Wall clock time and date at job start Tue Mar 31 2020 23:39:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 O 1.42905 * 109.46836 * 2 1 4 4 C 1.35997 * 116.99814 * 179.97438 * 3 2 1 5 5 C 1.38600 * 120.06673 * 0.26862 * 4 3 2 6 6 C 1.38230 * 120.01337 * 180.27345 * 5 4 3 7 7 C 1.50707 * 119.92032 * 179.72748 * 6 5 4 8 8 N 1.46897 * 109.47188 * 269.73100 * 7 6 5 9 9 C 1.47446 * 110.99737 * 290.12321 * 8 7 6 10 10 C 1.54318 * 107.23303 * 236.74038 * 9 8 7 11 11 C 1.55138 * 103.01792 * 337.71992 * 10 9 8 12 12 O 1.42904 * 110.98776 * 277.55634 * 11 10 9 13 13 C 1.50699 * 111.02139 * 153.76169 * 11 10 9 14 14 H 1.08001 * 119.99605 * 247.70739 * 13 11 10 15 15 C 1.37876 * 120.00690 * 67.70962 * 13 11 10 16 16 N 1.31516 * 119.99728 * 359.97438 * 15 13 11 17 17 Si 1.86793 * 120.00460 * 179.97438 * 15 13 11 18 18 H 1.48504 * 109.47183 * 60.00240 * 17 15 13 19 19 H 1.48499 * 109.47318 * 179.97438 * 17 15 13 20 20 H 1.48494 * 109.47449 * 300.00354 * 17 15 13 21 21 C 1.47840 * 110.99988 * 169.28145 * 8 7 6 22 22 C 1.38254 * 120.16037 * 359.45404 * 6 5 4 23 23 C 1.38332 * 120.12921 * 0.27247 * 22 6 5 24 24 Cl 1.73599 * 120.00959 * 179.97438 * 23 22 6 25 25 C 1.38668 * 119.98195 * 0.02562 * 23 22 6 26 26 O 1.36015 * 120.07784 * 179.97438 * 25 23 22 27 27 H 1.08998 * 109.47065 * 180.02562 * 1 2 3 28 28 H 1.08998 * 109.47404 * 299.99949 * 1 2 3 29 29 H 1.09002 * 109.47008 * 60.00741 * 1 2 3 30 30 H 1.08998 * 109.47404 * 240.00050 * 2 1 3 31 31 H 1.08996 * 109.47381 * 119.99419 * 2 1 3 32 32 H 1.07998 * 119.99199 * 0.02562 * 5 4 3 33 33 H 1.08995 * 109.47021 * 149.72778 * 7 6 5 34 34 H 1.09000 * 109.46711 * 29.72716 * 7 6 5 35 35 H 1.08996 * 109.88895 * 356.15286 * 9 8 7 36 36 H 1.09001 * 109.88694 * 117.33682 * 9 8 7 37 37 H 1.09003 * 110.70170 * 96.09788 * 10 9 8 38 38 H 1.09002 * 110.70518 * 219.33180 * 10 9 8 39 39 H 0.96695 * 114.00511 * 292.27000 * 12 11 10 40 40 H 0.96997 * 120.00260 * 179.97438 * 16 15 13 41 41 H 1.08998 * 110.37675 * 265.18757 * 21 8 7 42 42 H 1.08996 * 110.37806 * 27.53589 * 21 8 7 43 43 H 1.07998 * 119.93615 * 180.29458 * 22 6 5 44 44 H 0.96699 * 114.00160 * 90.00103 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0062 1.3473 0.0000 4 6 3.3545 1.5256 0.0005 5 6 4.2001 0.4274 -0.0046 6 6 5.5703 0.6098 0.0017 7 6 6.4878 -0.5858 0.0024 8 7 6.7852 -0.9741 1.3875 9 6 7.6457 0.0274 2.0438 10 6 8.9075 -0.7091 2.5404 11 6 8.4348 -2.1833 2.6411 12 8 7.7461 -2.4171 3.8712 13 6 9.5934 -3.1343 2.4853 14 1 9.6587 -3.7673 1.6126 15 6 10.5698 -3.1965 3.4566 16 7 10.4905 -2.4254 4.5191 17 14 12.0055 -4.3759 3.2637 18 1 12.7535 -4.0466 2.0238 19 1 12.9099 -4.2505 4.4348 20 1 11.4949 -5.7677 3.1788 21 6 7.4674 -2.2848 1.4355 22 6 6.1011 1.8863 0.0017 23 6 5.2630 2.9869 0.0011 24 17 5.9329 4.5884 0.0017 25 6 3.8876 2.8104 0.0010 26 8 3.0617 3.8911 0.0009 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3634 0.5138 0.8900 29 1 -0.3633 0.5137 -0.8901 30 1 1.8933 -0.5138 -0.8900 31 1 1.8933 -0.5137 0.8900 32 1 3.7883 -0.5710 -0.0094 33 1 7.4152 -0.3323 -0.5111 34 1 6.0031 -1.4159 -0.5115 35 1 7.9252 0.8015 1.3291 36 1 7.1193 0.4721 2.8884 37 1 9.7188 -0.6130 1.8189 38 1 9.2128 -0.3346 3.5175 39 1 8.3107 -2.3640 4.6544 40 1 11.1772 -2.4694 5.2027 41 1 6.7436 -3.0837 1.5961 42 1 8.0252 -2.4563 0.5149 43 1 7.1722 2.0246 0.0018 44 1 2.8229 4.2036 -0.8825 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000592522361.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 23:39:41 Heat of formation + Delta-G solvation = -106.455672 kcal Electronic energy + Delta-G solvation = -27714.280910 eV Core-core repulsion = 23658.026700 eV Total energy + Delta-G solvation = -4056.254209 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 341.123 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -40.66686 -38.70717 -38.12445 -36.86355 -36.46198 -34.59942 -32.14907 -32.06050 -31.21775 -29.86944 -28.79727 -28.01620 -25.60169 -24.25231 -23.98573 -21.96758 -21.72585 -20.00274 -19.56341 -18.77077 -17.66959 -17.05807 -16.73943 -16.40968 -15.58290 -15.28394 -15.12411 -14.93608 -14.74539 -14.28976 -14.16334 -13.81525 -13.34141 -12.95222 -12.88718 -12.86356 -12.78409 -12.46626 -12.17338 -11.92162 -11.67008 -11.52219 -11.44012 -11.26852 -11.20639 -11.14436 -10.85975 -10.76312 -10.68488 -10.67255 -10.49175 -10.28426 -9.89482 -9.26690 -8.72652 -8.60520 -8.29844 -8.07238 -7.68348 -6.24864 -4.33291 0.91376 1.14734 1.90920 3.02068 3.20889 3.26533 3.28566 3.34650 3.95330 4.26028 4.53949 4.68450 4.71969 4.83209 4.88700 4.96091 5.02000 5.03839 5.17204 5.30066 5.47488 5.50613 5.53735 5.64450 5.76594 5.77989 5.87332 5.93053 5.99165 6.07756 6.12072 6.37344 6.42913 6.45605 6.63240 6.83239 7.02965 7.03128 7.39882 7.44062 7.52775 7.56143 7.67405 7.79990 8.10201 8.68320 9.35980 9.59365 10.82227 Molecular weight = 341.12amu Principal moments of inertia in cm(-1) A = 0.014465 B = 0.002848 C = 0.002500 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1935.176485 B = 9830.784975 C =11196.306773 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C 0.050 3.950 3 O -0.305 6.305 4 C 0.118 3.882 5 C -0.171 4.171 6 C -0.018 4.018 7 C 0.084 3.916 8 N -0.520 5.520 9 C 0.044 3.956 10 C -0.148 4.148 11 C 0.254 3.746 12 O -0.581 6.581 13 C -0.538 4.538 14 H 0.061 0.939 15 C 0.071 3.929 16 N -0.896 5.896 17 Si 0.901 3.099 18 H -0.276 1.276 19 H -0.286 1.286 20 H -0.275 1.275 21 C 0.058 3.942 22 C -0.128 4.128 23 C -0.023 4.023 24 Cl -0.054 7.054 25 C 0.072 3.928 26 O -0.475 6.475 27 H 0.079 0.921 28 H 0.067 0.933 29 H 0.064 0.936 30 H 0.063 0.937 31 H 0.068 0.932 32 H 0.139 0.861 33 H 0.047 0.953 34 H 0.081 0.919 35 H 0.039 0.961 36 H 0.065 0.935 37 H 0.055 0.945 38 H 0.074 0.926 39 H 0.382 0.618 40 H 0.269 0.731 41 H 0.072 0.928 42 H 0.047 0.953 43 H 0.138 0.862 44 H 0.383 0.617 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.063 8.664 -11.955 20.390 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.025 4.025 3 O -0.219 6.219 4 C 0.071 3.929 5 C -0.191 4.191 6 C -0.019 4.019 7 C -0.044 4.044 8 N -0.244 5.244 9 C -0.084 4.084 10 C -0.187 4.187 11 C 0.213 3.787 12 O -0.390 6.390 13 C -0.576 4.576 14 H 0.079 0.921 15 C -0.131 4.131 16 N -0.536 5.536 17 Si 0.728 3.272 18 H -0.202 1.202 19 H -0.211 1.211 20 H -0.200 1.200 21 C -0.069 4.069 22 C -0.147 4.147 23 C -0.050 4.050 24 Cl -0.025 7.025 25 C 0.026 3.974 26 O -0.283 6.283 27 H 0.098 0.902 28 H 0.086 0.914 29 H 0.083 0.917 30 H 0.081 0.919 31 H 0.086 0.914 32 H 0.157 0.843 33 H 0.065 0.935 34 H 0.100 0.900 35 H 0.057 0.943 36 H 0.084 0.916 37 H 0.074 0.926 38 H 0.092 0.908 39 H 0.234 0.766 40 H 0.079 0.921 41 H 0.091 0.909 42 H 0.065 0.935 43 H 0.155 0.845 44 H 0.238 0.762 Dipole moment (debyes) X Y Z Total from point charges -15.019 8.833 -11.312 20.774 hybrid contribution 2.252 -0.417 -0.581 2.363 sum -12.767 8.417 -11.892 19.372 Atomic orbital electron populations 1.21760 0.92610 1.02913 1.03450 1.22876 0.95942 0.81738 1.01920 1.86117 1.17863 1.29469 1.88445 1.19075 0.83206 0.92717 0.97856 1.21133 0.93316 0.98165 1.06441 1.19618 0.93409 0.94101 0.94755 1.21225 0.96710 0.94265 0.92204 1.63664 1.44986 1.03490 1.12307 1.22887 0.94008 0.93707 0.97772 1.23297 0.94835 0.99292 1.01279 1.19476 0.87409 0.90002 0.81794 1.86099 1.41133 1.94358 1.17433 1.21536 1.06736 1.22731 1.06642 0.92098 1.25003 0.97937 0.95237 0.94915 1.69574 1.35625 1.38677 1.09736 0.86512 0.81646 0.81356 0.77640 1.20189 1.21104 1.20029 1.23032 0.95966 0.89631 0.98240 1.20874 1.00107 0.90225 1.03518 1.20947 0.91675 0.87148 1.05253 1.98368 1.84959 1.22431 1.96772 1.17208 0.87017 0.84750 1.08452 1.84937 1.66055 1.44399 1.32916 0.90247 0.91431 0.91672 0.91892 0.91402 0.84327 0.93537 0.90045 0.94294 0.91639 0.92624 0.90750 0.76646 0.92116 0.90946 0.93451 0.84457 0.76198 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.05 10.28 37.16 0.38 -0.67 16 2 C 0.05 0.45 5.46 37.16 0.20 0.66 16 3 O -0.31 -3.70 9.92 -34.26 -0.34 -4.04 16 4 C 0.12 1.53 6.70 -39.13 -0.26 1.27 16 5 C -0.17 -2.19 8.69 -39.45 -0.34 -2.54 16 6 C -0.02 -0.24 5.11 -104.62 -0.53 -0.78 16 7 C 0.08 1.24 4.75 -4.97 -0.02 1.21 16 8 N -0.52 -9.69 5.15 -232.70 -1.20 -10.89 16 9 C 0.04 0.85 6.26 -2.83 -0.02 0.83 16 10 C -0.15 -3.35 5.63 -24.91 -0.14 -3.49 16 11 C 0.25 6.20 0.89 -89.64 -0.08 6.12 16 12 O -0.58 -15.27 13.18 -35.23 -0.46 -15.73 16 13 C -0.54 -14.11 8.25 -34.44 -0.28 -14.40 16 14 H 0.06 1.57 7.77 -52.49 -0.41 1.16 16 15 C 0.07 1.86 5.29 -17.82 -0.09 1.76 16 16 N -0.90 -23.73 10.77 55.43 0.60 -23.13 16 17 Si 0.90 20.32 29.54 -169.99 -5.02 15.30 16 18 H -0.28 -6.18 7.11 56.52 0.40 -5.78 16 19 H -0.29 -6.40 7.11 56.52 0.40 -6.00 16 20 H -0.27 -6.20 7.11 56.52 0.40 -5.79 16 21 C 0.06 1.21 5.86 -2.30 -0.01 1.20 16 22 C -0.13 -1.72 8.51 -39.54 -0.34 -2.06 16 23 C -0.02 -0.30 6.33 -39.39 -0.25 -0.55 16 24 Cl -0.05 -0.66 28.50 -51.86 -1.48 -2.14 16 25 C 0.07 0.95 6.71 -39.10 -0.26 0.69 16 26 O -0.47 -5.68 12.75 -34.31 -0.44 -6.12 16 27 H 0.08 0.42 8.14 -51.93 -0.42 -0.01 16 28 H 0.07 0.50 8.14 -51.93 -0.42 0.08 16 29 H 0.06 0.43 8.14 -51.93 -0.42 0.01 16 30 H 0.06 0.49 7.65 -51.93 -0.40 0.09 16 31 H 0.07 0.63 7.67 -51.93 -0.40 0.23 16 32 H 0.14 1.57 6.30 -52.49 -0.33 1.24 16 33 H 0.05 0.67 7.90 -51.93 -0.41 0.26 16 34 H 0.08 1.07 8.01 -51.93 -0.42 0.65 16 35 H 0.04 0.67 5.49 -51.93 -0.29 0.38 16 36 H 0.07 1.33 8.14 -51.93 -0.42 0.91 16 37 H 0.05 1.27 8.03 -51.93 -0.42 0.85 16 38 H 0.07 1.81 7.83 -51.93 -0.41 1.40 16 39 H 0.38 10.26 6.93 45.56 0.32 10.57 16 40 H 0.27 6.83 8.31 -40.82 -0.34 6.49 16 41 H 0.07 1.53 8.14 -51.93 -0.42 1.11 16 42 H 0.05 0.94 7.68 -51.93 -0.40 0.54 16 43 H 0.14 1.78 6.91 -52.49 -0.36 1.41 16 44 H 0.38 2.84 9.06 45.56 0.41 3.26 16 LS Contribution 372.12 15.07 5.61 5.61 Total: -1.00 -29.26 372.12 -9.54 -38.80 By element: Atomic # 1 Polarization: 17.82 SS G_CDS: -4.75 Total: 13.07 kcal Atomic # 6 Polarization: -8.68 SS G_CDS: -2.06 Total: -10.73 kcal Atomic # 7 Polarization: -33.42 SS G_CDS: -0.60 Total: -34.02 kcal Atomic # 8 Polarization: -24.64 SS G_CDS: -1.24 Total: -25.88 kcal Atomic # 14 Polarization: 20.32 SS G_CDS: -5.02 Total: 15.30 kcal Atomic # 17 Polarization: -0.66 SS G_CDS: -1.48 Total: -2.14 kcal Total LS contribution 5.61 Total: 5.61 kcal Total: -29.26 -9.54 -38.80 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000592522361.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.656 kcal (2) G-P(sol) polarization free energy of solvation -29.261 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.916 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.539 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.800 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.456 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds