Wall clock time and date at job start Tue Mar 31 2020 23:48:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 O 1.45199 * 109.46828 * 2 1 4 4 C 1.34232 * 116.99568 * 180.02562 * 3 2 1 5 5 O 1.20829 * 120.00234 * 359.97438 * 4 3 2 6 6 C 1.50698 * 120.00126 * 179.97438 * 4 3 2 7 7 H 1.09001 * 109.46948 * 59.99500 * 6 4 3 8 8 C 1.53001 * 109.47042 * 300.00318 * 6 4 3 9 9 C 1.50699 * 109.47076 * 175.00087 * 8 6 4 10 10 C 1.38264 * 119.99683 * 89.99539 * 9 8 6 11 11 C 1.38220 * 120.02583 * 179.97438 * 10 9 8 12 12 C 1.38232 * 120.01498 * 0.02562 * 11 10 9 13 13 C 1.38335 * 119.98779 * 359.97438 * 12 11 10 14 14 Cl 1.73595 * 120.01468 * 179.72696 * 13 12 11 15 15 C 1.38189 * 119.99118 * 269.99129 * 9 8 6 16 16 N 1.46895 * 109.47658 * 179.97438 * 6 4 3 17 17 C 1.46901 * 110.99894 * 275.00430 * 16 6 4 18 18 C 1.53007 * 109.47044 * 179.97438 * 17 16 6 19 19 H 1.08999 * 109.46777 * 59.99649 * 18 17 16 20 20 O 1.42899 * 109.46758 * 299.99719 * 18 17 16 21 21 C 1.50697 * 109.47195 * 179.97438 * 18 17 16 22 22 H 1.08005 * 120.00046 * 359.97438 * 21 18 17 23 23 C 1.37875 * 120.00026 * 180.02562 * 21 18 17 24 24 N 1.31508 * 120.00115 * 359.97438 * 23 21 18 25 25 Si 1.86807 * 119.99906 * 180.02562 * 23 21 18 26 26 H 1.48495 * 109.46945 * 89.99607 * 25 23 21 27 27 H 1.48494 * 109.46815 * 210.00006 * 25 23 21 28 28 H 1.48504 * 109.46835 * 329.99670 * 25 23 21 29 29 H 1.08997 * 109.47038 * 180.02562 * 1 2 3 30 30 H 1.08998 * 109.46900 * 300.00187 * 1 2 3 31 31 H 1.09003 * 109.46943 * 60.00375 * 1 2 3 32 32 H 1.08993 * 109.47237 * 239.99478 * 2 1 3 33 33 H 1.09003 * 109.46943 * 119.99625 * 2 1 3 34 34 H 1.08997 * 109.47749 * 54.99614 * 8 6 4 35 35 H 1.09003 * 109.46923 * 294.99536 * 8 6 4 36 36 H 1.08001 * 119.98449 * 359.97438 * 10 9 8 37 37 H 1.08002 * 119.99055 * 179.97438 * 11 10 9 38 38 H 1.08002 * 120.00683 * 180.02562 * 12 11 10 39 39 H 1.08001 * 120.01014 * 359.97438 * 15 9 8 40 40 H 1.00900 * 111.00169 * 151.04541 * 16 6 4 41 41 H 1.09001 * 109.46933 * 299.99188 * 17 16 6 42 42 H 1.08993 * 109.47799 * 59.99606 * 17 16 6 43 43 H 0.96701 * 113.99884 * 300.00110 * 20 18 17 44 44 H 0.97000 * 120.00412 * 180.02562 * 24 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0808 0.5866 -0.0005 6 6 3.9208 2.9374 -0.0012 7 1 3.5851 3.4698 0.8888 8 6 3.4488 3.6840 -1.2504 9 6 3.9230 5.1132 -1.1907 10 6 5.1486 5.4579 -1.7298 11 6 5.5839 6.7687 -1.6758 12 6 4.7943 7.7356 -1.0822 13 6 3.5680 7.3913 -0.5426 14 17 2.5790 8.6038 0.2093 15 6 3.1327 6.0789 -0.5971 16 7 5.3878 2.8605 -0.0010 17 6 5.9071 2.7142 1.3653 18 6 7.4347 2.6371 1.3247 19 1 7.8328 3.5493 0.8803 20 8 7.8341 1.5115 0.5401 21 6 7.9676 2.4876 2.7263 22 1 7.2850 2.4516 3.5626 23 6 9.3265 2.3978 2.9413 24 7 10.1577 2.4421 1.9231 25 14 9.9870 2.2118 4.6788 26 1 10.0891 0.7696 5.0177 27 1 11.3308 2.8375 4.7671 28 1 9.0660 2.8805 5.6327 29 1 -0.3633 -1.0276 0.0005 30 1 -0.3633 0.5139 0.8900 31 1 -0.3633 0.5138 -0.8900 32 1 1.8934 -0.5139 -0.8899 33 1 1.8934 -0.5138 0.8900 34 1 2.3599 3.6640 -1.2960 35 1 3.8584 3.2021 -2.1382 36 1 5.7660 4.7027 -2.1933 37 1 6.5416 7.0372 -2.0968 38 1 5.1344 8.7598 -1.0405 39 1 2.1751 5.8097 -0.1763 40 1 5.7920 3.6645 -0.4574 41 1 5.6021 3.5726 1.9638 42 1 5.5094 1.8018 1.8095 43 1 7.5144 0.6635 0.8777 44 1 11.1137 2.3786 2.0743 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000931398343.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 23:48:47 Heat of formation + Delta-G solvation = -123.022857 kcal Electronic energy + Delta-G solvation = -27567.948951 eV Core-core repulsion = 23510.976335 eV Total energy + Delta-G solvation = -4056.972617 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 341.123 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -40.49286 -39.58261 -37.24404 -36.59672 -36.02616 -35.00889 -32.42202 -31.99810 -31.80696 -30.87698 -29.49863 -27.26483 -25.17083 -24.09656 -23.00343 -22.64300 -21.53176 -20.54609 -20.30013 -17.62414 -17.19845 -16.93577 -16.44343 -16.15801 -15.77040 -15.67260 -15.11152 -14.60680 -14.53592 -14.09630 -13.94172 -13.80859 -13.77768 -13.42787 -13.26229 -13.01706 -12.88836 -12.55883 -12.13641 -12.04828 -11.88149 -11.71297 -11.59360 -11.46185 -11.40797 -11.09671 -11.00478 -10.90435 -10.75208 -10.69588 -10.48789 -10.14116 -10.03151 -9.06772 -8.97735 -8.81499 -8.55197 -8.08984 -7.87987 -5.97378 -4.15386 0.97892 1.08074 1.95628 2.46185 2.67407 3.29831 3.36511 3.39026 3.45507 4.32615 4.41475 4.53220 4.68360 4.80503 4.81688 4.87917 4.88499 4.96302 5.11124 5.16542 5.16940 5.23392 5.30632 5.34937 5.57423 5.62716 5.65859 5.69059 5.79712 5.83653 6.03421 6.14432 6.17693 6.22339 6.34107 6.49827 6.56383 6.63426 6.85417 7.34799 7.66070 7.82819 7.89419 8.06063 8.23190 8.87803 9.51198 9.68004 11.06854 Molecular weight = 341.12amu Principal moments of inertia in cm(-1) A = 0.006641 B = 0.004034 C = 0.002823 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 4215.249807 B = 6939.296750 C = 9914.635821 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C 0.061 3.939 3 O -0.367 6.367 4 C 0.459 3.541 5 O -0.471 6.471 6 C 0.103 3.897 7 H 0.078 0.922 8 C -0.078 4.078 9 C -0.075 4.075 10 C -0.109 4.109 11 C -0.099 4.099 12 C -0.112 4.112 13 C -0.033 4.033 14 Cl -0.075 7.075 15 C -0.106 4.106 16 N -0.659 5.659 17 C 0.034 3.966 18 C 0.239 3.761 19 H 0.051 0.949 20 O -0.553 6.553 21 C -0.573 4.573 22 H 0.054 0.946 23 C 0.081 3.919 24 N -0.858 5.858 25 Si 0.888 3.112 26 H -0.279 1.279 27 H -0.285 1.285 28 H -0.274 1.274 29 H 0.077 0.923 30 H 0.065 0.935 31 H 0.065 0.935 32 H 0.068 0.932 33 H 0.068 0.932 34 H 0.093 0.907 35 H 0.092 0.908 36 H 0.138 0.862 37 H 0.136 0.864 38 H 0.132 0.868 39 H 0.134 0.866 40 H 0.349 0.651 41 H 0.024 0.976 42 H 0.064 0.936 43 H 0.346 0.654 44 H 0.260 0.740 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -19.075 6.488 -8.054 21.699 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.013 4.013 3 O -0.285 6.285 4 C 0.298 3.702 5 O -0.354 6.354 6 C -0.009 4.009 7 H 0.095 0.905 8 C -0.116 4.116 9 C -0.075 4.075 10 C -0.127 4.127 11 C -0.117 4.117 12 C -0.131 4.131 13 C -0.059 4.059 14 Cl -0.046 7.046 15 C -0.124 4.124 16 N -0.295 5.295 17 C -0.095 4.095 18 C 0.181 3.819 19 H 0.068 0.932 20 O -0.355 6.355 21 C -0.611 4.611 22 H 0.072 0.928 23 C -0.125 4.125 24 N -0.494 5.494 25 Si 0.715 3.285 26 H -0.205 1.205 27 H -0.211 1.211 28 H -0.199 1.199 29 H 0.095 0.905 30 H 0.084 0.916 31 H 0.084 0.916 32 H 0.087 0.913 33 H 0.086 0.914 34 H 0.111 0.889 35 H 0.110 0.890 36 H 0.156 0.844 37 H 0.154 0.846 38 H 0.150 0.850 39 H 0.151 0.849 40 H 0.173 0.827 41 H 0.042 0.958 42 H 0.082 0.918 43 H 0.190 0.810 44 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges -18.442 6.077 -8.545 21.214 hybrid contribution -0.039 0.344 1.936 1.967 sum -18.481 6.421 -6.609 20.651 Atomic orbital electron populations 1.21792 0.92908 1.02752 1.03332 1.22950 0.95010 0.80706 1.02593 1.86476 1.25197 1.32015 1.84837 1.23780 0.80070 0.92919 0.73411 1.90696 1.60009 1.42322 1.42339 1.20976 0.92065 0.88647 0.99219 0.90470 1.20729 1.02246 0.90657 0.97966 1.19728 0.94666 0.94908 0.98196 1.21365 0.95435 0.96916 0.98965 1.21185 0.99668 0.92547 0.98308 1.21094 0.92817 1.00684 0.98506 1.20888 0.93780 0.90201 1.01068 1.98368 1.69851 1.55596 1.80833 1.20935 1.00743 0.90722 1.00027 1.60110 1.00469 1.47631 1.21311 1.23037 1.01170 0.99415 0.85860 1.19228 0.84548 0.87426 0.90728 0.93162 1.86516 1.78439 1.15924 1.54655 1.21620 0.92203 1.54272 0.93032 0.92799 1.25000 0.97023 0.93944 0.96563 1.70076 1.02582 1.46998 1.29738 0.86688 0.78315 0.78370 0.85085 1.20511 1.21114 1.19908 0.90462 0.91595 0.91596 0.91346 0.91386 0.88864 0.88955 0.84397 0.84618 0.84982 0.84857 0.82741 0.95798 0.91797 0.81017 0.93030 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.13 10.29 37.16 0.38 -0.75 16 2 C 0.06 0.67 6.19 37.16 0.23 0.89 16 3 O -0.37 -4.77 10.03 -39.26 -0.39 -5.16 16 4 C 0.46 7.18 7.14 36.00 0.26 7.43 16 5 O -0.47 -9.10 15.67 -18.75 -0.29 -9.39 16 6 C 0.10 1.48 2.54 -68.87 -0.18 1.30 16 7 H 0.08 1.08 7.80 -51.93 -0.40 0.67 16 8 C -0.08 -0.86 4.94 -27.88 -0.14 -1.00 16 9 C -0.07 -0.83 4.84 -104.63 -0.51 -1.33 16 10 C -0.11 -1.22 8.04 -39.58 -0.32 -1.54 16 11 C -0.10 -1.04 10.05 -39.59 -0.40 -1.44 16 12 C -0.11 -1.18 9.83 -39.55 -0.39 -1.56 16 13 C -0.03 -0.36 6.32 -39.49 -0.25 -0.61 16 14 Cl -0.08 -0.78 28.96 -51.86 -1.50 -2.28 16 15 C -0.11 -1.14 9.49 -39.55 -0.38 -1.51 16 16 N -0.66 -11.73 5.71 -107.95 -0.62 -12.35 16 17 C 0.03 0.71 4.98 -3.82 -0.02 0.69 16 18 C 0.24 6.14 3.03 -27.88 -0.08 6.05 16 19 H 0.05 1.39 8.14 -51.93 -0.42 0.97 16 20 O -0.55 -14.92 12.60 -35.23 -0.44 -15.37 16 21 C -0.57 -15.98 8.76 -34.44 -0.30 -16.28 16 22 H 0.05 1.47 7.74 -52.48 -0.41 1.07 16 23 C 0.08 2.29 5.40 -17.82 -0.10 2.19 16 24 N -0.86 -25.60 12.84 55.43 0.71 -24.88 16 25 Si 0.89 21.44 29.54 -169.99 -5.02 16.42 16 26 H -0.28 -6.70 7.11 56.52 0.40 -6.29 16 27 H -0.29 -6.81 7.11 56.52 0.40 -6.41 16 28 H -0.27 -6.50 7.11 56.52 0.40 -6.10 16 29 H 0.08 0.45 8.14 -51.93 -0.42 0.02 16 30 H 0.06 0.49 8.14 -51.93 -0.42 0.06 16 31 H 0.06 0.46 8.14 -51.93 -0.42 0.04 16 32 H 0.07 0.74 8.13 -51.93 -0.42 0.32 16 33 H 0.07 0.77 8.13 -51.93 -0.42 0.35 16 34 H 0.09 0.86 7.94 -51.93 -0.41 0.45 16 35 H 0.09 1.01 8.09 -51.93 -0.42 0.59 16 36 H 0.14 1.51 7.53 -52.49 -0.40 1.11 16 37 H 0.14 1.18 8.06 -52.49 -0.42 0.76 16 38 H 0.13 1.16 8.06 -52.49 -0.42 0.74 16 39 H 0.13 1.24 8.06 -52.49 -0.42 0.82 16 40 H 0.35 5.88 5.50 -39.29 -0.22 5.66 16 41 H 0.02 0.49 8.05 -51.93 -0.42 0.07 16 42 H 0.06 1.42 7.62 -51.93 -0.40 1.02 16 43 H 0.35 8.81 9.04 45.56 0.41 9.23 16 44 H 0.26 7.34 8.31 -40.82 -0.34 7.00 16 LS Contribution 389.12 15.07 5.86 5.86 Total: -1.00 -32.99 389.12 -9.47 -42.46 By element: Atomic # 1 Polarization: 17.74 SS G_CDS: -5.60 Total: 12.14 kcal Atomic # 6 Polarization: -5.27 SS G_CDS: -2.18 Total: -7.45 kcal Atomic # 7 Polarization: -37.33 SS G_CDS: 0.10 Total: -37.23 kcal Atomic # 8 Polarization: -28.79 SS G_CDS: -1.13 Total: -29.92 kcal Atomic # 14 Polarization: 21.44 SS G_CDS: -5.02 Total: 16.42 kcal Atomic # 17 Polarization: -0.78 SS G_CDS: -1.50 Total: -2.28 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -32.99 -9.47 -42.46 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000931398343.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -80.561 kcal (2) G-P(sol) polarization free energy of solvation -32.990 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.551 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.472 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.462 kcal (6) G-S(sol) free energy of system = (1) + (5) -123.023 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds