 -51.93 -0.42 0.13 16 38 H 0.06 0.87 7.82 -51.93 -0.41 0.47 16 39 H 0.07 1.52 7.02 -51.93 -0.36 1.16 16 40 H 0.01 0.24 8.07 -51.93 -0.42 -0.18 16 41 H 0.04 0.68 7.88 -51.93 -0.41 0.27 16 42 H -0.01 -0.28 8.07 -51.93 -0.42 -0.70 16 43 H 0.03 0.92 6.34 -51.93 -0.33 0.59 16 44 H 0.26 7.52 8.31 -40.82 -0.34 7.18 16 LS Contribution 383.56 15.07 5.78 5.78 Total: -1.00 -35.73 383.56 -9.60 -45.33 By element: Atomic # 1 Polarization: 6.42 SS G_CDS: -5.38 Total: 1.05 kcal Atomic # 6 Polarization: -4.27 SS G_CDS: -1.93 Total: -6.20 kcal Atomic # 7 Polarization: -38.69 SS G_CDS: -0.40 Total: -39.09 kcal Atomic # 8 Polarization: -20.89 SS G_CDS: -1.15 Total: -22.04 kcal Atomic # 14 Polarization: 22.22 SS G_CDS: -5.02 Total: 17.20 kcal Atomic # 17 Polarization: -0.53 SS G_CDS: -1.50 Total: -2.03 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -35.73 -9.60 -45.33 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000414166743.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.065 kcal (2) G-P(sol) polarization free energy of solvation -35.732 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.797 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.603 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.335 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.400 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds